RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 NISCHQ9Y2I1 1504 aa26.38■■□□□ 1.81
LINC02538-201ENST00000609107 DCAF8L2P0C7V8 631 aa24.72■■□□□ 1.55
LINC02538-201ENST00000609107 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
LINC02538-201ENST00000609107 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
LINC02538-201ENST00000609107 EHMT2Q96KQ7 1210 aa22.64■■□□□ 1.21
LINC02538-201ENST00000609107 PCGF6Q9BYE7 350 aa22.59■■□□□ 1.21
LINC02538-201ENST00000609107 FAM9AQ8IZU1 332 aaPredicted RBP22.52■■□□□ 1.19
LINC02538-201ENST00000609107 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
LINC02538-201ENST00000609107 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
LINC02538-201ENST00000609107 ZEB1P37275 1124 aaPredicted RBP22.19■■□□□ 1.14
LINC02538-201ENST00000609107 APLP2Q06481 763 aa22.18■■□□□ 1.14
LINC02538-201ENST00000609107 ZCCHC6Q5VYS8 1495 aaKnown RBP22.05■■□□□ 1.12
LINC02538-201ENST00000609107 HRCP23327 699 aa21.99■■□□□ 1.11
LINC02538-201ENST00000609107 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
LINC02538-201ENST00000609107 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
LINC02538-201ENST00000609107 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
LINC02538-201ENST00000609107 TTBK1Q5TCY1 1321 aaPredicted RBP21.92■■□□□ 1.1
LINC02538-201ENST00000609107 UBTFP17480 764 aaKnown RBP21.85■■□□□ 1.09
LINC02538-201ENST00000609107 CCER1Q8TC90 406 aaPredicted RBP21.85■■□□□ 1.09
LINC02538-201ENST00000609107 ABCC9O60706 1549 aa21.72■■□□□ 1.07
LINC02538-201ENST00000609107 PELP1Q8IZL8 1130 aaKnown RBP21.65■■□□□ 1.06
LINC02538-201ENST00000609107 RANGAP1P46060 587 aaPredicted RBP21.65■■□□□ 1.06
LINC02538-201ENST00000609107 PPARGC1BQ86YN6 1023 aaKnown RBP21.6■■□□□ 1.05
LINC02538-201ENST00000609107 CENPBP07199 599 aaPredicted RBP21.57■■□□□ 1.04
LINC02538-201ENST00000609107 SCRIBQ14160 1630 aa21.36■■□□□ 1.01
LINC02538-201ENST00000609107 MYT1Q01538 1121 aa21.35■■□□□ 1.01
LINC02538-201ENST00000609107 ATP1B4Q9UN42 357 aaPredicted RBP21.29■■□□□ 1
LINC02538-201ENST00000609107 PABPN1Q86U42 306 aaKnown RBP eCLIP21.25■□□□□ 0.99
LINC02538-201ENST00000609107 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
LINC02538-201ENST00000609107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.12■□□□□ 0.97
LINC02538-201ENST00000609107 HNRNPUL2Q1KMD3 747 aaKnown RBP21.11■□□□□ 0.97
LINC02538-201ENST00000609107 MYO15BQ96JP2 1530 aa21.08■□□□□ 0.96
LINC02538-201ENST00000609107 YTHDC1Q96MU7 727 aaKnown RBP21.04■□□□□ 0.96
LINC02538-201ENST00000609107 RSF1Q96T23 1441 aaPredicted RBP21.04■□□□□ 0.96
LINC02538-201ENST00000609107 CSRNP3Q8WYN3 585 aa20.99■□□□□ 0.95
LINC02538-201ENST00000609107 NACADO15069 1562 aa20.93■□□□□ 0.94
LINC02538-201ENST00000609107 ITGAEP38570 1179 aa20.92■□□□□ 0.94
LINC02538-201ENST00000609107 DIEXFQ68CQ4 756 aaKnown RBP20.91■□□□□ 0.94
LINC02538-201ENST00000609107 RB1CC1Q8TDY2 1594 aa20.86■□□□□ 0.93
LINC02538-201ENST00000609107 NEFLP07196 543 aa20.76■□□□□ 0.91
LINC02538-201ENST00000609107 ZNF316A6NFI3 1004 aaPredicted RBP20.63■□□□□ 0.89
LINC02538-201ENST00000609107 FAM50AQ14320 339 aaKnown RBP20.59■□□□□ 0.89
LINC02538-201ENST00000609107 EEA1Q15075 1411 aa20.59■□□□□ 0.89
LINC02538-201ENST00000609107 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.89
LINC02538-201ENST00000609107 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.88
LINC02538-201ENST00000609107 ERICH6Q7L0X2 663 aa20.48■□□□□ 0.87
LINC02538-201ENST00000609107 CEP162Q5TB80 1403 aa20.43■□□□□ 0.86
LINC02538-201ENST00000609107 GOLGA3Q08378 1498 aa20.43■□□□□ 0.86
LINC02538-201ENST00000609107 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
LINC02538-201ENST00000609107 WRNQ14191 1432 aaPredicted RBP eCLIP20.41■□□□□ 0.86
LINC02538-201ENST00000609107 GTF3C3Q9Y5Q9 886 aa20.41■□□□□ 0.86
LINC02538-201ENST00000609107 ACIN1Q9UKV3 1341 aaKnown RBP20.41■□□□□ 0.86
LINC02538-201ENST00000609107 CLIP1P30622 1438 aa20.39■□□□□ 0.86
LINC02538-201ENST00000609107 TNIKQ9UKE5 1360 aa20.39■□□□□ 0.85
LINC02538-201ENST00000609107 NEUROD1Q13562 356 aa20.37■□□□□ 0.85
LINC02538-201ENST00000609107 BAZ1BQ9UIG0 1483 aaKnown RBP20.32■□□□□ 0.84
LINC02538-201ENST00000609107 P3H3Q8IVL6 736 aa20.31■□□□□ 0.84
LINC02538-201ENST00000609107 TRIM52Q96A61 297 aa20.28■□□□□ 0.84
LINC02538-201ENST00000609107 CEP164Q9UPV0 1460 aa20.27■□□□□ 0.84
LINC02538-201ENST00000609107 POLR3GLQ9BT43 218 aa20.24■□□□□ 0.83
LINC02538-201ENST00000609107 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
LINC02538-201ENST00000609107 ANP32CO43423 234 aa20.19■□□□□ 0.82
LINC02538-201ENST00000609107 WIZO95785 1651 aa20.15■□□□□ 0.82
LINC02538-201ENST00000609107 SOGA1O94964 1423 aa20.15■□□□□ 0.82
LINC02538-201ENST00000609107 TOP2AP11388 1531 aaKnown RBP20.13■□□□□ 0.81
LINC02538-201ENST00000609107 KIF27Q86VH2 1401 aa20.1■□□□□ 0.81
LINC02538-201ENST00000609107 ABCC8Q09428 1581 aa20.08■□□□□ 0.8
LINC02538-201ENST00000609107 MYT1LQ9UL68 1186 aa20.04■□□□□ 0.8
LINC02538-201ENST00000609107 CLSPNQ9HAW4 1339 aa20.03■□□□□ 0.8
LINC02538-201ENST00000609107 CNGB1Q14028 1251 aaPredicted RBP20.02■□□□□ 0.8
LINC02538-201ENST00000609107 CDK11AQ9UQ88 783 aaPredicted RBP19.99■□□□□ 0.79
LINC02538-201ENST00000609107 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
LINC02538-201ENST00000609107 SMARCA2P51531 1590 aa19.98■□□□□ 0.79
LINC02538-201ENST00000609107 FBLN2P98095 1184 aa19.97■□□□□ 0.79
LINC02538-201ENST00000609107 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
LINC02538-201ENST00000609107 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
LINC02538-201ENST00000609107 ARID3CA6NKF2 412 aa19.94■□□□□ 0.78
LINC02538-201ENST00000609107 MIER1Q8N108 512 aa19.93■□□□□ 0.78
LINC02538-201ENST00000609107 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
LINC02538-201ENST00000609107 VPS8Q8N3P4 1428 aa19.92■□□□□ 0.78
LINC02538-201ENST00000609107 BCANQ96GW7 911 aa19.91■□□□□ 0.78
LINC02538-201ENST00000609107 ZNF326Q5BKZ1 582 aaKnown RBP19.89■□□□□ 0.77
LINC02538-201ENST00000609107 DDX10Q13206 875 aaKnown RBP19.86■□□□□ 0.77
LINC02538-201ENST00000609107 ZNF777Q9ULD5 760 aaPredicted RBP19.8■□□□□ 0.76
LINC02538-201ENST00000609107 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.76
LINC02538-201ENST00000609107 CCNB3Q8WWL7 1395 aa19.76■□□□□ 0.75
LINC02538-201ENST00000609107 CUX2O14529 1486 aa19.76■□□□□ 0.75
LINC02538-201ENST00000609107 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
LINC02538-201ENST00000609107 CHIC2Q9UKJ5 165 aa19.75■□□□□ 0.75
LINC02538-201ENST00000609107 FHAD1B1AJZ9 1412 aa19.75■□□□□ 0.75
LINC02538-201ENST00000609107 DAXXQ9UER7 740 aaPredicted RBP19.72■□□□□ 0.75
LINC02538-201ENST00000609107 FKBP8Q14318 412 aa19.68■□□□□ 0.74
LINC02538-201ENST00000609107 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
LINC02538-201ENST00000609107 HNRNPUQ00839 825 aaKnown RBP eCLIP19.64■□□□□ 0.73
LINC02538-201ENST00000609107 RAPGEF2Q9Y4G8 1499 aa19.62■□□□□ 0.73
LINC02538-201ENST00000609107 KANK4Q5T7N3 995 aaPredicted RBP19.62■□□□□ 0.73
LINC02538-201ENST00000609107 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
LINC02538-201ENST00000609107 SLC4A1APQ9BWU0 796 aaKnown RBP19.6■□□□□ 0.73
LINC02538-201ENST00000609107 CHMP7Q8WUX9 453 aaPredicted RBP19.58■□□□□ 0.73
LINC02538-201ENST00000609107 EIF4G2P78344 907 aaKnown RBP eCLIP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms