RNA–Protein interactions for RNA: ENST00000331536.7

CROT-201, Transcript of carnitine O-octanoyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CROT, Length 3,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-201ENST00000331536 NISCHQ9Y2I1 1504 aa34.13■■■■□ 3.05
CROT-201ENST00000331536 CCDC180Q9P1Z9 1646 aa29.51■■■□□ 2.31
CROT-201ENST00000331536 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
CROT-201ENST00000331536 ZCCHC6Q5VYS8 1495 aaKnown RBP28.6■■■□□ 2.17
CROT-201ENST00000331536 ABCC9O60706 1549 aa28.53■■■□□ 2.16
CROT-201ENST00000331536 SHROOM4Q9ULL8 1493 aa28.38■■■□□ 2.13
CROT-201ENST00000331536 DCAF1Q9Y4B6 1507 aa27.97■■■□□ 2.07
CROT-201ENST00000331536 NACADO15069 1562 aa27.66■■■□□ 2.02
CROT-201ENST00000331536 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
CROT-201ENST00000331536 SCRIBQ14160 1630 aa27.53■■■□□ 2
CROT-201ENST00000331536 RB1CC1Q8TDY2 1594 aa27.5■■□□□ 1.99
CROT-201ENST00000331536 SUPT5HO00267 1087 aaKnown RBP27.34■■□□□ 1.97
CROT-201ENST00000331536 PABPN1Q86U42 306 aaKnown RBP eCLIP27.09■■□□□ 1.93
CROT-201ENST00000331536 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
CROT-201ENST00000331536 CECR2Q9BXF3 1484 aa26.7■■□□□ 1.86
CROT-201ENST00000331536 BICRAQ9NZM4 1560 aa26.62■■□□□ 1.85
CROT-201ENST00000331536 RSF1Q96T23 1441 aaPredicted RBP26.57■■□□□ 1.84
CROT-201ENST00000331536 MROH2BQ7Z745 1585 aa26.46■■□□□ 1.83
CROT-201ENST00000331536 BAZ1AQ9NRL2 1556 aaPredicted RBP26.34■■□□□ 1.81
CROT-201ENST00000331536 WIZO95785 1651 aa26.21■■□□□ 1.79
CROT-201ENST00000331536 SMARCA4P51532 1647 aa26.21■■□□□ 1.79
CROT-201ENST00000331536 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
CROT-201ENST00000331536 ATAD2BQ9ULI0 1458 aa25.89■■□□□ 1.74
CROT-201ENST00000331536 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
CROT-201ENST00000331536 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.73
CROT-201ENST00000331536 BAZ1BQ9UIG0 1483 aaKnown RBP25.81■■□□□ 1.72
CROT-201ENST00000331536 SMARCA2P51531 1590 aa25.79■■□□□ 1.72
CROT-201ENST00000331536 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
CROT-201ENST00000331536 PEG3Q9GZU2 1588 aa25.71■■□□□ 1.71
CROT-201ENST00000331536 NCAPD3P42695 1498 aa25.61■■□□□ 1.69
CROT-201ENST00000331536 CC2D2AQ9P2K1 1620 aa25.58■■□□□ 1.69
CROT-201ENST00000331536 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
CROT-201ENST00000331536 HMGXB3Q12766 1538 aa25.46■■□□□ 1.67
CROT-201ENST00000331536 FAM9AQ8IZU1 332 aaPredicted RBP25.33■■□□□ 1.65
CROT-201ENST00000331536 DNAJC5BQ9UF47 199 aa25.32■■□□□ 1.64
CROT-201ENST00000331536 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
CROT-201ENST00000331536 EHMT2Q96KQ7 1210 aa25.17■■□□□ 1.62
CROT-201ENST00000331536 LOC105371045A0A1W2PR82 267 aa25.09■■□□□ 1.61
CROT-201ENST00000331536 CADPSQ9ULU8 1353 aa25.09■■□□□ 1.61
CROT-201ENST00000331536 WRNQ14191 1432 aaPredicted RBP eCLIP25.07■■□□□ 1.6
CROT-201ENST00000331536 CFTRP13569 1480 aa25.05■■□□□ 1.6
CROT-201ENST00000331536 NESP48681 1621 aa24.97■■□□□ 1.59
CROT-201ENST00000331536 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
CROT-201ENST00000331536 SOGA1O94964 1423 aa24.81■■□□□ 1.56
CROT-201ENST00000331536 FANCD2Q9BXW9 1451 aa24.81■■□□□ 1.56
CROT-201ENST00000331536 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
CROT-201ENST00000331536 CUX1P39880 1505 aa24.71■■□□□ 1.55
CROT-201ENST00000331536 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
CROT-201ENST00000331536 LAMC3Q9Y6N6 1575 aa24.69■■□□□ 1.54
CROT-201ENST00000331536 CSRNP3Q8WYN3 585 aa24.69■■□□□ 1.54
CROT-201ENST00000331536 TOP2BQ02880 1626 aa24.66■■□□□ 1.54
CROT-201ENST00000331536 CEP164Q9UPV0 1460 aa24.65■■□□□ 1.54
CROT-201ENST00000331536 PRDM2Q13029 1718 aa24.6■■□□□ 1.53
CROT-201ENST00000331536 UBTFP17480 764 aaKnown RBP24.58■■□□□ 1.53
CROT-201ENST00000331536 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
CROT-201ENST00000331536 EEA1Q15075 1411 aa24.53■■□□□ 1.52
CROT-201ENST00000331536 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
CROT-201ENST00000331536 ERCC6Q03468 1493 aa24.48■■□□□ 1.51
CROT-201ENST00000331536 TOPBP1Q92547 1522 aa24.48■■□□□ 1.51
CROT-201ENST00000331536 URB2Q14146 1524 aaKnown RBP24.45■■□□□ 1.5
CROT-201ENST00000331536 CUX2O14529 1486 aa24.44■■□□□ 1.5
CROT-201ENST00000331536 RANGAP1P46060 587 aaPredicted RBP24.44■■□□□ 1.5
CROT-201ENST00000331536 KIF27Q86VH2 1401 aa24.44■■□□□ 1.5
CROT-201ENST00000331536 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
CROT-201ENST00000331536 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
CROT-201ENST00000331536 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
CROT-201ENST00000331536 POLA1P09884 1462 aaPredicted RBP24.39■■□□□ 1.49
CROT-201ENST00000331536 TDRD9Q8NDG6 1382 aaKnown RBP24.31■■□□□ 1.48
CROT-201ENST00000331536 MRC2Q9UBG0 1479 aa24.31■■□□□ 1.48
CROT-201ENST00000331536 GOLGA3Q08378 1498 aa24.3■■□□□ 1.48
CROT-201ENST00000331536 RAPGEF2Q9Y4G8 1499 aa24.26■■□□□ 1.47
CROT-201ENST00000331536 IGF1RP08069 1367 aa24.23■■□□□ 1.47
CROT-201ENST00000331536 TNIKQ9UKE5 1360 aa24.21■■□□□ 1.47
CROT-201ENST00000331536 ABCA10Q8WWZ4 1543 aa24.18■■□□□ 1.46
CROT-201ENST00000331536 CARMIL1Q5VZK9 1371 aa24.17■■□□□ 1.46
CROT-201ENST00000331536 CEP162Q5TB80 1403 aa24.16■■□□□ 1.46
CROT-201ENST00000331536 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
CROT-201ENST00000331536 KIF21BO75037 1637 aa24.12■■□□□ 1.45
CROT-201ENST00000331536 PPARGC1BQ86YN6 1023 aaKnown RBP24.11■■□□□ 1.45
CROT-201ENST00000331536 AQRO60306 1485 aaKnown RBP eCLIP24.09■■□□□ 1.45
CROT-201ENST00000331536 GAPVD1Q14C86 1478 aa24.08■■□□□ 1.45
CROT-201ENST00000331536 WDR62O43379 1518 aa24.06■■□□□ 1.44
CROT-201ENST00000331536 TTBK1Q5TCY1 1321 aaPredicted RBP24.03■■□□□ 1.44
CROT-201ENST00000331536 CLIP1P30622 1438 aa24.01■■□□□ 1.43
CROT-201ENST00000331536 ZNF608Q9ULD9 1512 aaPredicted RBP24■■□□□ 1.43
CROT-201ENST00000331536 IFT140Q96RY7 1462 aa23.99■■□□□ 1.43
CROT-201ENST00000331536 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
CROT-201ENST00000331536 TARBP1Q13395 1621 aaKnown RBP23.97■■□□□ 1.43
CROT-201ENST00000331536 THOC2Q8NI27 1593 aaKnown RBP23.97■■□□□ 1.43
CROT-201ENST00000331536 FBLN2P98095 1184 aa23.95■■□□□ 1.42
CROT-201ENST00000331536 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
CROT-201ENST00000331536 P3H3Q8IVL6 736 aa23.91■■□□□ 1.42
CROT-201ENST00000331536 WDR97A6NE52 1622 aa23.9■■□□□ 1.42
CROT-201ENST00000331536 ABCA5Q8WWZ7 1642 aa23.89■■□□□ 1.41
CROT-201ENST00000331536 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
CROT-201ENST00000331536 APLP2Q06481 763 aa23.83■■□□□ 1.4
CROT-201ENST00000331536 CHMP7Q8WUX9 453 aaPredicted RBP23.82■■□□□ 1.4
CROT-201ENST00000331536 CUL7Q14999 1698 aa23.79■■□□□ 1.4
CROT-201ENST00000331536 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
CROT-201ENST00000331536 FHAD1B1AJZ9 1412 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms