RNA–Protein interactions for RNA: ENST00000401393.7

INO80-202, Transcript of INO80 complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene INO80, Length 5,991 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-202ENST00000401393 DCAF8L2P0C7V8 631 aa24.64■■□□□ 1.53
INO80-202ENST00000401393 SUPT5HO00267 1087 aaKnown RBP22.72■■□□□ 1.23
INO80-202ENST00000401393 EHMT2Q96KQ7 1210 aa22.44■■□□□ 1.18
INO80-202ENST00000401393 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
INO80-202ENST00000401393 FAM9AQ8IZU1 332 aaPredicted RBP21.96■■□□□ 1.11
INO80-202ENST00000401393 APLP2Q06481 763 aa21.93■■□□□ 1.1
INO80-202ENST00000401393 NISCHQ9Y2I1 1504 aa21.84■■□□□ 1.09
INO80-202ENST00000401393 TTBK1Q5TCY1 1321 aaPredicted RBP21.58■■□□□ 1.05
INO80-202ENST00000401393 RANGAP1P46060 587 aaPredicted RBP21.56■■□□□ 1.04
INO80-202ENST00000401393 ATP1B4Q9UN42 357 aaPredicted RBP21.47■■□□□ 1.03
INO80-202ENST00000401393 PELP1Q8IZL8 1130 aaKnown RBP21.42■■□□□ 1.02
INO80-202ENST00000401393 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
INO80-202ENST00000401393 MYT1LQ9UL68 1186 aa20.98■□□□□ 0.95
INO80-202ENST00000401393 UBTFP17480 764 aaKnown RBP20.96■□□□□ 0.95
INO80-202ENST00000401393 TRIM41Q8WV44 630 aa20.95■□□□□ 0.94
INO80-202ENST00000401393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.78■□□□□ 0.92
INO80-202ENST00000401393 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
INO80-202ENST00000401393 CCER1Q8TC90 406 aaPredicted RBP20.71■□□□□ 0.91
INO80-202ENST00000401393 ERICH6Q7L0X2 663 aa20.66■□□□□ 0.9
INO80-202ENST00000401393 CHIC1Q5VXU3 224 aa20.64■□□□□ 0.89
INO80-202ENST00000401393 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
INO80-202ENST00000401393 PPARGC1BQ86YN6 1023 aaKnown RBP20.44■□□□□ 0.86
INO80-202ENST00000401393 ITGAEP38570 1179 aa20.43■□□□□ 0.86
INO80-202ENST00000401393 CENPBP07199 599 aaPredicted RBP20.42■□□□□ 0.86
INO80-202ENST00000401393 NEFLP07196 543 aa20.36■□□□□ 0.85
INO80-202ENST00000401393 SLC4A1APQ9BWU0 796 aaKnown RBP20.31■□□□□ 0.84
INO80-202ENST00000401393 ZEB1P37275 1124 aaPredicted RBP20.3■□□□□ 0.84
INO80-202ENST00000401393 YTHDC1Q96MU7 727 aaKnown RBP20.28■□□□□ 0.84
INO80-202ENST00000401393 CNGB1Q14028 1251 aaPredicted RBP20.28■□□□□ 0.84
INO80-202ENST00000401393 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.79
INO80-202ENST00000401393 FBLN2P98095 1184 aa20■□□□□ 0.79
INO80-202ENST00000401393 DAXXQ9UER7 740 aaPredicted RBP19.98■□□□□ 0.79
INO80-202ENST00000401393 ABCC9O60706 1549 aa19.81■□□□□ 0.76
INO80-202ENST00000401393 BCANQ96GW7 911 aa19.81■□□□□ 0.76
INO80-202ENST00000401393 FAM50AQ14320 339 aaKnown RBP19.81■□□□□ 0.76
INO80-202ENST00000401393 TRIM52Q96A61 297 aa19.8■□□□□ 0.76
INO80-202ENST00000401393 SLC24A1O60721 1099 aa19.73■□□□□ 0.75
INO80-202ENST00000401393 TRIM26Q12899 539 aaPredicted RBP19.7■□□□□ 0.74
INO80-202ENST00000401393 CLSPNQ9HAW4 1339 aa19.69■□□□□ 0.74
INO80-202ENST00000401393 LOC105371045A0A1W2PR82 267 aa19.69■□□□□ 0.74
INO80-202ENST00000401393 ZNF326Q5BKZ1 582 aaKnown RBP19.65■□□□□ 0.74
INO80-202ENST00000401393 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.73
INO80-202ENST00000401393 ARID3CA6NKF2 412 aa19.6■□□□□ 0.73
INO80-202ENST00000401393 MYT1Q01538 1121 aa19.56■□□□□ 0.72
INO80-202ENST00000401393 ESF1Q9H501 851 aaKnown RBP19.55■□□□□ 0.72
INO80-202ENST00000401393 NEUROD1Q13562 356 aa19.54■□□□□ 0.72
INO80-202ENST00000401393 BCL11AQ9H165 835 aa19.51■□□□□ 0.71
INO80-202ENST00000401393 ZBTB47Q9UFB7 747 aaPredicted RBP19.46■□□□□ 0.71
INO80-202ENST00000401393 ZNF316A6NFI3 1004 aaPredicted RBP19.45■□□□□ 0.7
INO80-202ENST00000401393 P3H3Q8IVL6 736 aa19.42■□□□□ 0.7
INO80-202ENST00000401393 ZNF777Q9ULD5 760 aaPredicted RBP19.41■□□□□ 0.7
INO80-202ENST00000401393 HRCP23327 699 aa19.38■□□□□ 0.69
INO80-202ENST00000401393 NEFMP07197 916 aa19.37■□□□□ 0.69
INO80-202ENST00000401393 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
INO80-202ENST00000401393 NPM1P06748 294 aaKnown RBP eCLIP19.35■□□□□ 0.69
INO80-202ENST00000401393 CHGAP10645 457 aaKnown RBP19.3■□□□□ 0.68
INO80-202ENST00000401393 CANXP27824 592 aaKnown RBP19.25■□□□□ 0.67
INO80-202ENST00000401393 CDK11AQ9UQ88 783 aaPredicted RBP19.17■□□□□ 0.66
INO80-202ENST00000401393 RTL5Q5HYW3 569 aaPredicted RBP19.16■□□□□ 0.66
INO80-202ENST00000401393 SCAF1Q9H7N4 1312 aaKnown RBP19.13■□□□□ 0.65
INO80-202ENST00000401393 ANP32CO43423 234 aa19.12■□□□□ 0.65
INO80-202ENST00000401393 A0A0G2JS52 829 aa19.1■□□□□ 0.65
INO80-202ENST00000401393 DIEXFQ68CQ4 756 aaKnown RBP19.09■□□□□ 0.65
INO80-202ENST00000401393 PLEKHG5O94827 1062 aa18.99■□□□□ 0.63
INO80-202ENST00000401393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.637e-7■■■□□ 17.2
INO80-202ENST00000401393 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
INO80-202ENST00000401393 CSRNP3Q8WYN3 585 aa18.89■□□□□ 0.61
INO80-202ENST00000401393 ZBTB7CA1YPR0 619 aa18.88■□□□□ 0.61
INO80-202ENST00000401393 C14orf37Q86TY3 774 aa18.86■□□□□ 0.61
INO80-202ENST00000401393 CHMP7Q8WUX9 453 aaPredicted RBP18.86■□□□□ 0.61
INO80-202ENST00000401393 NPM2Q86SE8 214 aaKnown RBP18.82■□□□□ 0.6
INO80-202ENST00000401393 CHIC2Q9UKJ5 165 aa18.79■□□□□ 0.6
INO80-202ENST00000401393 ARID4BQ4LE39 1312 aaPredicted RBP18.79■□□□□ 0.6
INO80-202ENST00000401393 HAP1P54257 671 aaPredicted RBP18.76■□□□□ 0.59
INO80-202ENST00000401393 PPP1R15AO75807 674 aaPredicted RBP18.76■□□□□ 0.59
INO80-202ENST00000401393 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
INO80-202ENST00000401393 TSPY4P0CV99 314 aa18.75■□□□□ 0.59
INO80-202ENST00000401393 TSPY10P0CW01 314 aa18.75■□□□□ 0.59
INO80-202ENST00000401393 SALL2Q9Y467 1007 aaPredicted RBP18.71■□□□□ 0.59
INO80-202ENST00000401393 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
INO80-202ENST00000401393 KDM2AQ9Y2K7 1162 aa18.7■□□□□ 0.58
INO80-202ENST00000401393 TONSLQ96HA7 1378 aa18.68■□□□□ 0.58
INO80-202ENST00000401393 HSP90AA1P07900 732 aaKnown RBP18.67■□□□□ 0.58
INO80-202ENST00000401393 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
INO80-202ENST00000401393 ARXQ96QS3 562 aa18.6■□□□□ 0.57
INO80-202ENST00000401393 FAM9BQ8IZU0 186 aa18.57■□□□□ 0.56
INO80-202ENST00000401393 WDR43Q15061 677 aaKnown RBP eCLIP18.54■□□□□ 0.56
INO80-202ENST00000401393 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
INO80-202ENST00000401393 ANP32AP39687 249 aaKnown RBP18.51■□□□□ 0.55
INO80-202ENST00000401393 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
INO80-202ENST00000401393 TMC1Q8TDI8 760 aa18.5■□□□□ 0.55
INO80-202ENST00000401393 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
INO80-202ENST00000401393 GTF3C3Q9Y5Q9 886 aa18.48■□□□□ 0.55
INO80-202ENST00000401393 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
INO80-202ENST00000401393 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
INO80-202ENST00000401393 DDX10Q13206 875 aaKnown RBP18.44■□□□□ 0.54
INO80-202ENST00000401393 ANP32BQ92688 251 aaKnown RBP18.43■□□□□ 0.54
INO80-202ENST00000401393 NPHP1O15259 732 aa18.43■□□□□ 0.54
INO80-202ENST00000401393 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.43■□□□□ 0.54
INO80-202ENST00000401393 RGL3Q3MIN7 710 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms