RNA–Protein interactions for RNA: ENST00000310624.6

NEFH-201, Transcript of neurofilament heavy, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEFH, Length 3,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFH-201ENST00000310624 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
NEFH-201ENST00000310624 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
NEFH-201ENST00000310624 SHROOM4Q9ULL8 1493 aa24.34■■□□□ 1.49
NEFH-201ENST00000310624 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
NEFH-201ENST00000310624 EHMT2Q96KQ7 1210 aa23.47■■□□□ 1.35
NEFH-201ENST00000310624 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
NEFH-201ENST00000310624 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
NEFH-201ENST00000310624 PELP1Q8IZL8 1130 aaKnown RBP22.7■■□□□ 1.22
NEFH-201ENST00000310624 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
NEFH-201ENST00000310624 PPARGC1BQ86YN6 1023 aaKnown RBP22.68■■□□□ 1.22
NEFH-201ENST00000310624 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
NEFH-201ENST00000310624 HRCP23327 699 aa22.53■■□□□ 1.2
NEFH-201ENST00000310624 LOC105371045A0A1W2PR82 267 aa22.5■■□□□ 1.19
NEFH-201ENST00000310624 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
NEFH-201ENST00000310624 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
NEFH-201ENST00000310624 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
NEFH-201ENST00000310624 MYT1Q01538 1121 aa21.97■■□□□ 1.11
NEFH-201ENST00000310624 RANGAP1P46060 587 aaPredicted RBP21.95■■□□□ 1.1
NEFH-201ENST00000310624 CCER1Q8TC90 406 aaPredicted RBP21.91■■□□□ 1.1
NEFH-201ENST00000310624 YTHDC1Q96MU7 727 aaKnown RBP21.86■■□□□ 1.09
NEFH-201ENST00000310624 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
NEFH-201ENST00000310624 TRIM26Q12899 539 aaPredicted RBP21.83■■□□□ 1.09
NEFH-201ENST00000310624 ABCC9O60706 1549 aa21.8■■□□□ 1.08
NEFH-201ENST00000310624 SCAF1Q9H7N4 1312 aaKnown RBP21.73■■□□□ 1.07
NEFH-201ENST00000310624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.6■■□□□ 1.05
NEFH-201ENST00000310624 ZEB1P37275 1124 aaPredicted RBP21.59■■□□□ 1.05
NEFH-201ENST00000310624 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
NEFH-201ENST00000310624 UBTFP17480 764 aaKnown RBP21.51■■□□□ 1.03
NEFH-201ENST00000310624 CENPBP07199 599 aaPredicted RBP21.49■■□□□ 1.03
NEFH-201ENST00000310624 APLP2Q06481 763 aa21.43■■□□□ 1.02
NEFH-201ENST00000310624 PABPN1Q86U42 306 aaKnown RBP eCLIP21.42■■□□□ 1.02
NEFH-201ENST00000310624 GTF3C3Q9Y5Q9 886 aa21.41■■□□□ 1.02
NEFH-201ENST00000310624 RSF1Q96T23 1441 aaPredicted RBP21.36■■□□□ 1.01
NEFH-201ENST00000310624 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
NEFH-201ENST00000310624 HNRNPUL2Q1KMD3 747 aaKnown RBP21.27■■□□□ 1
NEFH-201ENST00000310624 DIEXFQ68CQ4 756 aaKnown RBP21.16■□□□□ 0.98
NEFH-201ENST00000310624 NEUROD1Q13562 356 aa21.16■□□□□ 0.98
NEFH-201ENST00000310624 ACIN1Q9UKV3 1341 aaKnown RBP21.13■□□□□ 0.97
NEFH-201ENST00000310624 CECR2Q9BXF3 1484 aa21.12■□□□□ 0.97
NEFH-201ENST00000310624 ITGAEP38570 1179 aa21.1■□□□□ 0.97
NEFH-201ENST00000310624 ATP1B4Q9UN42 357 aaPredicted RBP21.09■□□□□ 0.97
NEFH-201ENST00000310624 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
NEFH-201ENST00000310624 CSRNP3Q8WYN3 585 aa20.89■□□□□ 0.93
NEFH-201ENST00000310624 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
NEFH-201ENST00000310624 CNGB1Q14028 1251 aaPredicted RBP20.76■□□□□ 0.91
NEFH-201ENST00000310624 BCANQ96GW7 911 aa20.74■□□□□ 0.91
NEFH-201ENST00000310624 BCL11AQ9H165 835 aa20.74■□□□□ 0.91
NEFH-201ENST00000310624 NACADO15069 1562 aa20.72■□□□□ 0.91
NEFH-201ENST00000310624 WIZO95785 1651 aa20.62■□□□□ 0.89
NEFH-201ENST00000310624 ERICH6Q7L0X2 663 aa20.58■□□□□ 0.88
NEFH-201ENST00000310624 SOGA1O94964 1423 aa20.57■□□□□ 0.88
NEFH-201ENST00000310624 NEFLP07196 543 aa20.55■□□□□ 0.88
NEFH-201ENST00000310624 ZNF316A6NFI3 1004 aaPredicted RBP20.55■□□□□ 0.88
NEFH-201ENST00000310624 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
NEFH-201ENST00000310624 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.88
NEFH-201ENST00000310624 CEP162Q5TB80 1403 aa20.51■□□□□ 0.87
NEFH-201ENST00000310624 BAZ1AQ9NRL2 1556 aaPredicted RBP20.47■□□□□ 0.87
NEFH-201ENST00000310624 MIER1Q8N108 512 aa20.41■□□□□ 0.86
NEFH-201ENST00000310624 POLR3GLQ9BT43 218 aa20.4■□□□□ 0.86
NEFH-201ENST00000310624 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
NEFH-201ENST00000310624 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
NEFH-201ENST00000310624 RUSC2Q8N2Y8 1516 aa20.33■□□□□ 0.85
NEFH-201ENST00000310624 TNIKQ9UKE5 1360 aa20.32■□□□□ 0.84
NEFH-201ENST00000310624 CLIP1P30622 1438 aa20.29■□□□□ 0.84
NEFH-201ENST00000310624 FAM50AQ14320 339 aaKnown RBP20.28■□□□□ 0.84
NEFH-201ENST00000310624 ANP32EQ9BTT0 268 aa20.26■□□□□ 0.83
NEFH-201ENST00000310624 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
NEFH-201ENST00000310624 HIRIP3Q9BW71 556 aaPredicted RBP20.21■□□□□ 0.83
NEFH-201ENST00000310624 EEA1Q15075 1411 aa20.15■□□□□ 0.82
NEFH-201ENST00000310624 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
NEFH-201ENST00000310624 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.82
NEFH-201ENST00000310624 PRKCSHP14314 528 aaPredicted RBP20.1■□□□□ 0.81
NEFH-201ENST00000310624 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
NEFH-201ENST00000310624 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.8
NEFH-201ENST00000310624 FKBP8Q14318 412 aa20.07■□□□□ 0.8
NEFH-201ENST00000310624 TRIM52Q96A61 297 aa20.07■□□□□ 0.8
NEFH-201ENST00000310624 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
NEFH-201ENST00000310624 KANK4Q5T7N3 995 aaPredicted RBP20.04■□□□□ 0.8
NEFH-201ENST00000310624 ARID3CA6NKF2 412 aa20.02■□□□□ 0.8
NEFH-201ENST00000310624 SMARCA2P51531 1590 aa20.02■□□□□ 0.79
NEFH-201ENST00000310624 IRX6P78412 446 aaPredicted RBP19.97■□□□□ 0.79
NEFH-201ENST00000310624 SENP3-EIF4A1A0A087X0R7 540 aa19.96■□□□□ 0.79
NEFH-201ENST00000310624 RAPGEF2Q9Y4G8 1499 aa19.94■□□□□ 0.78
NEFH-201ENST00000310624 ATAD2BQ9ULI0 1458 aa19.91■□□□□ 0.78
NEFH-201ENST00000310624 ANP32CO43423 234 aa19.89■□□□□ 0.77
NEFH-201ENST00000310624 VPS8Q8N3P4 1428 aa19.88■□□□□ 0.77
NEFH-201ENST00000310624 ZNF326Q5BKZ1 582 aaKnown RBP19.88■□□□□ 0.77
NEFH-201ENST00000310624 TSHZ2Q9NRE2 1034 aa19.82■□□□□ 0.76
NEFH-201ENST00000310624 SUPT16HQ9Y5B9 1047 aaKnown RBP19.82■□□□□ 0.76
NEFH-201ENST00000310624 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
NEFH-201ENST00000310624 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
NEFH-201ENST00000310624 HNRNPUQ00839 825 aaKnown RBP eCLIP19.75■□□□□ 0.75
NEFH-201ENST00000310624 CHIC2Q9UKJ5 165 aa19.73■□□□□ 0.75
NEFH-201ENST00000310624 CDK11AQ9UQ88 783 aaPredicted RBP19.71■□□□□ 0.75
NEFH-201ENST00000310624 FAM9BQ8IZU0 186 aa19.69■□□□□ 0.74
NEFH-201ENST00000310624 CUX2O14529 1486 aa19.69■□□□□ 0.74
NEFH-201ENST00000310624 SYNJ1O43426 1573 aa19.69■□□□□ 0.74
NEFH-201ENST00000310624 EIF5BO60841 1220 aaKnown RBP19.68■□□□□ 0.74
NEFH-201ENST00000310624 NBR1Q14596 966 aa19.67■□□□□ 0.74
NEFH-201ENST00000310624 RTN4Q9NQC3 1192 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms