RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 NISCHQ9Y2I1 1504 aa24.93■■□□□ 1.58
SIRPA-204ENST00000622179 DCAF8L2P0C7V8 631 aa23.5■■□□□ 1.35
SIRPA-204ENST00000622179 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
SIRPA-204ENST00000622179 SUPT5HO00267 1087 aaKnown RBP22.86■■□□□ 1.25
SIRPA-204ENST00000622179 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
SIRPA-204ENST00000622179 FAM9AQ8IZU1 332 aaPredicted RBP21.39■■□□□ 1.01
SIRPA-204ENST00000622179 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
SIRPA-204ENST00000622179 TRIM41Q8WV44 630 aa21.13■□□□□ 0.97
SIRPA-204ENST00000622179 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
SIRPA-204ENST00000622179 LOC105371045A0A1W2PR82 267 aa20.93■□□□□ 0.94
SIRPA-204ENST00000622179 TTBK1Q5TCY1 1321 aaPredicted RBP20.89■□□□□ 0.93
SIRPA-204ENST00000622179 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
SIRPA-204ENST00000622179 ABCC9O60706 1549 aa20.73■□□□□ 0.91
SIRPA-204ENST00000622179 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
SIRPA-204ENST00000622179 RANGAP1P46060 587 aaPredicted RBP20.62■□□□□ 0.89
SIRPA-204ENST00000622179 CCDC180Q9P1Z9 1646 aa20.58■□□□□ 0.89
SIRPA-204ENST00000622179 APLP2Q06481 763 aa20.58■□□□□ 0.89
SIRPA-204ENST00000622179 HRCP23327 699 aa20.56■□□□□ 0.88
SIRPA-204ENST00000622179 UBTFP17480 764 aaKnown RBP20.54■□□□□ 0.88
SIRPA-204ENST00000622179 TRIM26Q12899 539 aaPredicted RBP20.53■□□□□ 0.88
SIRPA-204ENST00000622179 CCER1Q8TC90 406 aaPredicted RBP20.42■□□□□ 0.86
SIRPA-204ENST00000622179 ZEB1P37275 1124 aaPredicted RBP20.39■□□□□ 0.85
SIRPA-204ENST00000622179 PABPN1Q86U42 306 aaKnown RBP eCLIP20.36■□□□□ 0.85
SIRPA-204ENST00000622179 SCRIBQ14160 1630 aa20.29■□□□□ 0.84
SIRPA-204ENST00000622179 MYO15BQ96JP2 1530 aa20.13■□□□□ 0.81
SIRPA-204ENST00000622179 ATP1B4Q9UN42 357 aaPredicted RBP20.08■□□□□ 0.8
SIRPA-204ENST00000622179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20■□□□□ 0.79
SIRPA-204ENST00000622179 RSF1Q96T23 1441 aaPredicted RBP19.94■□□□□ 0.78
SIRPA-204ENST00000622179 HNRNPUL2Q1KMD3 747 aaKnown RBP19.93■□□□□ 0.78
SIRPA-204ENST00000622179 DCAF1Q9Y4B6 1507 aa19.87■□□□□ 0.77
SIRPA-204ENST00000622179 CENPBP07199 599 aaPredicted RBP19.83■□□□□ 0.76
SIRPA-204ENST00000622179 ITGAEP38570 1179 aa19.8■□□□□ 0.76
SIRPA-204ENST00000622179 YTHDC1Q96MU7 727 aaKnown RBP19.79■□□□□ 0.76
SIRPA-204ENST00000622179 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
SIRPA-204ENST00000622179 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
SIRPA-204ENST00000622179 NACADO15069 1562 aa19.65■□□□□ 0.74
SIRPA-204ENST00000622179 RB1CC1Q8TDY2 1594 aa19.6■□□□□ 0.73
SIRPA-204ENST00000622179 DIEXFQ68CQ4 756 aaKnown RBP19.55■□□□□ 0.72
SIRPA-204ENST00000622179 PELP1Q8IZL8 1130 aaKnown RBP19.51■□□□□ 0.71
SIRPA-204ENST00000622179 MROH2BQ7Z745 1585 aa19.43■□□□□ 0.7
SIRPA-204ENST00000622179 FAM50AQ14320 339 aaKnown RBP19.37■□□□□ 0.69
SIRPA-204ENST00000622179 BAZ1AQ9NRL2 1556 aaPredicted RBP19.34■□□□□ 0.69
SIRPA-204ENST00000622179 P3H3Q8IVL6 736 aa19.33■□□□□ 0.69
SIRPA-204ENST00000622179 ZNF316A6NFI3 1004 aaPredicted RBP19.24■□□□□ 0.67
SIRPA-204ENST00000622179 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
SIRPA-204ENST00000622179 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
SIRPA-204ENST00000622179 NEUROD1Q13562 356 aa19.21■□□□□ 0.67
SIRPA-204ENST00000622179 WIZO95785 1651 aa19.2■□□□□ 0.66
SIRPA-204ENST00000622179 SOGA1O94964 1423 aa19.17■□□□□ 0.66
SIRPA-204ENST00000622179 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
SIRPA-204ENST00000622179 CLIP1P30622 1438 aa19.15■□□□□ 0.66
SIRPA-204ENST00000622179 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
SIRPA-204ENST00000622179 ABCC8Q09428 1581 aa19.14■□□□□ 0.65
SIRPA-204ENST00000622179 EEA1Q15075 1411 aa19.11■□□□□ 0.65
SIRPA-204ENST00000622179 GTF3C3Q9Y5Q9 886 aa19.11■□□□□ 0.65
SIRPA-204ENST00000622179 TNIKQ9UKE5 1360 aa19.1■□□□□ 0.65
SIRPA-204ENST00000622179 GOLGA3Q08378 1498 aa19.1■□□□□ 0.65
SIRPA-204ENST00000622179 NEFLP07196 543 aa19.08■□□□□ 0.64
SIRPA-204ENST00000622179 ARID3CA6NKF2 412 aa19.06■□□□□ 0.64
SIRPA-204ENST00000622179 POLR3GLQ9BT43 218 aa19.03■□□□□ 0.64
SIRPA-204ENST00000622179 CNGB1Q14028 1251 aaPredicted RBP19.03■□□□□ 0.64
SIRPA-204ENST00000622179 TRIM52Q96A61 297 aa19.02■□□□□ 0.63
SIRPA-204ENST00000622179 ACIN1Q9UKV3 1341 aaKnown RBP19.01■□□□□ 0.63
SIRPA-204ENST00000622179 FBLN2P98095 1184 aa18.96■□□□□ 0.63
SIRPA-204ENST00000622179 CEP164Q9UPV0 1460 aa18.95■□□□□ 0.62
SIRPA-204ENST00000622179 TOP2AP11388 1531 aaKnown RBP18.94■□□□□ 0.62
SIRPA-204ENST00000622179 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
SIRPA-204ENST00000622179 KIF27Q86VH2 1401 aa18.84■□□□□ 0.61
SIRPA-204ENST00000622179 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
SIRPA-204ENST00000622179 SCAF1Q9H7N4 1312 aaKnown RBP18.81■□□□□ 0.6
SIRPA-204ENST00000622179 MIER1Q8N108 512 aa18.81■□□□□ 0.6
SIRPA-204ENST00000622179 MYT1LQ9UL68 1186 aa18.8■□□□□ 0.6
SIRPA-204ENST00000622179 ZNF326Q5BKZ1 582 aaKnown RBP18.75■□□□□ 0.59
SIRPA-204ENST00000622179 ANP32CO43423 234 aa18.74■□□□□ 0.59
SIRPA-204ENST00000622179 BCANQ96GW7 911 aa18.74■□□□□ 0.59
SIRPA-204ENST00000622179 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
SIRPA-204ENST00000622179 SMARCA2P51531 1590 aa18.73■□□□□ 0.59
SIRPA-204ENST00000622179 CHIC2Q9UKJ5 165 aa18.73■□□□□ 0.59
SIRPA-204ENST00000622179 ERICH6Q7L0X2 663 aa18.73■□□□□ 0.59
SIRPA-204ENST00000622179 DDX10Q13206 875 aaKnown RBP18.71■□□□□ 0.59
SIRPA-204ENST00000622179 ZNF777Q9ULD5 760 aaPredicted RBP18.71■□□□□ 0.59
SIRPA-204ENST00000622179 KANK4Q5T7N3 995 aaPredicted RBP18.68■□□□□ 0.58
SIRPA-204ENST00000622179 VPS8Q8N3P4 1428 aa18.68■□□□□ 0.58
SIRPA-204ENST00000622179 HIRIP3Q9BW71 556 aaPredicted RBP18.67■□□□□ 0.58
SIRPA-204ENST00000622179 MTUS2Q5JR59 1369 aa18.67■□□□□ 0.58
SIRPA-204ENST00000622179 CUX2O14529 1486 aa18.66■□□□□ 0.58
SIRPA-204ENST00000622179 TONSLQ96HA7 1378 aa18.64■□□□□ 0.57
SIRPA-204ENST00000622179 RAPGEF2Q9Y4G8 1499 aa18.62■□□□□ 0.57
SIRPA-204ENST00000622179 CARMIL1Q5VZK9 1371 aa18.61■□□□□ 0.57
SIRPA-204ENST00000622179 CDK11AQ9UQ88 783 aaPredicted RBP18.59■□□□□ 0.57
SIRPA-204ENST00000622179 RRP7BPQ9NSQ0 103 aa18.56■□□□□ 0.56
SIRPA-204ENST00000622179 CCNB3Q8WWL7 1395 aa18.53■□□□□ 0.56
SIRPA-204ENST00000622179 SIN3AQ96ST3 1273 aa18.53■□□□□ 0.56
SIRPA-204ENST00000622179 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
SIRPA-204ENST00000622179 CADPSQ9ULU8 1353 aa18.44■□□□□ 0.54
SIRPA-204ENST00000622179 CLSPNQ9HAW4 1339 aa18.41■□□□□ 0.54
SIRPA-204ENST00000622179 FKBP8Q14318 412 aa18.4■□□□□ 0.54
SIRPA-204ENST00000622179 TDRD9Q8NDG6 1382 aaKnown RBP18.4■□□□□ 0.54
SIRPA-204ENST00000622179 FHAD1B1AJZ9 1412 aa18.4■□□□□ 0.54
SIRPA-204ENST00000622179 HNRNPUQ00839 825 aaKnown RBP eCLIP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms