RNA–Protein interactions for RNA: ENST00000617678.2

TBC1D3L-202, Transcript of TBC1 domain family member 3L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBC1D3L, Length 2,065 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3L-202ENST00000617678 NISCHQ9Y2I1 1504 aa33.22■■■□□ 2.91
TBC1D3L-202ENST00000617678 CCDC180Q9P1Z9 1646 aa28.61■■■□□ 2.17
TBC1D3L-202ENST00000617678 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
TBC1D3L-202ENST00000617678 SHROOM4Q9ULL8 1493 aa27.68■■■□□ 2.02
TBC1D3L-202ENST00000617678 DCAF8L2P0C7V8 631 aa27.45■■□□□ 1.98
TBC1D3L-202ENST00000617678 DCAF1Q9Y4B6 1507 aa27.39■■□□□ 1.98
TBC1D3L-202ENST00000617678 SUPT5HO00267 1087 aaKnown RBP26.88■■□□□ 1.89
TBC1D3L-202ENST00000617678 MYO15BQ96JP2 1530 aa26.85■■□□□ 1.89
TBC1D3L-202ENST00000617678 ABCC9O60706 1549 aa26.78■■□□□ 1.88
TBC1D3L-202ENST00000617678 NACADO15069 1562 aa26.57■■□□□ 1.84
TBC1D3L-202ENST00000617678 SCRIBQ14160 1630 aa26.55■■□□□ 1.84
TBC1D3L-202ENST00000617678 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
TBC1D3L-202ENST00000617678 RSF1Q96T23 1441 aaPredicted RBP26.03■■□□□ 1.76
TBC1D3L-202ENST00000617678 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
TBC1D3L-202ENST00000617678 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
TBC1D3L-202ENST00000617678 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
TBC1D3L-202ENST00000617678 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
TBC1D3L-202ENST00000617678 BAZ1AQ9NRL2 1556 aaPredicted RBP25.6■■□□□ 1.69
TBC1D3L-202ENST00000617678 WIZO95785 1651 aa25.53■■□□□ 1.68
TBC1D3L-202ENST00000617678 BICRAQ9NZM4 1560 aa25.45■■□□□ 1.67
TBC1D3L-202ENST00000617678 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
TBC1D3L-202ENST00000617678 PABPN1Q86U42 306 aaKnown RBP eCLIP25.41■■□□□ 1.66
TBC1D3L-202ENST00000617678 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
TBC1D3L-202ENST00000617678 TRIM41Q8WV44 630 aa25.18■■□□□ 1.62
TBC1D3L-202ENST00000617678 CCDC88BA6NC98 1476 aa25.05■■□□□ 1.6
TBC1D3L-202ENST00000617678 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
TBC1D3L-202ENST00000617678 EIF4G1Q04637 1599 aaKnown RBP25.04■■□□□ 1.6
TBC1D3L-202ENST00000617678 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
TBC1D3L-202ENST00000617678 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
TBC1D3L-202ENST00000617678 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.58
TBC1D3L-202ENST00000617678 FAM9AQ8IZU1 332 aaPredicted RBP24.82■■□□□ 1.56
TBC1D3L-202ENST00000617678 BAZ1BQ9UIG0 1483 aaKnown RBP24.8■■□□□ 1.56
TBC1D3L-202ENST00000617678 ABCC8Q09428 1581 aa24.74■■□□□ 1.55
TBC1D3L-202ENST00000617678 NCAPD3P42695 1498 aa24.55■■□□□ 1.52
TBC1D3L-202ENST00000617678 HMGXB3Q12766 1538 aa24.55■■□□□ 1.52
TBC1D3L-202ENST00000617678 EHMT2Q96KQ7 1210 aa24.52■■□□□ 1.52
TBC1D3L-202ENST00000617678 WRNQ14191 1432 aaPredicted RBP eCLIP24.49■■□□□ 1.51
TBC1D3L-202ENST00000617678 PCGF6Q9BYE7 350 aa24.47■■□□□ 1.51
TBC1D3L-202ENST00000617678 SOGA1O94964 1423 aa24.4■■□□□ 1.5
TBC1D3L-202ENST00000617678 EEA1Q15075 1411 aa24.37■■□□□ 1.49
TBC1D3L-202ENST00000617678 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
TBC1D3L-202ENST00000617678 TRIM26Q12899 539 aaPredicted RBP24.26■■□□□ 1.47
TBC1D3L-202ENST00000617678 RUSC2Q8N2Y8 1516 aa24.26■■□□□ 1.47
TBC1D3L-202ENST00000617678 CSRNP3Q8WYN3 585 aa24.25■■□□□ 1.47
TBC1D3L-202ENST00000617678 CFTRP13569 1480 aa24.18■■□□□ 1.46
TBC1D3L-202ENST00000617678 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
TBC1D3L-202ENST00000617678 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
TBC1D3L-202ENST00000617678 HRCP23327 699 aa24.17■■□□□ 1.46
TBC1D3L-202ENST00000617678 TNIKQ9UKE5 1360 aa24.12■■□□□ 1.45
TBC1D3L-202ENST00000617678 GOLGA3Q08378 1498 aa24.11■■□□□ 1.45
TBC1D3L-202ENST00000617678 BIVM-ERCC5R4GMW8 1640 aa24.1■■□□□ 1.45
TBC1D3L-202ENST00000617678 CEP162Q5TB80 1403 aa24.08■■□□□ 1.45
TBC1D3L-202ENST00000617678 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
TBC1D3L-202ENST00000617678 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
TBC1D3L-202ENST00000617678 CUX1P39880 1505 aa24.02■■□□□ 1.44
TBC1D3L-202ENST00000617678 KIF21BO75037 1637 aa24.01■■□□□ 1.43
TBC1D3L-202ENST00000617678 CADPSQ9ULU8 1353 aa24■■□□□ 1.43
TBC1D3L-202ENST00000617678 PRDM2Q13029 1718 aa23.96■■□□□ 1.43
TBC1D3L-202ENST00000617678 PPARGC1BQ86YN6 1023 aaKnown RBP23.87■■□□□ 1.41
TBC1D3L-202ENST00000617678 RAPGEF2Q9Y4G8 1499 aa23.86■■□□□ 1.41
TBC1D3L-202ENST00000617678 KIF27Q86VH2 1401 aa23.82■■□□□ 1.4
TBC1D3L-202ENST00000617678 PRXQ9BXM0 1461 aa23.77■■□□□ 1.4
TBC1D3L-202ENST00000617678 CLIP1P30622 1438 aa23.77■■□□□ 1.4
TBC1D3L-202ENST00000617678 FANCD2Q9BXW9 1451 aa23.76■■□□□ 1.39
TBC1D3L-202ENST00000617678 ERICH3Q5RHP9 1530 aa23.75■■□□□ 1.39
TBC1D3L-202ENST00000617678 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
TBC1D3L-202ENST00000617678 NESP48681 1621 aa23.67■■□□□ 1.38
TBC1D3L-202ENST00000617678 CUX2O14529 1486 aa23.66■■□□□ 1.38
TBC1D3L-202ENST00000617678 TTBK1Q5TCY1 1321 aaPredicted RBP23.62■■□□□ 1.37
TBC1D3L-202ENST00000617678 VPS8Q8N3P4 1428 aa23.61■■□□□ 1.37
TBC1D3L-202ENST00000617678 LAMC3Q9Y6N6 1575 aa23.61■■□□□ 1.37
TBC1D3L-202ENST00000617678 DNMBPQ6XZF7 1577 aa23.6■■□□□ 1.37
TBC1D3L-202ENST00000617678 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
TBC1D3L-202ENST00000617678 IGF1RP08069 1367 aa23.55■■□□□ 1.36
TBC1D3L-202ENST00000617678 ZEB1P37275 1124 aaPredicted RBP23.55■■□□□ 1.36
TBC1D3L-202ENST00000617678 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
TBC1D3L-202ENST00000617678 DNAJC5BQ9UF47 199 aa23.52■■□□□ 1.35
TBC1D3L-202ENST00000617678 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
TBC1D3L-202ENST00000617678 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
TBC1D3L-202ENST00000617678 RAD54L2Q9Y4B4 1467 aa23.46■■□□□ 1.35
TBC1D3L-202ENST00000617678 CARMIL1Q5VZK9 1371 aa23.45■■□□□ 1.34
TBC1D3L-202ENST00000617678 ABCA10Q8WWZ4 1543 aa23.45■■□□□ 1.34
TBC1D3L-202ENST00000617678 ARAP1Q96P48 1450 aa23.45■■□□□ 1.34
TBC1D3L-202ENST00000617678 APLP2Q06481 763 aa23.44■■□□□ 1.34
TBC1D3L-202ENST00000617678 URB2Q14146 1524 aaKnown RBP23.43■■□□□ 1.34
TBC1D3L-202ENST00000617678 ARHGAP35Q9NRY4 1499 aa23.34■■□□□ 1.33
TBC1D3L-202ENST00000617678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.31■■□□□ 1.32
TBC1D3L-202ENST00000617678 KIF21AQ7Z4S6 1674 aa23.3■■□□□ 1.32
TBC1D3L-202ENST00000617678 CCER1Q8TC90 406 aaPredicted RBP23.27■■□□□ 1.32
TBC1D3L-202ENST00000617678 WDR97A6NE52 1622 aa23.27■■□□□ 1.32
TBC1D3L-202ENST00000617678 CUL7Q14999 1698 aa23.25■■□□□ 1.31
TBC1D3L-202ENST00000617678 TDRD9Q8NDG6 1382 aaKnown RBP23.2■■□□□ 1.3
TBC1D3L-202ENST00000617678 ABCA5Q8WWZ7 1642 aa23.19■■□□□ 1.3
TBC1D3L-202ENST00000617678 GAPVD1Q14C86 1478 aa23.17■■□□□ 1.3
TBC1D3L-202ENST00000617678 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
TBC1D3L-202ENST00000617678 MRC2Q9UBG0 1479 aa23.14■■□□□ 1.29
TBC1D3L-202ENST00000617678 HNRNPUL2Q1KMD3 747 aaKnown RBP23.12■■□□□ 1.29
TBC1D3L-202ENST00000617678 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
TBC1D3L-202ENST00000617678 FHAD1B1AJZ9 1412 aa23.06■■□□□ 1.28
TBC1D3L-202ENST00000617678 EFCAB5A4FU69 1503 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms