Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC105233.6-201ENST00000642093 218 ntBASIC13.09□□□□□ -0.31
SFTPBP07988 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SFTPBP07988 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.09□□□□□ -0.31
SFTPBP07988 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.09□□□□□ -0.31
SFTPBP07988 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SFTPBP07988 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SFTPBP07988 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.09□□□□□ -0.31
SFTPBP07988 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SFTPBP07988 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.09□□□□□ -0.31
SFTPBP07988 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.09□□□□□ -0.31
SFTPBP07988 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SFTPBP07988 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.09□□□□□ -0.31
SFTPBP07988 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
SFTPBP07988 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SFTPBP07988 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SFTPBP07988 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SFTPBP07988 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.09□□□□□ -0.31
SFTPBP07988 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
SFTPBP07988 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SFTPBP07988 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SFTPBP07988 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SFTPBP07988 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SFTPBP07988 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
SFTPBP07988 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.08□□□□□ -0.32
SFTPBP07988 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.08□□□□□ -0.32
SFTPBP07988 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.08□□□□□ -0.32
SFTPBP07988 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SFTPBP07988 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.08□□□□□ -0.32
SFTPBP07988 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 SPDYE19P-201ENST00000338590 713 ntBASIC13.08□□□□□ -0.32
SFTPBP07988 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SFTPBP07988 AC104457.1-201ENST00000401024 814 ntBASIC13.08□□□□□ -0.32
SFTPBP07988 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.08□□□□□ -0.32
SFTPBP07988 AC114501.2-201ENST00000439631 535 ntBASIC13.08□□□□□ -0.32
SFTPBP07988 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.08□□□□□ -0.32
SFTPBP07988 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SFTPBP07988 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.08□□□□□ -0.32
SFTPBP07988 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 DOC2GP-202ENST00000514950 1163 ntBASIC13.08□□□□□ -0.32
SFTPBP07988 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.08□□□□□ -0.32
SFTPBP07988 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.08□□□□□ -0.32
SFTPBP07988 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 AL662799.1-202ENST00000614205 422 ntBASIC13.08□□□□□ -0.32
SFTPBP07988 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.08□□□□□ -0.32
SFTPBP07988 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.08□□□□□ -0.32
SFTPBP07988 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.08□□□□□ -0.32
SFTPBP07988 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SFTPBP07988 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.08□□□□□ -0.32
SFTPBP07988 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.08□□□□□ -0.32
SFTPBP07988 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.08□□□□□ -0.32
SFTPBP07988 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SFTPBP07988 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SFTPBP07988 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
SFTPBP07988 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.08□□□□□ -0.32
SFTPBP07988 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SFTPBP07988 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.08□□□□□ -0.32
SFTPBP07988 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SFTPBP07988 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SFTPBP07988 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.07□□□□□ -0.32
SFTPBP07988 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
SFTPBP07988 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.07□□□□□ -0.32
SFTPBP07988 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.07□□□□□ -0.32
SFTPBP07988 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.07□□□□□ -0.32
SFTPBP07988 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.07□□□□□ -0.32
SFTPBP07988 AC006504.5-208ENST00000588784 2401 ntBASIC13.07□□□□□ -0.32
SFTPBP07988 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.07□□□□□ -0.32
SFTPBP07988 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SFTPBP07988 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.07□□□□□ -0.32
SFTPBP07988 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms