RNA–Protein interactions for RNA: ENST00000338590.8

SPDYE19P-201, Transcript of speedy/RINGO cell cycle regulator family member E19, pseudogene, humanhuman

BASIC

Gene SPDYE19P, Length 713 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE19P-201ENST00000338590 NISCHQ9Y2I1 1504 aa38.65■■■■□ 3.78
SPDYE19P-201ENST00000338590 CCDC180Q9P1Z9 1646 aa34.43■■■■□ 3.1
SPDYE19P-201ENST00000338590 ABCC9O60706 1549 aa34.08■■■■□ 3.05
SPDYE19P-201ENST00000338590 DCAF8L2P0C7V8 631 aa32.61■■■□□ 2.81
SPDYE19P-201ENST00000338590 RB1CC1Q8TDY2 1594 aa32.58■■■□□ 2.81
SPDYE19P-201ENST00000338590 NACADO15069 1562 aa32.45■■■□□ 2.79
SPDYE19P-201ENST00000338590 ZCCHC6Q5VYS8 1495 aaKnown RBP32.11■■■□□ 2.73
SPDYE19P-201ENST00000338590 MYO15BQ96JP2 1530 aa32.1■■■□□ 2.73
SPDYE19P-201ENST00000338590 DCAF1Q9Y4B6 1507 aa31.89■■■□□ 2.7
SPDYE19P-201ENST00000338590 UNC13AQ9UPW8 1703 aa31.86■■■□□ 2.69
SPDYE19P-201ENST00000338590 PABPN1Q86U42 306 aaKnown RBP eCLIP31.85■■■□□ 2.69
SPDYE19P-201ENST00000338590 BICRAQ9NZM4 1560 aa31.6■■■□□ 2.65
SPDYE19P-201ENST00000338590 DNAJC5BQ9UF47 199 aa31.54■■■□□ 2.64
SPDYE19P-201ENST00000338590 SCRIBQ14160 1630 aa31.5■■■□□ 2.63
SPDYE19P-201ENST00000338590 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.57
SPDYE19P-201ENST00000338590 EIF4G1Q04637 1599 aaKnown RBP30.8■■■□□ 2.52
SPDYE19P-201ENST00000338590 CC2D2AQ9P2K1 1620 aa30.76■■■□□ 2.52
SPDYE19P-201ENST00000338590 CECR2Q9BXF3 1484 aa30.61■■■□□ 2.49
SPDYE19P-201ENST00000338590 SMARCA4P51532 1647 aa30.05■■■□□ 2.4
SPDYE19P-201ENST00000338590 BAZ1AQ9NRL2 1556 aaPredicted RBP29.97■■■□□ 2.39
SPDYE19P-201ENST00000338590 ATAD2BQ9ULI0 1458 aa29.96■■■□□ 2.39
SPDYE19P-201ENST00000338590 NCAPD3P42695 1498 aa29.95■■■□□ 2.39
SPDYE19P-201ENST00000338590 SMARCA2P51531 1590 aa29.89■■■□□ 2.38
SPDYE19P-201ENST00000338590 MROH2BQ7Z745 1585 aa29.82■■■□□ 2.36
SPDYE19P-201ENST00000338590 HMGXB3Q12766 1538 aa29.76■■■□□ 2.36
SPDYE19P-201ENST00000338590 BAZ1BQ9UIG0 1483 aaKnown RBP29.72■■■□□ 2.35
SPDYE19P-201ENST00000338590 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
SPDYE19P-201ENST00000338590 WIZO95785 1651 aa29.5■■■□□ 2.31
SPDYE19P-201ENST00000338590 NESP48681 1621 aa29.41■■■□□ 2.3
SPDYE19P-201ENST00000338590 ERCC6Q03468 1493 aa29.39■■■□□ 2.3
SPDYE19P-201ENST00000338590 RSF1Q96T23 1441 aaPredicted RBP29.37■■■□□ 2.29
SPDYE19P-201ENST00000338590 LAMC3Q9Y6N6 1575 aa29.21■■■□□ 2.27
SPDYE19P-201ENST00000338590 TOP2AP11388 1531 aaKnown RBP29.12■■■□□ 2.25
SPDYE19P-201ENST00000338590 CADPSQ9ULU8 1353 aa29.11■■■□□ 2.25
SPDYE19P-201ENST00000338590 CUX2O14529 1486 aa29.08■■■□□ 2.25
SPDYE19P-201ENST00000338590 PDS5BQ9NTI5 1447 aa29.05■■■□□ 2.24
SPDYE19P-201ENST00000338590 KIF21AQ7Z4S6 1674 aa29.02■■■□□ 2.24
SPDYE19P-201ENST00000338590 THOC2Q8NI27 1593 aaKnown RBP28.94■■■□□ 2.22
SPDYE19P-201ENST00000338590 CFTRP13569 1480 aa28.85■■■□□ 2.21
SPDYE19P-201ENST00000338590 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
SPDYE19P-201ENST00000338590 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
SPDYE19P-201ENST00000338590 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
SPDYE19P-201ENST00000338590 CEP164Q9UPV0 1460 aa28.77■■■□□ 2.2
SPDYE19P-201ENST00000338590 WDR62O43379 1518 aa28.65■■■□□ 2.18
SPDYE19P-201ENST00000338590 PRDM2Q13029 1718 aa28.6■■■□□ 2.17
SPDYE19P-201ENST00000338590 SUPT5HO00267 1087 aaKnown RBP28.59■■■□□ 2.17
SPDYE19P-201ENST00000338590 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
SPDYE19P-201ENST00000338590 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.15
SPDYE19P-201ENST00000338590 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
SPDYE19P-201ENST00000338590 ABCC8Q09428 1581 aa28.23■■■□□ 2.11
SPDYE19P-201ENST00000338590 DNMBPQ6XZF7 1577 aa28.21■■■□□ 2.11
SPDYE19P-201ENST00000338590 IFT140Q96RY7 1462 aa28.15■■■□□ 2.1
SPDYE19P-201ENST00000338590 ZNF608Q9ULD9 1512 aaPredicted RBP28.1■■■□□ 2.09
SPDYE19P-201ENST00000338590 POLA1P09884 1462 aaPredicted RBP28.02■■■□□ 2.08
SPDYE19P-201ENST00000338590 CUX1P39880 1505 aa27.98■■■□□ 2.07
SPDYE19P-201ENST00000338590 TARBP1Q13395 1621 aaKnown RBP27.98■■■□□ 2.07
SPDYE19P-201ENST00000338590 RAD54L2Q9Y4B4 1467 aa27.96■■■□□ 2.07
SPDYE19P-201ENST00000338590 EIF4G3O43432 1585 aaKnown RBP27.94■■■□□ 2.06
SPDYE19P-201ENST00000338590 SOGA1O94964 1423 aa27.94■■■□□ 2.06
SPDYE19P-201ENST00000338590 FGD5Q6ZNL6 1462 aa27.94■■■□□ 2.06
SPDYE19P-201ENST00000338590 AQRO60306 1485 aaKnown RBP eCLIP27.93■■■□□ 2.06
SPDYE19P-201ENST00000338590 OSCARQ8IYS5 282 aa27.92■■■□□ 2.06
SPDYE19P-201ENST00000338590 TDRD9Q8NDG6 1382 aaKnown RBP27.85■■■□□ 2.05
SPDYE19P-201ENST00000338590 FBLN2P98095 1184 aa27.73■■■□□ 2.03
SPDYE19P-201ENST00000338590 WRNQ14191 1432 aaPredicted RBP eCLIP27.71■■■□□ 2.03
SPDYE19P-201ENST00000338590 CHD1O14646 1710 aa27.67■■■□□ 2.02
SPDYE19P-201ENST00000338590 WDR97A6NE52 1622 aa27.67■■■□□ 2.02
SPDYE19P-201ENST00000338590 SYNJ1O43426 1573 aa27.66■■■□□ 2.02
SPDYE19P-201ENST00000338590 TOP2BQ02880 1626 aa27.64■■■□□ 2.02
SPDYE19P-201ENST00000338590 SNAPC4Q5SXM2 1469 aa27.64■■■□□ 2.01
SPDYE19P-201ENST00000338590 BIVM-ERCC5R4GMW8 1640 aa27.63■■■□□ 2.01
SPDYE19P-201ENST00000338590 TRIM41Q8WV44 630 aa27.63■■■□□ 2.01
SPDYE19P-201ENST00000338590 ABCA10Q8WWZ4 1543 aa27.62■■■□□ 2.01
SPDYE19P-201ENST00000338590 GRIN2BQ13224 1484 aa27.61■■■□□ 2.01
SPDYE19P-201ENST00000338590 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
SPDYE19P-201ENST00000338590 CHMP7Q8WUX9 453 aaPredicted RBP27.55■■■□□ 2
SPDYE19P-201ENST00000338590 PBRM1Q86U86 1689 aa27.54■■■□□ 2
SPDYE19P-201ENST00000338590 MAGI1Q96QZ7 1491 aaPredicted RBP27.54■■■□□ 2
SPDYE19P-201ENST00000338590 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
SPDYE19P-201ENST00000338590 RIMBP3CA6NJZ7 1639 aa27.47■■□□□ 1.99
SPDYE19P-201ENST00000338590 RIMBP3BA6NNM3 1639 aa27.47■■□□□ 1.99
SPDYE19P-201ENST00000338590 RIMBP3Q9UFD9 1639 aa27.47■■□□□ 1.99
SPDYE19P-201ENST00000338590 SYNJ2O15056 1496 aa27.45■■□□□ 1.99
SPDYE19P-201ENST00000338590 ARHGEF11O15085 1522 aa27.43■■□□□ 1.98
SPDYE19P-201ENST00000338590 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
SPDYE19P-201ENST00000338590 ADAMTS12P58397 1594 aa27.29■■□□□ 1.96
SPDYE19P-201ENST00000338590 CYB5RLQ6IPT4 315 aa27.28■■□□□ 1.96
SPDYE19P-201ENST00000338590 ERICH3Q5RHP9 1530 aa27.27■■□□□ 1.96
SPDYE19P-201ENST00000338590 GRIN2AQ12879 1464 aa27.25■■□□□ 1.95
SPDYE19P-201ENST00000338590 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
SPDYE19P-201ENST00000338590 ARAP1Q96P48 1450 aa27.19■■□□□ 1.94
SPDYE19P-201ENST00000338590 KIF27Q86VH2 1401 aa27.15■■□□□ 1.94
SPDYE19P-201ENST00000338590 CEP170Q5SW79 1584 aa27.14■■□□□ 1.94
SPDYE19P-201ENST00000338590 NUP160Q12769 1436 aa27.12■■□□□ 1.93
SPDYE19P-201ENST00000338590 IGF1RP08069 1367 aa27.09■■□□□ 1.93
SPDYE19P-201ENST00000338590 ERCC6L2Q5T890 1561 aa26.98■■□□□ 1.91
SPDYE19P-201ENST00000338590 CUL7Q14999 1698 aa26.98■■□□□ 1.91
SPDYE19P-201ENST00000338590 SHROOM2Q13796 1616 aa26.93■■□□□ 1.9
SPDYE19P-201ENST00000338590 CARMIL1Q5VZK9 1371 aa26.93■■□□□ 1.9
SPDYE19P-201ENST00000338590 JPH4Q96JJ6 628 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms