RNA–Protein interactions for RNA: ENST00000534961.5

RNF170-209, Transcript of ring finger protein 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF170, Length 4,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-209ENST00000534961 NISCHQ9Y2I1 1504 aa27.42■■□□□ 1.98
RNF170-209ENST00000534961 DCAF8L2P0C7V8 631 aa26.58■■□□□ 1.85
RNF170-209ENST00000534961 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
RNF170-209ENST00000534961 SUPT5HO00267 1087 aaKnown RBP25.03■■□□□ 1.6
RNF170-209ENST00000534961 EHMT2Q96KQ7 1210 aa23.8■■□□□ 1.4
RNF170-209ENST00000534961 ABCC9O60706 1549 aa23.58■■□□□ 1.37
RNF170-209ENST00000534961 FAM9AQ8IZU1 332 aaPredicted RBP23.48■■□□□ 1.35
RNF170-209ENST00000534961 TRIM41Q8WV44 630 aa23.21■■□□□ 1.31
RNF170-209ENST00000534961 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
RNF170-209ENST00000534961 RANGAP1P46060 587 aaPredicted RBP22.92■■□□□ 1.26
RNF170-209ENST00000534961 APLP2Q06481 763 aa22.9■■□□□ 1.26
RNF170-209ENST00000534961 TTBK1Q5TCY1 1321 aaPredicted RBP22.84■■□□□ 1.25
RNF170-209ENST00000534961 CCDC180Q9P1Z9 1646 aa22.78■■□□□ 1.24
RNF170-209ENST00000534961 ZCCHC6Q5VYS8 1495 aaKnown RBP22.74■■□□□ 1.23
RNF170-209ENST00000534961 UBTFP17480 764 aaKnown RBP22.74■■□□□ 1.23
RNF170-209ENST00000534961 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
RNF170-209ENST00000534961 PCGF6Q9BYE7 350 aa22.61■■□□□ 1.21
RNF170-209ENST00000534961 ATP1B4Q9UN42 357 aaPredicted RBP22.53■■□□□ 1.2
RNF170-209ENST00000534961 SCRIBQ14160 1630 aa22.47■■□□□ 1.19
RNF170-209ENST00000534961 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
RNF170-209ENST00000534961 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
RNF170-209ENST00000534961 RB1CC1Q8TDY2 1594 aa22.1■■□□□ 1.13
RNF170-209ENST00000534961 CCER1Q8TC90 406 aaPredicted RBP22.04■■□□□ 1.12
RNF170-209ENST00000534961 NACADO15069 1562 aa22■■□□□ 1.11
RNF170-209ENST00000534961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.91■■□□□ 1.1
RNF170-209ENST00000534961 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
RNF170-209ENST00000534961 TRIM26Q12899 539 aaPredicted RBP21.88■■□□□ 1.09
RNF170-209ENST00000534961 ITGAEP38570 1179 aa21.82■■□□□ 1.08
RNF170-209ENST00000534961 DCAF1Q9Y4B6 1507 aa21.82■■□□□ 1.08
RNF170-209ENST00000534961 RSF1Q96T23 1441 aaPredicted RBP21.78■■□□□ 1.08
RNF170-209ENST00000534961 ZEB1P37275 1124 aaPredicted RBP21.76■■□□□ 1.07
RNF170-209ENST00000534961 CSRNP3Q8WYN3 585 aa21.71■■□□□ 1.07
RNF170-209ENST00000534961 FBLN2P98095 1184 aa21.68■■□□□ 1.06
RNF170-209ENST00000534961 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
RNF170-209ENST00000534961 MYT1LQ9UL68 1186 aa21.51■■□□□ 1.03
RNF170-209ENST00000534961 P3H3Q8IVL6 736 aa21.5■■□□□ 1.03
RNF170-209ENST00000534961 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
RNF170-209ENST00000534961 BAZ1AQ9NRL2 1556 aaPredicted RBP21.41■■□□□ 1.02
RNF170-209ENST00000534961 FAM50AQ14320 339 aaKnown RBP21.4■■□□□ 1.02
RNF170-209ENST00000534961 HRCP23327 699 aa21.36■■□□□ 1.01
RNF170-209ENST00000534961 ARID3CA6NKF2 412 aa21.34■■□□□ 1.01
RNF170-209ENST00000534961 MYO15BQ96JP2 1530 aa21.32■■□□□ 1
RNF170-209ENST00000534961 MROH2BQ7Z745 1585 aa21.3■■□□□ 1
RNF170-209ENST00000534961 WRNQ14191 1432 aaPredicted RBP eCLIP21.18■□□□□ 0.98
RNF170-209ENST00000534961 TRIM52Q96A61 297 aa21.1■□□□□ 0.97
RNF170-209ENST00000534961 CENPBP07199 599 aaPredicted RBP21.05■□□□□ 0.96
RNF170-209ENST00000534961 YTHDC1Q96MU7 727 aaKnown RBP21.05■□□□□ 0.96
RNF170-209ENST00000534961 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
RNF170-209ENST00000534961 CHMP7Q8WUX9 453 aaPredicted RBP21.02■□□□□ 0.96
RNF170-209ENST00000534961 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
RNF170-209ENST00000534961 NEUROD1Q13562 356 aa20.98■□□□□ 0.95
RNF170-209ENST00000534961 ZNF777Q9ULD5 760 aaPredicted RBP20.97■□□□□ 0.95
RNF170-209ENST00000534961 CDK11AQ9UQ88 783 aaPredicted RBP20.96■□□□□ 0.95
RNF170-209ENST00000534961 WIZO95785 1651 aa20.95■□□□□ 0.94
RNF170-209ENST00000534961 PELP1Q8IZL8 1130 aaKnown RBP20.95■□□□□ 0.94
RNF170-209ENST00000534961 SMARCA2P51531 1590 aa20.94■□□□□ 0.94
RNF170-209ENST00000534961 EEA1Q15075 1411 aa20.94■□□□□ 0.94
RNF170-209ENST00000534961 CLIP1P30622 1438 aa20.92■□□□□ 0.94
RNF170-209ENST00000534961 KIF27Q86VH2 1401 aa20.9■□□□□ 0.94
RNF170-209ENST00000534961 CNGB1Q14028 1251 aaPredicted RBP20.9■□□□□ 0.94
RNF170-209ENST00000534961 ERCC6Q03468 1493 aa20.87■□□□□ 0.93
RNF170-209ENST00000534961 ATAD2BQ9ULI0 1458 aa20.86■□□□□ 0.93
RNF170-209ENST00000534961 GOLGA3Q08378 1498 aa20.84■□□□□ 0.93
RNF170-209ENST00000534961 SOGA1O94964 1423 aa20.83■□□□□ 0.92
RNF170-209ENST00000534961 CEP162Q5TB80 1403 aa20.81■□□□□ 0.92
RNF170-209ENST00000534961 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
RNF170-209ENST00000534961 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
RNF170-209ENST00000534961 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
RNF170-209ENST00000534961 ZNF326Q5BKZ1 582 aaKnown RBP20.75■□□□□ 0.91
RNF170-209ENST00000534961 NPM1P06748 294 aaKnown RBP eCLIP20.74■□□□□ 0.91
RNF170-209ENST00000534961 CUX2O14529 1486 aa20.73■□□□□ 0.91
RNF170-209ENST00000534961 CEP164Q9UPV0 1460 aa20.73■□□□□ 0.91
RNF170-209ENST00000534961 MTUS2Q5JR59 1369 aa20.72■□□□□ 0.91
RNF170-209ENST00000534961 TNIKQ9UKE5 1360 aa20.72■□□□□ 0.91
RNF170-209ENST00000534961 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
RNF170-209ENST00000534961 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
RNF170-209ENST00000534961 CHIC2Q9UKJ5 165 aa20.69■□□□□ 0.9
RNF170-209ENST00000534961 PDS5BQ9NTI5 1447 aa20.67■□□□□ 0.9
RNF170-209ENST00000534961 CARMIL1Q5VZK9 1371 aa20.66■□□□□ 0.9
RNF170-209ENST00000534961 TDRD9Q8NDG6 1382 aaKnown RBP20.62■□□□□ 0.89
RNF170-209ENST00000534961 SLC4A1APQ9BWU0 796 aaKnown RBP20.61■□□□□ 0.89
RNF170-209ENST00000534961 NEFLP07196 543 aa20.6■□□□□ 0.89
RNF170-209ENST00000534961 KCNH8Q96L42 1107 aa20.56■□□□□ 0.88
RNF170-209ENST00000534961 PLEKHD1A6NEE1 506 aa20.52■□□□□ 0.88
RNF170-209ENST00000534961 TSPY4P0CV99 314 aa20.51■□□□□ 0.87
RNF170-209ENST00000534961 TSPY10P0CW01 314 aa20.51■□□□□ 0.87
RNF170-209ENST00000534961 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
RNF170-209ENST00000534961 EIF4G1Q04637 1599 aaKnown RBP20.46■□□□□ 0.87
RNF170-209ENST00000534961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.45■□□□□ 0.86
RNF170-209ENST00000534961 RRP7BPQ9NSQ0 103 aa20.44■□□□□ 0.86
RNF170-209ENST00000534961 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
RNF170-209ENST00000534961 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
RNF170-209ENST00000534961 TONSLQ96HA7 1378 aa20.38■□□□□ 0.85
RNF170-209ENST00000534961 CHGAP10645 457 aaKnown RBP20.36■□□□□ 0.85
RNF170-209ENST00000534961 CFDP1Q9UEE9 299 aaPredicted RBP20.36■□□□□ 0.85
RNF170-209ENST00000534961 RUSC2Q8N2Y8 1516 aa20.36■□□□□ 0.85
RNF170-209ENST00000534961 ESF1Q9H501 851 aaKnown RBP20.34■□□□□ 0.85
RNF170-209ENST00000534961 BCANQ96GW7 911 aa20.33■□□□□ 0.84
RNF170-209ENST00000534961 FHAD1B1AJZ9 1412 aa20.31■□□□□ 0.84
RNF170-209ENST00000534961 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 539.9 ms