RNA–Protein interactions for RNA: ENST00000353334.10

CD74-202, Transcript of CD74 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD74, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-202ENST00000353334 NISCHQ9Y2I1 1504 aa32.81■■■□□ 2.84
CD74-202ENST00000353334 ABCC9O60706 1549 aa30.15■■■□□ 2.42
CD74-202ENST00000353334 CCDC180Q9P1Z9 1646 aa29.66■■■□□ 2.34
CD74-202ENST00000353334 DNAJC5BQ9UF47 199 aa28.7■■■□□ 2.19
CD74-202ENST00000353334 RB1CC1Q8TDY2 1594 aa28.44■■■□□ 2.14
CD74-202ENST00000353334 NACADO15069 1562 aa28.11■■■□□ 2.09
CD74-202ENST00000353334 PABPN1Q86U42 306 aaKnown RBP eCLIP27.99■■■□□ 2.07
CD74-202ENST00000353334 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
CD74-202ENST00000353334 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
CD74-202ENST00000353334 BICRAQ9NZM4 1560 aa27.7■■■□□ 2.02
CD74-202ENST00000353334 MYO15BQ96JP2 1530 aa27.54■■■□□ 2
CD74-202ENST00000353334 CC2D2AQ9P2K1 1620 aa27.21■■□□□ 1.95
CD74-202ENST00000353334 CECR2Q9BXF3 1484 aa27.19■■□□□ 1.94
CD74-202ENST00000353334 SHROOM4Q9ULL8 1493 aa27.16■■□□□ 1.94
CD74-202ENST00000353334 ZCCHC6Q5VYS8 1495 aaKnown RBP27.1■■□□□ 1.93
CD74-202ENST00000353334 SCRIBQ14160 1630 aa27.06■■□□□ 1.92
CD74-202ENST00000353334 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
CD74-202ENST00000353334 EIF4G1Q04637 1599 aaKnown RBP27.02■■□□□ 1.92
CD74-202ENST00000353334 DNAJC5Q9H3Z4 198 aa26.63■■□□□ 1.85
CD74-202ENST00000353334 CUX2O14529 1486 aa26.12■■□□□ 1.77
CD74-202ENST00000353334 ERCC6Q03468 1493 aa26.03■■□□□ 1.76
CD74-202ENST00000353334 NCAPD3P42695 1498 aa25.96■■□□□ 1.75
CD74-202ENST00000353334 ATAD2BQ9ULI0 1458 aa25.84■■□□□ 1.73
CD74-202ENST00000353334 NESP48681 1621 aa25.79■■□□□ 1.72
CD74-202ENST00000353334 HMGXB3Q12766 1538 aa25.75■■□□□ 1.71
CD74-202ENST00000353334 SMARCA4P51532 1647 aa25.73■■□□□ 1.71
CD74-202ENST00000353334 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
CD74-202ENST00000353334 THOC2Q8NI27 1593 aaKnown RBP25.62■■□□□ 1.69
CD74-202ENST00000353334 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
CD74-202ENST00000353334 BAZ1AQ9NRL2 1556 aaPredicted RBP25.49■■□□□ 1.67
CD74-202ENST00000353334 LAMC3Q9Y6N6 1575 aa25.46■■□□□ 1.67
CD74-202ENST00000353334 KIF21AQ7Z4S6 1674 aa25.46■■□□□ 1.67
CD74-202ENST00000353334 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
CD74-202ENST00000353334 TRIM41Q8WV44 630 aa25.33■■□□□ 1.65
CD74-202ENST00000353334 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
CD74-202ENST00000353334 PDS5BQ9NTI5 1447 aa25.3■■□□□ 1.64
CD74-202ENST00000353334 MRC2Q9UBG0 1479 aa25.17■■□□□ 1.62
CD74-202ENST00000353334 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
CD74-202ENST00000353334 WDR62O43379 1518 aa25.13■■□□□ 1.61
CD74-202ENST00000353334 WIZO95785 1651 aa25.01■■□□□ 1.59
CD74-202ENST00000353334 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
CD74-202ENST00000353334 FANCD2Q9BXW9 1451 aa24.9■■□□□ 1.58
CD74-202ENST00000353334 OSCARQ8IYS5 282 aa24.81■■□□□ 1.56
CD74-202ENST00000353334 CFTRP13569 1480 aa24.77■■□□□ 1.56
CD74-202ENST00000353334 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
CD74-202ENST00000353334 RIMBP3CA6NJZ7 1639 aa24.65■■□□□ 1.54
CD74-202ENST00000353334 RIMBP3BA6NNM3 1639 aa24.65■■□□□ 1.54
CD74-202ENST00000353334 RIMBP3Q9UFD9 1639 aa24.65■■□□□ 1.54
CD74-202ENST00000353334 TOP2AP11388 1531 aaKnown RBP24.62■■□□□ 1.53
CD74-202ENST00000353334 RSF1Q96T23 1441 aaPredicted RBP24.59■■□□□ 1.53
CD74-202ENST00000353334 PRDM2Q13029 1718 aa24.54■■□□□ 1.52
CD74-202ENST00000353334 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
CD74-202ENST00000353334 ARHGEF11O15085 1522 aa24.5■■□□□ 1.51
CD74-202ENST00000353334 IFT140Q96RY7 1462 aa24.46■■□□□ 1.51
CD74-202ENST00000353334 TOPBP1Q92547 1522 aa24.39■■□□□ 1.49
CD74-202ENST00000353334 EIF4G3O43432 1585 aaKnown RBP24.38■■□□□ 1.49
CD74-202ENST00000353334 CCDC88BA6NC98 1476 aa24.34■■□□□ 1.49
CD74-202ENST00000353334 CHD1O14646 1710 aa24.31■■□□□ 1.48
CD74-202ENST00000353334 CYB5RLQ6IPT4 315 aa24.3■■□□□ 1.48
CD74-202ENST00000353334 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
CD74-202ENST00000353334 ARAP1Q96P48 1450 aa24.24■■□□□ 1.47
CD74-202ENST00000353334 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.47
CD74-202ENST00000353334 TARBP1Q13395 1621 aaKnown RBP24.22■■□□□ 1.47
CD74-202ENST00000353334 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
CD74-202ENST00000353334 TRHP20396 242 aaPredicted RBP24.18■■□□□ 1.46
CD74-202ENST00000353334 FBLN2P98095 1184 aa24.14■■□□□ 1.45
CD74-202ENST00000353334 POLA1P09884 1462 aaPredicted RBP24.1■■□□□ 1.45
CD74-202ENST00000353334 RAD54L2Q9Y4B4 1467 aa24.05■■□□□ 1.44
CD74-202ENST00000353334 TDRD9Q8NDG6 1382 aaKnown RBP24■■□□□ 1.43
CD74-202ENST00000353334 CLASP1Q7Z460 1538 aa23.98■■□□□ 1.43
CD74-202ENST00000353334 SNAPC4Q5SXM2 1469 aa23.98■■□□□ 1.43
CD74-202ENST00000353334 SOGA1O94964 1423 aa23.95■■□□□ 1.42
CD74-202ENST00000353334 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
CD74-202ENST00000353334 SYNJ1O43426 1573 aa23.89■■□□□ 1.41
CD74-202ENST00000353334 WDR97A6NE52 1622 aa23.86■■□□□ 1.41
CD74-202ENST00000353334 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
CD74-202ENST00000353334 MAGI1Q96QZ7 1491 aaPredicted RBP23.84■■□□□ 1.41
CD74-202ENST00000353334 CUX1P39880 1505 aa23.82■■□□□ 1.4
CD74-202ENST00000353334 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
CD74-202ENST00000353334 GRIN2BQ13224 1484 aa23.8■■□□□ 1.4
CD74-202ENST00000353334 SYNJ2O15056 1496 aa23.78■■□□□ 1.4
CD74-202ENST00000353334 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
CD74-202ENST00000353334 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
CD74-202ENST00000353334 ERCC6L2Q5T890 1561 aa23.63■■□□□ 1.37
CD74-202ENST00000353334 ABCA5Q8WWZ7 1642 aa23.62■■□□□ 1.37
CD74-202ENST00000353334 ABCA10Q8WWZ4 1543 aa23.56■■□□□ 1.36
CD74-202ENST00000353334 GRIN2AQ12879 1464 aa23.52■■□□□ 1.36
CD74-202ENST00000353334 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
CD74-202ENST00000353334 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
CD74-202ENST00000353334 NUP160Q12769 1436 aa23.45■■□□□ 1.34
CD74-202ENST00000353334 SHROOM2Q13796 1616 aa23.43■■□□□ 1.34
CD74-202ENST00000353334 KIF13AQ9H1H9 1805 aa23.41■■□□□ 1.34
CD74-202ENST00000353334 WRNQ14191 1432 aaPredicted RBP eCLIP23.36■■□□□ 1.33
CD74-202ENST00000353334 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.32
CD74-202ENST00000353334 BIVM-ERCC5R4GMW8 1640 aa23.29■■□□□ 1.32
CD74-202ENST00000353334 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
CD74-202ENST00000353334 PRG4Q92954 1404 aaPredicted RBP23.26■■□□□ 1.31
CD74-202ENST00000353334 ERICH3Q5RHP9 1530 aa23.25■■□□□ 1.31
CD74-202ENST00000353334 RUSC2Q8N2Y8 1516 aa23.17■■□□□ 1.3
CD74-202ENST00000353334 ABCC10Q5T3U5 1492 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms