RNA–Protein interactions for RNA: ENST00000371873.9

CMPK1-203, Transcript of cytidine/uridine monophosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMPK1, Length 2,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMPK1-203ENST00000371873 NISCHQ9Y2I1 1504 aa33.46■■■□□ 2.95
CMPK1-203ENST00000371873 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.26
CMPK1-203ENST00000371873 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
CMPK1-203ENST00000371873 CCDC180Q9P1Z9 1646 aa28.47■■■□□ 2.15
CMPK1-203ENST00000371873 ZCCHC6Q5VYS8 1495 aaKnown RBP28.03■■■□□ 2.08
CMPK1-203ENST00000371873 ABCC9O60706 1549 aa28.01■■■□□ 2.08
CMPK1-203ENST00000371873 SUPT5HO00267 1087 aaKnown RBP27.83■■■□□ 2.05
CMPK1-203ENST00000371873 SCRIBQ14160 1630 aa27.19■■□□□ 1.94
CMPK1-203ENST00000371873 DCAF1Q9Y4B6 1507 aa27.04■■□□□ 1.92
CMPK1-203ENST00000371873 PABPN1Q86U42 306 aaKnown RBP eCLIP26.88■■□□□ 1.89
CMPK1-203ENST00000371873 NACADO15069 1562 aa26.72■■□□□ 1.87
CMPK1-203ENST00000371873 RB1CC1Q8TDY2 1594 aa26.6■■□□□ 1.85
CMPK1-203ENST00000371873 MYO15BQ96JP2 1530 aa26.51■■□□□ 1.83
CMPK1-203ENST00000371873 CECR2Q9BXF3 1484 aa26.47■■□□□ 1.83
CMPK1-203ENST00000371873 RSF1Q96T23 1441 aaPredicted RBP26.29■■□□□ 1.8
CMPK1-203ENST00000371873 CHIC1Q5VXU3 224 aa26.19■■□□□ 1.78
CMPK1-203ENST00000371873 MROH2BQ7Z745 1585 aa26.15■■□□□ 1.78
CMPK1-203ENST00000371873 UNC13AQ9UPW8 1703 aa26.1■■□□□ 1.77
CMPK1-203ENST00000371873 EHMT2Q96KQ7 1210 aa26.06■■□□□ 1.76
CMPK1-203ENST00000371873 WIZO95785 1651 aa25.96■■□□□ 1.75
CMPK1-203ENST00000371873 FAM9AQ8IZU1 332 aaPredicted RBP25.9■■□□□ 1.74
CMPK1-203ENST00000371873 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
CMPK1-203ENST00000371873 LOC105371045A0A1W2PR82 267 aa25.74■■□□□ 1.71
CMPK1-203ENST00000371873 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
CMPK1-203ENST00000371873 BAZ1AQ9NRL2 1556 aaPredicted RBP25.72■■□□□ 1.71
CMPK1-203ENST00000371873 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
CMPK1-203ENST00000371873 CCDC88BA6NC98 1476 aa25.42■■□□□ 1.66
CMPK1-203ENST00000371873 ATAD2BQ9ULI0 1458 aa25.31■■□□□ 1.64
CMPK1-203ENST00000371873 TOP2AP11388 1531 aaKnown RBP25.3■■□□□ 1.64
CMPK1-203ENST00000371873 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
CMPK1-203ENST00000371873 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
CMPK1-203ENST00000371873 EIF4G1Q04637 1599 aaKnown RBP25.21■■□□□ 1.63
CMPK1-203ENST00000371873 SMARCA2P51531 1590 aa25.21■■□□□ 1.63
CMPK1-203ENST00000371873 DNAJC5BQ9UF47 199 aa25.14■■□□□ 1.62
CMPK1-203ENST00000371873 RANGAP1P46060 587 aaPredicted RBP25■■□□□ 1.59
CMPK1-203ENST00000371873 PPARGC1BQ86YN6 1023 aaKnown RBP24.98■■□□□ 1.59
CMPK1-203ENST00000371873 PEG3Q9GZU2 1588 aa24.89■■□□□ 1.58
CMPK1-203ENST00000371873 TTBK1Q5TCY1 1321 aaPredicted RBP24.89■■□□□ 1.57
CMPK1-203ENST00000371873 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
CMPK1-203ENST00000371873 SOGA1O94964 1423 aa24.86■■□□□ 1.57
CMPK1-203ENST00000371873 NCAPD3P42695 1498 aa24.84■■□□□ 1.57
CMPK1-203ENST00000371873 PCGF6Q9BYE7 350 aa24.83■■□□□ 1.57
CMPK1-203ENST00000371873 RUSC2Q8N2Y8 1516 aa24.81■■□□□ 1.56
CMPK1-203ENST00000371873 WRNQ14191 1432 aaPredicted RBP eCLIP24.79■■□□□ 1.56
CMPK1-203ENST00000371873 UBTFP17480 764 aaKnown RBP24.79■■□□□ 1.56
CMPK1-203ENST00000371873 CSRNP3Q8WYN3 585 aa24.63■■□□□ 1.53
CMPK1-203ENST00000371873 NESP48681 1621 aa24.62■■□□□ 1.53
CMPK1-203ENST00000371873 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
CMPK1-203ENST00000371873 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
CMPK1-203ENST00000371873 CADPSQ9ULU8 1353 aa24.51■■□□□ 1.51
CMPK1-203ENST00000371873 CFTRP13569 1480 aa24.45■■□□□ 1.5
CMPK1-203ENST00000371873 CUX1P39880 1505 aa24.34■■□□□ 1.49
CMPK1-203ENST00000371873 FANCD2Q9BXW9 1451 aa24.3■■□□□ 1.48
CMPK1-203ENST00000371873 RAPGEF2Q9Y4G8 1499 aa24.21■■□□□ 1.47
CMPK1-203ENST00000371873 CEP162Q5TB80 1403 aa24.2■■□□□ 1.46
CMPK1-203ENST00000371873 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
CMPK1-203ENST00000371873 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
CMPK1-203ENST00000371873 CUX2O14529 1486 aa24.17■■□□□ 1.46
CMPK1-203ENST00000371873 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
CMPK1-203ENST00000371873 P3H3Q8IVL6 736 aa24.14■■□□□ 1.46
CMPK1-203ENST00000371873 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.45
CMPK1-203ENST00000371873 GOLGA3Q08378 1498 aa24.1■■□□□ 1.45
CMPK1-203ENST00000371873 TDRD9Q8NDG6 1382 aaKnown RBP24.09■■□□□ 1.45
CMPK1-203ENST00000371873 EEA1Q15075 1411 aa24.08■■□□□ 1.44
CMPK1-203ENST00000371873 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
CMPK1-203ENST00000371873 ATP1B4Q9UN42 357 aaPredicted RBP24.07■■□□□ 1.44
CMPK1-203ENST00000371873 TNIKQ9UKE5 1360 aa24.05■■□□□ 1.44
CMPK1-203ENST00000371873 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
CMPK1-203ENST00000371873 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
CMPK1-203ENST00000371873 PDS5BQ9NTI5 1447 aa23.98■■□□□ 1.43
CMPK1-203ENST00000371873 CLIP1P30622 1438 aa23.97■■□□□ 1.43
CMPK1-203ENST00000371873 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
CMPK1-203ENST00000371873 URB2Q14146 1524 aaKnown RBP23.95■■□□□ 1.42
CMPK1-203ENST00000371873 IGF1RP08069 1367 aa23.94■■□□□ 1.42
CMPK1-203ENST00000371873 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
CMPK1-203ENST00000371873 APLP2Q06481 763 aa23.92■■□□□ 1.42
CMPK1-203ENST00000371873 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.42
CMPK1-203ENST00000371873 ERCC6Q03468 1493 aa23.88■■□□□ 1.41
CMPK1-203ENST00000371873 KIF21AQ7Z4S6 1674 aa23.87■■□□□ 1.41
CMPK1-203ENST00000371873 FBLN2P98095 1184 aa23.87■■□□□ 1.41
CMPK1-203ENST00000371873 LAMC3Q9Y6N6 1575 aa23.85■■□□□ 1.41
CMPK1-203ENST00000371873 PRDM2Q13029 1718 aa23.8■■□□□ 1.4
CMPK1-203ENST00000371873 PRXQ9BXM0 1461 aa23.8■■□□□ 1.4
CMPK1-203ENST00000371873 ARID3CA6NKF2 412 aa23.8■■□□□ 1.4
CMPK1-203ENST00000371873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.8■■□□□ 1.4
CMPK1-203ENST00000371873 HNRNPUL2Q1KMD3 747 aaKnown RBP23.8■■□□□ 1.4
CMPK1-203ENST00000371873 AQRO60306 1485 aaKnown RBP eCLIP23.79■■□□□ 1.4
CMPK1-203ENST00000371873 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
CMPK1-203ENST00000371873 HRCP23327 699 aa23.77■■□□□ 1.4
CMPK1-203ENST00000371873 KIF21BO75037 1637 aa23.76■■□□□ 1.39
CMPK1-203ENST00000371873 ITGAEP38570 1179 aa23.7■■□□□ 1.38
CMPK1-203ENST00000371873 KANK4Q5T7N3 995 aaPredicted RBP23.7■■□□□ 1.38
CMPK1-203ENST00000371873 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.37
CMPK1-203ENST00000371873 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
CMPK1-203ENST00000371873 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
CMPK1-203ENST00000371873 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
CMPK1-203ENST00000371873 VPS8Q8N3P4 1428 aa23.59■■□□□ 1.37
CMPK1-203ENST00000371873 MRC2Q9UBG0 1479 aa23.59■■□□□ 1.37
CMPK1-203ENST00000371873 CCER1Q8TC90 406 aaPredicted RBP23.56■■□□□ 1.36
CMPK1-203ENST00000371873 FHOD3Q2V2M9 1422 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms