RNA–Protein interactions for RNA: ENST00000585598.1

PSMD8-202, Transcript of proteasome 26S subunit, non-ATPase 8, humanhuman

TSL 5 BASIC

Gene PSMD8, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8-202ENST00000585598 NISCHQ9Y2I1 1504 aa45.98■■■■■ 4.95
PSMD8-202ENST00000585598 CCDC180Q9P1Z9 1646 aa41.29■■■■■ 4.2
PSMD8-202ENST00000585598 ABCC9O60706 1549 aa40.93■■■■■ 4.14
PSMD8-202ENST00000585598 RB1CC1Q8TDY2 1594 aa39.21■■■■□ 3.87
PSMD8-202ENST00000585598 NACADO15069 1562 aa38.98■■■■□ 3.83
PSMD8-202ENST00000585598 DCAF8L2P0C7V8 631 aa38.82■■■■□ 3.8
PSMD8-202ENST00000585598 MYO15BQ96JP2 1530 aa38.49■■■■□ 3.75
PSMD8-202ENST00000585598 UNC13AQ9UPW8 1703 aa38.21■■■■□ 3.71
PSMD8-202ENST00000585598 ZCCHC6Q5VYS8 1495 aaKnown RBP38.14■■■■□ 3.7
PSMD8-202ENST00000585598 PABPN1Q86U42 306 aaKnown RBP eCLIP38.1■■■■□ 3.69
PSMD8-202ENST00000585598 DCAF1Q9Y4B6 1507 aa38.06■■■■□ 3.68
PSMD8-202ENST00000585598 DNAJC5BQ9UF47 199 aa37.99■■■■□ 3.67
PSMD8-202ENST00000585598 BICRAQ9NZM4 1560 aa37.84■■■■□ 3.65
PSMD8-202ENST00000585598 SHROOM4Q9ULL8 1493 aa37.61■■■■□ 3.61
PSMD8-202ENST00000585598 SCRIBQ14160 1630 aa37.54■■■■□ 3.6
PSMD8-202ENST00000585598 CC2D2AQ9P2K1 1620 aa37.02■■■■□ 3.52
PSMD8-202ENST00000585598 EIF4G1Q04637 1599 aaKnown RBP37■■■■□ 3.51
PSMD8-202ENST00000585598 CECR2Q9BXF3 1484 aa36.9■■■■□ 3.5
PSMD8-202ENST00000585598 NCAPD3P42695 1498 aa35.89■■■■□ 3.34
PSMD8-202ENST00000585598 SMARCA4P51532 1647 aa35.85■■■■□ 3.33
PSMD8-202ENST00000585598 SMARCA2P51531 1590 aa35.84■■■■□ 3.33
PSMD8-202ENST00000585598 ATAD2BQ9ULI0 1458 aa35.79■■■■□ 3.32
PSMD8-202ENST00000585598 BAZ1AQ9NRL2 1556 aaPredicted RBP35.77■■■■□ 3.32
PSMD8-202ENST00000585598 HMGXB3Q12766 1538 aa35.7■■■■□ 3.31
PSMD8-202ENST00000585598 BAZ1BQ9UIG0 1483 aaKnown RBP35.54■■■■□ 3.28
PSMD8-202ENST00000585598 PEG3Q9GZU2 1588 aa35.49■■■■□ 3.27
PSMD8-202ENST00000585598 ERCC6Q03468 1493 aa35.48■■■■□ 3.27
PSMD8-202ENST00000585598 MROH2BQ7Z745 1585 aa35.35■■■■□ 3.25
PSMD8-202ENST00000585598 CUX2O14529 1486 aa35.31■■■■□ 3.24
PSMD8-202ENST00000585598 NESP48681 1621 aa35.15■■■■□ 3.22
PSMD8-202ENST00000585598 LAMC3Q9Y6N6 1575 aa35.14■■■■□ 3.22
PSMD8-202ENST00000585598 WIZO95785 1651 aa34.99■■■■□ 3.19
PSMD8-202ENST00000585598 PDS5BQ9NTI5 1447 aa34.97■■■■□ 3.19
PSMD8-202ENST00000585598 DNAJC5Q9H3Z4 198 aa34.94■■■■□ 3.18
PSMD8-202ENST00000585598 CADPSQ9ULU8 1353 aa34.84■■■■□ 3.17
PSMD8-202ENST00000585598 THOC2Q8NI27 1593 aaKnown RBP34.83■■■■□ 3.17
PSMD8-202ENST00000585598 KIF21AQ7Z4S6 1674 aa34.82■■■■□ 3.16
PSMD8-202ENST00000585598 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
PSMD8-202ENST00000585598 TOP2AP11388 1531 aaKnown RBP34.63■■■■□ 3.13
PSMD8-202ENST00000585598 MRC2Q9UBG0 1479 aa34.57■■■■□ 3.12
PSMD8-202ENST00000585598 CEP164Q9UPV0 1460 aa34.52■■■■□ 3.12
PSMD8-202ENST00000585598 CFTRP13569 1480 aa34.46■■■■□ 3.11
PSMD8-202ENST00000585598 WDR62O43379 1518 aa34.45■■■■□ 3.1
PSMD8-202ENST00000585598 FANCD2Q9BXW9 1451 aa34.44■■■■□ 3.1
PSMD8-202ENST00000585598 PRDM2Q13029 1718 aa34.28■■■■□ 3.08
PSMD8-202ENST00000585598 CCDC88BA6NC98 1476 aa34.17■■■■□ 3.06
PSMD8-202ENST00000585598 URB2Q14146 1524 aaKnown RBP34.05■■■■□ 3.04
PSMD8-202ENST00000585598 ABCC8Q09428 1581 aa33.91■■■■□ 3.02
PSMD8-202ENST00000585598 IFT140Q96RY7 1462 aa33.82■■■■□ 3
PSMD8-202ENST00000585598 TOPBP1Q92547 1522 aa33.79■■■■□ 3
PSMD8-202ENST00000585598 OSCARQ8IYS5 282 aa33.75■■■□□ 2.99
PSMD8-202ENST00000585598 DNMBPQ6XZF7 1577 aa33.74■■■□□ 2.99
PSMD8-202ENST00000585598 ZNF608Q9ULD9 1512 aaPredicted RBP33.58■■■□□ 2.97
PSMD8-202ENST00000585598 TRIM41Q8WV44 630 aa33.55■■■□□ 2.96
PSMD8-202ENST00000585598 EIF4G3O43432 1585 aaKnown RBP33.51■■■□□ 2.95
PSMD8-202ENST00000585598 POLA1P09884 1462 aaPredicted RBP33.44■■■□□ 2.94
PSMD8-202ENST00000585598 TARBP1Q13395 1621 aaKnown RBP33.44■■■□□ 2.94
PSMD8-202ENST00000585598 SUPT5HO00267 1087 aaKnown RBP33.44■■■□□ 2.94
PSMD8-202ENST00000585598 SOGA1O94964 1423 aa33.36■■■□□ 2.93
PSMD8-202ENST00000585598 AQRO60306 1485 aaKnown RBP eCLIP33.34■■■□□ 2.939e-9■■■■■ 35.9
PSMD8-202ENST00000585598 WDR97A6NE52 1622 aa33.31■■■□□ 2.92
PSMD8-202ENST00000585598 FGD5Q6ZNL6 1462 aa33.28■■■□□ 2.92
PSMD8-202ENST00000585598 RAD54L2Q9Y4B4 1467 aa33.26■■■□□ 2.92
PSMD8-202ENST00000585598 CHD1O14646 1710 aa33.24■■■□□ 2.91
PSMD8-202ENST00000585598 CUX1P39880 1505 aa33.23■■■□□ 2.91
PSMD8-202ENST00000585598 FBLN2P98095 1184 aa33.22■■■□□ 2.91
PSMD8-202ENST00000585598 RIMBP3CA6NJZ7 1639 aa33.2■■■□□ 2.9
PSMD8-202ENST00000585598 RIMBP3BA6NNM3 1639 aa33.2■■■□□ 2.9
PSMD8-202ENST00000585598 RIMBP3Q9UFD9 1639 aa33.2■■■□□ 2.9
PSMD8-202ENST00000585598 TDRD9Q8NDG6 1382 aaKnown RBP33.19■■■□□ 2.9
PSMD8-202ENST00000585598 ARHGEF11O15085 1522 aa33.11■■■□□ 2.89
PSMD8-202ENST00000585598 GRIN2BQ13224 1484 aa33.06■■■□□ 2.88
PSMD8-202ENST00000585598 MAGI1Q96QZ7 1491 aaPredicted RBP33.06■■■□□ 2.88
PSMD8-202ENST00000585598 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
PSMD8-202ENST00000585598 CHMP7Q8WUX9 453 aaPredicted RBP33.04■■■□□ 2.88
PSMD8-202ENST00000585598 SYNJ1O43426 1573 aa32.96■■■□□ 2.87
PSMD8-202ENST00000585598 GAPVD1Q14C86 1478 aa32.96■■■□□ 2.87
PSMD8-202ENST00000585598 PBRM1Q86U86 1689 aa32.96■■■□□ 2.87
PSMD8-202ENST00000585598 ABCA10Q8WWZ4 1543 aa32.94■■■□□ 2.86
PSMD8-202ENST00000585598 WRNQ14191 1432 aaPredicted RBP eCLIP32.92■■■□□ 2.86
PSMD8-202ENST00000585598 SYNJ2O15056 1496 aa32.92■■■□□ 2.86
PSMD8-202ENST00000585598 CYB5RLQ6IPT4 315 aa32.88■■■□□ 2.85
PSMD8-202ENST00000585598 TOP2BQ02880 1626 aa32.85■■■□□ 2.85
PSMD8-202ENST00000585598 BIVM-ERCC5R4GMW8 1640 aa32.85■■■□□ 2.85
PSMD8-202ENST00000585598 ABCA5Q8WWZ7 1642 aa32.84■■■□□ 2.85
PSMD8-202ENST00000585598 CLASP1Q7Z460 1538 aa32.8■■■□□ 2.84
PSMD8-202ENST00000585598 ARAP1Q96P48 1450 aa32.74■■■□□ 2.83
PSMD8-202ENST00000585598 ADAMTS12P58397 1594 aa32.6■■■□□ 2.81
PSMD8-202ENST00000585598 GRIN2AQ12879 1464 aa32.6■■■□□ 2.81
PSMD8-202ENST00000585598 ERICH3Q5RHP9 1530 aa32.59■■■□□ 2.81
PSMD8-202ENST00000585598 FHAD1B1AJZ9 1412 aa32.57■■■□□ 2.8
PSMD8-202ENST00000585598 TRHP20396 242 aaPredicted RBP32.55■■■□□ 2.8
PSMD8-202ENST00000585598 NUP160Q12769 1436 aa32.44■■■□□ 2.78
PSMD8-202ENST00000585598 CEP170Q5SW79 1584 aa32.41■■■□□ 2.78
PSMD8-202ENST00000585598 SHROOM2Q13796 1616 aa32.29■■■□□ 2.76
PSMD8-202ENST00000585598 KIF27Q86VH2 1401 aa32.28■■■□□ 2.76
PSMD8-202ENST00000585598 CUL7Q14999 1698 aa32.21■■■□□ 2.75
PSMD8-202ENST00000585598 ERCC6L2Q5T890 1561 aa32.19■■■□□ 2.74
PSMD8-202ENST00000585598 JPH4Q96JJ6 628 aa32.17■■■□□ 2.74
PSMD8-202ENST00000585598 PRG4Q92954 1404 aaPredicted RBP32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms