RNA–Protein interactions for RNA: ENST00000558670.1

GCHFR-203, Transcript of GTP cyclohydrolase I feedback regulator, humanhuman

TSL 3 BASIC

Gene GCHFR, Length 412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCHFR-203ENST00000558670 NISCHQ9Y2I1 1504 aa37.3■■■■□ 3.56
GCHFR-203ENST00000558670 ABCC9O60706 1549 aa33.82■■■■□ 3
GCHFR-203ENST00000558670 CCDC180Q9P1Z9 1646 aa33.66■■■□□ 2.98
GCHFR-203ENST00000558670 RB1CC1Q8TDY2 1594 aa32.15■■■□□ 2.74
GCHFR-203ENST00000558670 NACADO15069 1562 aa31.85■■■□□ 2.69
GCHFR-203ENST00000558670 DNAJC5BQ9UF47 199 aa31.79■■■□□ 2.68
GCHFR-203ENST00000558670 DCAF8L2P0C7V8 631 aa31.58■■■□□ 2.65
GCHFR-203ENST00000558670 PABPN1Q86U42 306 aaKnown RBP eCLIP31.39■■■□□ 2.62
GCHFR-203ENST00000558670 UNC13AQ9UPW8 1703 aa31.37■■■□□ 2.61
GCHFR-203ENST00000558670 MYO15BQ96JP2 1530 aa31.32■■■□□ 2.6
GCHFR-203ENST00000558670 BICRAQ9NZM4 1560 aa31.12■■■□□ 2.57
GCHFR-203ENST00000558670 ZCCHC6Q5VYS8 1495 aaKnown RBP30.88■■■□□ 2.53
GCHFR-203ENST00000558670 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
GCHFR-203ENST00000558670 SHROOM4Q9ULL8 1493 aa30.81■■■□□ 2.52
GCHFR-203ENST00000558670 SCRIBQ14160 1630 aa30.62■■■□□ 2.49
GCHFR-203ENST00000558670 CC2D2AQ9P2K1 1620 aa30.56■■■□□ 2.48
GCHFR-203ENST00000558670 CECR2Q9BXF3 1484 aa30.51■■■□□ 2.48
GCHFR-203ENST00000558670 EIF4G1Q04637 1599 aaKnown RBP30.44■■■□□ 2.46
GCHFR-203ENST00000558670 DNAJC5Q9H3Z4 198 aa29.47■■■□□ 2.31
GCHFR-203ENST00000558670 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
GCHFR-203ENST00000558670 CUX2O14529 1486 aa29.31■■■□□ 2.28
GCHFR-203ENST00000558670 ERCC6Q03468 1493 aa29.3■■■□□ 2.28
GCHFR-203ENST00000558670 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
GCHFR-203ENST00000558670 SMARCA2P51531 1590 aa29.21■■■□□ 2.27
GCHFR-203ENST00000558670 SMARCA4P51532 1647 aa29.18■■■□□ 2.26
GCHFR-203ENST00000558670 HMGXB3Q12766 1538 aa29.17■■■□□ 2.26
GCHFR-203ENST00000558670 BAZ1AQ9NRL2 1556 aaPredicted RBP29.03■■■□□ 2.24
GCHFR-203ENST00000558670 BAZ1BQ9UIG0 1483 aaKnown RBP28.99■■■□□ 2.23
GCHFR-203ENST00000558670 NESP48681 1621 aa28.94■■■□□ 2.22
GCHFR-203ENST00000558670 PEG3Q9GZU2 1588 aa28.88■■■□□ 2.21
GCHFR-203ENST00000558670 LAMC3Q9Y6N6 1575 aa28.8■■■□□ 2.2
GCHFR-203ENST00000558670 THOC2Q8NI27 1593 aaKnown RBP28.76■■■□□ 2.19
GCHFR-203ENST00000558670 MROH2BQ7Z745 1585 aa28.71■■■□□ 2.19
GCHFR-203ENST00000558670 PDS5BQ9NTI5 1447 aa28.64■■■□□ 2.18
GCHFR-203ENST00000558670 KIF21AQ7Z4S6 1674 aa28.63■■■□□ 2.17
GCHFR-203ENST00000558670 CADPSQ9ULU8 1353 aa28.46■■■□□ 2.15
GCHFR-203ENST00000558670 MRC2Q9UBG0 1479 aa28.4■■■□□ 2.14
GCHFR-203ENST00000558670 WIZO95785 1651 aa28.38■■■□□ 2.13
GCHFR-203ENST00000558670 WDR62O43379 1518 aa28.33■■■□□ 2.13
GCHFR-203ENST00000558670 CEP164Q9UPV0 1460 aa28.26■■■□□ 2.11
GCHFR-203ENST00000558670 FANCD2Q9BXW9 1451 aa28.16■■■□□ 2.1
GCHFR-203ENST00000558670 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
GCHFR-203ENST00000558670 CFTRP13569 1480 aa28.08■■■□□ 2.09
GCHFR-203ENST00000558670 TOP2AP11388 1531 aaKnown RBP28.05■■■□□ 2.08
GCHFR-203ENST00000558670 RSF1Q96T23 1441 aaPredicted RBP28.01■■■□□ 2.08
GCHFR-203ENST00000558670 URB2Q14146 1524 aaKnown RBP27.91■■■□□ 2.06
GCHFR-203ENST00000558670 PRDM2Q13029 1718 aa27.88■■■□□ 2.05
GCHFR-203ENST00000558670 OSCARQ8IYS5 282 aa27.88■■■□□ 2.05
GCHFR-203ENST00000558670 IFT140Q96RY7 1462 aa27.68■■■□□ 2.02
GCHFR-203ENST00000558670 CCDC88BA6NC98 1476 aa27.66■■■□□ 2.02
GCHFR-203ENST00000558670 TOPBP1Q92547 1522 aa27.59■■■□□ 2.01
GCHFR-203ENST00000558670 ZNF608Q9ULD9 1512 aaPredicted RBP27.59■■■□□ 2.01
GCHFR-203ENST00000558670 ABCC8Q09428 1581 aa27.57■■■□□ 2
GCHFR-203ENST00000558670 RIMBP3CA6NJZ7 1639 aa27.56■■■□□ 2
GCHFR-203ENST00000558670 RIMBP3BA6NNM3 1639 aa27.56■■■□□ 2
GCHFR-203ENST00000558670 RIMBP3Q9UFD9 1639 aa27.56■■■□□ 2
GCHFR-203ENST00000558670 EIF4G3O43432 1585 aaKnown RBP27.51■■□□□ 1.99
GCHFR-203ENST00000558670 DNMBPQ6XZF7 1577 aa27.51■■□□□ 1.99
GCHFR-203ENST00000558670 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
GCHFR-203ENST00000558670 TARBP1Q13395 1621 aaKnown RBP27.35■■□□□ 1.97
GCHFR-203ENST00000558670 CHD1O14646 1710 aa27.35■■□□□ 1.97
GCHFR-203ENST00000558670 AQRO60306 1485 aaKnown RBP eCLIP27.31■■□□□ 1.96
GCHFR-203ENST00000558670 POLA1P09884 1462 aaPredicted RBP27.29■■□□□ 1.96
GCHFR-203ENST00000558670 FBLN2P98095 1184 aa27.23■■□□□ 1.95
GCHFR-203ENST00000558670 CYB5RLQ6IPT4 315 aa27.23■■□□□ 1.95
GCHFR-203ENST00000558670 RAD54L2Q9Y4B4 1467 aa27.16■■□□□ 1.94
GCHFR-203ENST00000558670 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
GCHFR-203ENST00000558670 SOGA1O94964 1423 aa27.16■■□□□ 1.94
GCHFR-203ENST00000558670 ARAP1Q96P48 1450 aa27.14■■□□□ 1.94
GCHFR-203ENST00000558670 TDRD9Q8NDG6 1382 aaKnown RBP27.1■■□□□ 1.93
GCHFR-203ENST00000558670 FGD5Q6ZNL6 1462 aa27.1■■□□□ 1.93
GCHFR-203ENST00000558670 SNAPC4Q5SXM2 1469 aa27.08■■□□□ 1.93
GCHFR-203ENST00000558670 SUPT5HO00267 1087 aaKnown RBP27.07■■□□□ 1.92
GCHFR-203ENST00000558670 TRHP20396 242 aaPredicted RBP27.06■■□□□ 1.92
GCHFR-203ENST00000558670 SYNJ1O43426 1573 aa27.03■■□□□ 1.92
GCHFR-203ENST00000558670 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
GCHFR-203ENST00000558670 CUX1P39880 1505 aa27■■□□□ 1.91
GCHFR-203ENST00000558670 CHMP7Q8WUX9 453 aaPredicted RBP27■■□□□ 1.91
GCHFR-203ENST00000558670 CLASP1Q7Z460 1538 aa27■■□□□ 1.91
GCHFR-203ENST00000558670 GRIN2BQ13224 1484 aa26.99■■□□□ 1.91
GCHFR-203ENST00000558670 SYNJ2O15056 1496 aa26.93■■□□□ 1.9
GCHFR-203ENST00000558670 PBRM1Q86U86 1689 aa26.89■■□□□ 1.9
GCHFR-203ENST00000558670 GAPVD1Q14C86 1478 aa26.84■■□□□ 1.89
GCHFR-203ENST00000558670 ABCA5Q8WWZ7 1642 aa26.77■■□□□ 1.88
GCHFR-203ENST00000558670 ABCA10Q8WWZ4 1543 aa26.77■■□□□ 1.88
GCHFR-203ENST00000558670 WRNQ14191 1432 aaPredicted RBP eCLIP26.64■■□□□ 1.85
GCHFR-203ENST00000558670 GRIN2AQ12879 1464 aa26.63■■□□□ 1.85
GCHFR-203ENST00000558670 ADAMTS12P58397 1594 aa26.61■■□□□ 1.85
GCHFR-203ENST00000558670 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
GCHFR-203ENST00000558670 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
GCHFR-203ENST00000558670 NUP160Q12769 1436 aa26.53■■□□□ 1.84
GCHFR-203ENST00000558670 CEP170Q5SW79 1584 aa26.53■■□□□ 1.84
GCHFR-203ENST00000558670 ERCC6L2Q5T890 1561 aa26.5■■□□□ 1.83
GCHFR-203ENST00000558670 FHAD1B1AJZ9 1412 aa26.5■■□□□ 1.83
GCHFR-203ENST00000558670 AEBP2Q6ZN18 517 aaPredicted RBP26.5■■□□□ 1.83
GCHFR-203ENST00000558670 ERICH3Q5RHP9 1530 aa26.46■■□□□ 1.83
GCHFR-203ENST00000558670 SHROOM2Q13796 1616 aa26.46■■□□□ 1.83
GCHFR-203ENST00000558670 PRG4Q92954 1404 aaPredicted RBP26.3■■□□□ 1.8
GCHFR-203ENST00000558670 RUSC2Q8N2Y8 1516 aa26.24■■□□□ 1.79
GCHFR-203ENST00000558670 JPH4Q96JJ6 628 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms