Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 BTBD7P1-201ENST00000447253 1453 ntBASIC15.11■□□□□ 0.01
RAPH1Q70E73 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 HSPA7-201ENST00000445535 1927 ntBASIC15.11■□□□□ 0.01
RAPH1Q70E73 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 CLK3P2-201ENST00000427566 1453 ntBASIC15.1■□□□□ 0.01
RAPH1Q70E73 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAPH1Q70E73 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAPH1Q70E73 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.09■□□□□ 0.01
RAPH1Q70E73 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.09■□□□□ 0.01
RAPH1Q70E73 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAPH1Q70E73 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAPH1Q70E73 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAPH1Q70E73 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAPH1Q70E73 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAPH1Q70E73 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAPH1Q70E73 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAPH1Q70E73 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RAPH1Q70E73 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RAPH1Q70E73 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAPH1Q70E73 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAPH1Q70E73 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms