RNA–Protein interactions for RNA: ENST00000369702.4

DDX20-201, Transcript of DEAD-box helicase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX20, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX20-201ENST00000369702 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
DDX20-201ENST00000369702 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.54
DDX20-201ENST00000369702 SUPT5HO00267 1087 aaKnown RBP24.69■■□□□ 1.54
DDX20-201ENST00000369702 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
DDX20-201ENST00000369702 PCGF6Q9BYE7 350 aa23.83■■□□□ 1.4
DDX20-201ENST00000369702 HRCP23327 699 aa23.58■■□□□ 1.37
DDX20-201ENST00000369702 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
DDX20-201ENST00000369702 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
DDX20-201ENST00000369702 EHMT2Q96KQ7 1210 aa23.21■■□□□ 1.31
DDX20-201ENST00000369702 LOC105371045A0A1W2PR82 267 aa23.12■■□□□ 1.29
DDX20-201ENST00000369702 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
DDX20-201ENST00000369702 TRIM26Q12899 539 aaPredicted RBP22.9■■□□□ 1.26
DDX20-201ENST00000369702 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
DDX20-201ENST00000369702 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
DDX20-201ENST00000369702 ZEB1P37275 1124 aaPredicted RBP22.77■■□□□ 1.23
DDX20-201ENST00000369702 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
DDX20-201ENST00000369702 PELP1Q8IZL8 1130 aaKnown RBP22.52■■□□□ 1.2
DDX20-201ENST00000369702 TTBK1Q5TCY1 1321 aaPredicted RBP22.52■■□□□ 1.2
DDX20-201ENST00000369702 DCAF1Q9Y4B6 1507 aa22.44■■□□□ 1.18
DDX20-201ENST00000369702 CCER1Q8TC90 406 aaPredicted RBP22.44■■□□□ 1.18
DDX20-201ENST00000369702 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
DDX20-201ENST00000369702 CCDC180Q9P1Z9 1646 aa22.19■■□□□ 1.14
DDX20-201ENST00000369702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.18■■□□□ 1.14
DDX20-201ENST00000369702 YTHDC1Q96MU7 727 aaKnown RBP22.02■■□□□ 1.12
DDX20-201ENST00000369702 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
DDX20-201ENST00000369702 DIEXFQ68CQ4 756 aaKnown RBP21.94■■□□□ 1.1
DDX20-201ENST00000369702 UBTFP17480 764 aaKnown RBP21.93■■□□□ 1.1
DDX20-201ENST00000369702 GTF3C3Q9Y5Q9 886 aa21.85■■□□□ 1.09
DDX20-201ENST00000369702 APLP2Q06481 763 aa21.84■■□□□ 1.09
DDX20-201ENST00000369702 ACIN1Q9UKV3 1341 aaKnown RBP21.83■■□□□ 1.09
DDX20-201ENST00000369702 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
DDX20-201ENST00000369702 SCRIBQ14160 1630 aa21.74■■□□□ 1.07
DDX20-201ENST00000369702 NEUROD1Q13562 356 aa21.73■■□□□ 1.07
DDX20-201ENST00000369702 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
DDX20-201ENST00000369702 HNRNPUL2Q1KMD3 747 aaKnown RBP21.67■■□□□ 1.06
DDX20-201ENST00000369702 MYT1Q01538 1121 aa21.63■■□□□ 1.05
DDX20-201ENST00000369702 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
DDX20-201ENST00000369702 ABCC9O60706 1549 aa21.49■■□□□ 1.03
DDX20-201ENST00000369702 RB1CC1Q8TDY2 1594 aa21.43■■□□□ 1.02
DDX20-201ENST00000369702 CSRNP3Q8WYN3 585 aa21.31■■□□□ 1
DDX20-201ENST00000369702 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
DDX20-201ENST00000369702 MIER1Q8N108 512 aa21.21■□□□□ 0.99
DDX20-201ENST00000369702 ITGAEP38570 1179 aa21.2■□□□□ 0.98
DDX20-201ENST00000369702 CEP162Q5TB80 1403 aa21.17■□□□□ 0.98
DDX20-201ENST00000369702 MROH2BQ7Z745 1585 aa21.09■□□□□ 0.97
DDX20-201ENST00000369702 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.96
DDX20-201ENST00000369702 ATP1B4Q9UN42 357 aaPredicted RBP21.03■□□□□ 0.96
DDX20-201ENST00000369702 NEFLP07196 543 aa20.98■□□□□ 0.95
DDX20-201ENST00000369702 TNIKQ9UKE5 1360 aa20.98■□□□□ 0.95
DDX20-201ENST00000369702 SOGA1O94964 1423 aa20.97■□□□□ 0.95
DDX20-201ENST00000369702 BCANQ96GW7 911 aa20.94■□□□□ 0.94
DDX20-201ENST00000369702 WIZO95785 1651 aa20.93■□□□□ 0.94
DDX20-201ENST00000369702 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
DDX20-201ENST00000369702 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
DDX20-201ENST00000369702 CLIP1P30622 1438 aa20.85■□□□□ 0.93
DDX20-201ENST00000369702 NACADO15069 1562 aa20.85■□□□□ 0.93
DDX20-201ENST00000369702 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
DDX20-201ENST00000369702 EEA1Q15075 1411 aa20.82■□□□□ 0.92
DDX20-201ENST00000369702 BAZ1AQ9NRL2 1556 aaPredicted RBP20.79■□□□□ 0.92
DDX20-201ENST00000369702 ERICH6Q7L0X2 663 aa20.77■□□□□ 0.92
DDX20-201ENST00000369702 WRNQ14191 1432 aaPredicted RBP eCLIP20.76■□□□□ 0.91
DDX20-201ENST00000369702 FAM50AQ14320 339 aaKnown RBP20.7■□□□□ 0.91
DDX20-201ENST00000369702 RUSC2Q8N2Y8 1516 aa20.68■□□□□ 0.9
DDX20-201ENST00000369702 CLSPNQ9HAW4 1339 aa20.68■□□□□ 0.9
DDX20-201ENST00000369702 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.89
DDX20-201ENST00000369702 SUPT16HQ9Y5B9 1047 aaKnown RBP20.64■□□□□ 0.89
DDX20-201ENST00000369702 FKBP8Q14318 412 aa20.63■□□□□ 0.89
DDX20-201ENST00000369702 DDX10Q13206 875 aaKnown RBP20.61■□□□□ 0.89
DDX20-201ENST00000369702 TOP2AP11388 1531 aaKnown RBP20.55■□□□□ 0.88
DDX20-201ENST00000369702 VPS8Q8N3P4 1428 aa20.54■□□□□ 0.88
DDX20-201ENST00000369702 ANP32CO43423 234 aa20.53■□□□□ 0.88
DDX20-201ENST00000369702 HIRIP3Q9BW71 556 aaPredicted RBP20.49■□□□□ 0.87
DDX20-201ENST00000369702 TRIM52Q96A61 297 aa20.49■□□□□ 0.87
DDX20-201ENST00000369702 P3H3Q8IVL6 736 aa20.48■□□□□ 0.87
DDX20-201ENST00000369702 KANK4Q5T7N3 995 aaPredicted RBP20.44■□□□□ 0.86
DDX20-201ENST00000369702 CNGB1Q14028 1251 aaPredicted RBP20.39■□□□□ 0.86
DDX20-201ENST00000369702 ANP32EQ9BTT0 268 aa20.39■□□□□ 0.86
DDX20-201ENST00000369702 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
DDX20-201ENST00000369702 TSHZ2Q9NRE2 1034 aa20.36■□□□□ 0.85
DDX20-201ENST00000369702 RAPGEF2Q9Y4G8 1499 aa20.36■□□□□ 0.85
DDX20-201ENST00000369702 SMARCA4P51532 1647 aa20.36■□□□□ 0.85
DDX20-201ENST00000369702 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
DDX20-201ENST00000369702 KCNH8Q96L42 1107 aa20.33■□□□□ 0.84
DDX20-201ENST00000369702 SIN3AQ96ST3 1273 aa20.32■□□□□ 0.84
DDX20-201ENST00000369702 CDK11AQ9UQ88 783 aaPredicted RBP20.3■□□□□ 0.84
DDX20-201ENST00000369702 CCNB3Q8WWL7 1395 aa20.28■□□□□ 0.84
DDX20-201ENST00000369702 POLR3GLQ9BT43 218 aa20.28■□□□□ 0.84
DDX20-201ENST00000369702 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
DDX20-201ENST00000369702 HNRNPUQ00839 825 aaKnown RBP eCLIP20.26■□□□□ 0.83
DDX20-201ENST00000369702 IRX6P78412 446 aaPredicted RBP20.25■□□□□ 0.83
DDX20-201ENST00000369702 TONSLQ96HA7 1378 aa20.23■□□□□ 0.83
DDX20-201ENST00000369702 KIF27Q86VH2 1401 aa20.16■□□□□ 0.82
DDX20-201ENST00000369702 RAB3GAP2Q9H2M9 1393 aa20.15■□□□□ 0.82
DDX20-201ENST00000369702 KIF21BO75037 1637 aa20.12■□□□□ 0.81
DDX20-201ENST00000369702 RBM19Q9Y4C8 960 aaKnown RBP20.11■□□□□ 0.81
DDX20-201ENST00000369702 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
DDX20-201ENST00000369702 EIF4G1Q04637 1599 aaKnown RBP20.07■□□□□ 0.8
DDX20-201ENST00000369702 FAM9BQ8IZU0 186 aa20.07■□□□□ 0.8
DDX20-201ENST00000369702 SETD5Q9C0A6 1442 aa20.04■□□□□ 0.8
DDX20-201ENST00000369702 BCL11AQ9H165 835 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms