Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SNCGO76070 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC10.08□□□□□ -0.8
SNCGO76070 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SNCGO76070 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC10.08□□□□□ -0.8
SNCGO76070 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SNCGO76070 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.08□□□□□ -0.8
SNCGO76070 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
SNCGO76070 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC10.08□□□□□ -0.8
SNCGO76070 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC10.08□□□□□ -0.8
SNCGO76070 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC10.08□□□□□ -0.8
SNCGO76070 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC10.08□□□□□ -0.8
SNCGO76070 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC10.08□□□□□ -0.8
SNCGO76070 LINC01568-207ENST00000641790 1380 ntBASIC10.08□□□□□ -0.8
SNCGO76070 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SNCGO76070 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SNCGO76070 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SNCGO76070 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC10.08□□□□□ -0.8
SNCGO76070 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC10.08□□□□□ -0.8
SNCGO76070 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SNCGO76070 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SNCGO76070 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SNCGO76070 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
SNCGO76070 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SNCGO76070 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
SNCGO76070 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
SNCGO76070 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SNCGO76070 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC10.08□□□□□ -0.8
SNCGO76070 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SNCGO76070 MME-217ENST00000616757 1315 ntTSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SNCGO76070 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.07□□□□□ -0.8
SNCGO76070 AC007614.4-201ENST00000564048 1827 ntBASIC10.07□□□□□ -0.8
SNCGO76070 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC10.07□□□□□ -0.8
SNCGO76070 ACAN-208ENST00000561243 7593 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 SH3BGRL2-201ENST00000369838 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
SNCGO76070 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC10.07□□□□□ -0.8
SNCGO76070 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 CYP2D8P-201ENST00000433633 1490 ntBASIC10.07□□□□□ -0.8
SNCGO76070 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 CD99-202ENST00000381180 530 ntTSL 2 BASIC10.07□□□□□ -0.8
SNCGO76070 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC10.07□□□□□ -0.8
SNCGO76070 HLA-L-209ENST00000420110 1011 ntBASIC10.07□□□□□ -0.8
SNCGO76070 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SNCGO76070 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC10.07□□□□□ -0.8
SNCGO76070 PAWRP1-201ENST00000451083 565 ntBASIC10.07□□□□□ -0.8
SNCGO76070 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC10.07□□□□□ -0.8
SNCGO76070 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC10.07□□□□□ -0.8
SNCGO76070 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 AC091076.1-201ENST00000610741 619 ntBASIC10.07□□□□□ -0.8
SNCGO76070 AL138966.2-201ENST00000621997 464 ntBASIC10.07□□□□□ -0.8
SNCGO76070 TCAF2-204ENST00000441159 5568 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC10.07□□□□□ -0.8
SNCGO76070 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC10.07□□□□□ -0.8
SNCGO76070 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 PI4KAP1-204ENST00000612579 1703 ntBASIC10.07□□□□□ -0.8
SNCGO76070 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC10.07□□□□□ -0.8
SNCGO76070 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 GOLGA2P5-201ENST00000266746 2395 ntBASIC10.07□□□□□ -0.8
SNCGO76070 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNCGO76070 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms