RNA–Protein interactions for RNA: ENST00000628528.2

KCNT1-212, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene KCNT1, Length 7,057 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-212ENST00000628528 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
KCNT1-212ENST00000628528 DCAF8L2P0C7V8 631 aa22.45■■□□□ 1.18
KCNT1-212ENST00000628528 ERICH6Q7L0X2 663 aa22.11■■□□□ 1.13
KCNT1-212ENST00000628528 MYT1Q01538 1121 aa21.76■■□□□ 1.07
KCNT1-212ENST00000628528 CCER1Q8TC90 406 aaPredicted RBP21.75■■□□□ 1.07
KCNT1-212ENST00000628528 EHMT2Q96KQ7 1210 aa21.59■■□□□ 1.05
KCNT1-212ENST00000628528 SUPT5HO00267 1087 aaKnown RBP21.58■■□□□ 1.04
KCNT1-212ENST00000628528 CENPBP07199 599 aaPredicted RBP21.43■■□□□ 1.02
KCNT1-212ENST00000628528 APLP2Q06481 763 aa21.19■□□□□ 0.98
KCNT1-212ENST00000628528 NEFLP07196 543 aa21.05■□□□□ 0.96
KCNT1-212ENST00000628528 PCGF6Q9BYE7 350 aa20.98■□□□□ 0.95
KCNT1-212ENST00000628528 TTBK1Q5TCY1 1321 aaPredicted RBP20.98■□□□□ 0.95
KCNT1-212ENST00000628528 YTHDC1Q96MU7 727 aaKnown RBP20.9■□□□□ 0.94
KCNT1-212ENST00000628528 DAXXQ9UER7 740 aaPredicted RBP20.81■□□□□ 0.92
KCNT1-212ENST00000628528 ZEB1P37275 1124 aaPredicted RBP20.78■□□□□ 0.92
KCNT1-212ENST00000628528 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
KCNT1-212ENST00000628528 FAM9AQ8IZU1 332 aaPredicted RBP20.58■□□□□ 0.89
KCNT1-212ENST00000628528 RTL5Q5HYW3 569 aaPredicted RBP20.39■□□□□ 0.85
KCNT1-212ENST00000628528 RANGAP1P46060 587 aaPredicted RBP20.38■□□□□ 0.85
KCNT1-212ENST00000628528 ATP1B4Q9UN42 357 aaPredicted RBP20.3■□□□□ 0.84
KCNT1-212ENST00000628528 ZNF316A6NFI3 1004 aaPredicted RBP20.28■□□□□ 0.84
KCNT1-212ENST00000628528 POLR3GLQ9BT43 218 aa20.03■□□□□ 0.8
KCNT1-212ENST00000628528 CLSPNQ9HAW4 1339 aa20.02■□□□□ 0.8
KCNT1-212ENST00000628528 CNGB1Q14028 1251 aaPredicted RBP19.91■□□□□ 0.78
KCNT1-212ENST00000628528 HRCP23327 699 aa19.87■□□□□ 0.77
KCNT1-212ENST00000628528 UBTFP17480 764 aaKnown RBP19.86■□□□□ 0.77
KCNT1-212ENST00000628528 PPARGC1BQ86YN6 1023 aaKnown RBP19.85■□□□□ 0.77
KCNT1-212ENST00000628528 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
KCNT1-212ENST00000628528 EIF5BO60841 1220 aaKnown RBP19.78■□□□□ 0.76
KCNT1-212ENST00000628528 TRIM26Q12899 539 aaPredicted RBP19.68■□□□□ 0.74
KCNT1-212ENST00000628528 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
KCNT1-212ENST00000628528 BCANQ96GW7 911 aa19.64■□□□□ 0.73
KCNT1-212ENST00000628528 GLIPR1L2Q4G1C9 344 aa19.63■□□□□ 0.73
KCNT1-212ENST00000628528 ITGAEP38570 1179 aa19.6■□□□□ 0.73
KCNT1-212ENST00000628528 CDK11AQ9UQ88 783 aaPredicted RBP19.58■□□□□ 0.73
KCNT1-212ENST00000628528 MYT1LQ9UL68 1186 aa19.55■□□□□ 0.72
KCNT1-212ENST00000628528 DIEXFQ68CQ4 756 aaKnown RBP19.51■□□□□ 0.71
KCNT1-212ENST00000628528 GTF3C3Q9Y5Q9 886 aa19.5■□□□□ 0.71
KCNT1-212ENST00000628528 ZBTB47Q9UFB7 747 aaPredicted RBP19.44■□□□□ 0.7
KCNT1-212ENST00000628528 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
KCNT1-212ENST00000628528 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
KCNT1-212ENST00000628528 HNRNPUL2Q1KMD3 747 aaKnown RBP19.37■□□□□ 0.69
KCNT1-212ENST00000628528 BCL11AQ9H165 835 aa19.36■□□□□ 0.69
KCNT1-212ENST00000628528 ANP32BQ92688 251 aaKnown RBP19.35■□□□□ 0.69
KCNT1-212ENST00000628528 ANP32AP39687 249 aaKnown RBP19.33■□□□□ 0.69
KCNT1-212ENST00000628528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.28■□□□□ 0.68
KCNT1-212ENST00000628528 NPM2Q86SE8 214 aaKnown RBP19.26■□□□□ 0.67
KCNT1-212ENST00000628528 CANXP27824 592 aaKnown RBP19.2■□□□□ 0.66
KCNT1-212ENST00000628528 SLC24A1O60721 1099 aa19.11■□□□□ 0.65
KCNT1-212ENST00000628528 ANP32CO43423 234 aa19.11■□□□□ 0.65
KCNT1-212ENST00000628528 HSP90AA1P07900 732 aaKnown RBP19.05■□□□□ 0.64
KCNT1-212ENST00000628528 NBR1Q14596 966 aa19.03■□□□□ 0.64
KCNT1-212ENST00000628528 ARXQ96QS3 562 aa19.02■□□□□ 0.63
KCNT1-212ENST00000628528 NEUROD1Q13562 356 aa19■□□□□ 0.63
KCNT1-212ENST00000628528 LOC105371045A0A1W2PR82 267 aa18.95■□□□□ 0.62
KCNT1-212ENST00000628528 ACIN1Q9UKV3 1341 aaKnown RBP18.94■□□□□ 0.62
KCNT1-212ENST00000628528 TRIM52Q96A61 297 aa18.91■□□□□ 0.62
KCNT1-212ENST00000628528 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
KCNT1-212ENST00000628528 FAM50AQ14320 339 aaKnown RBP18.87■□□□□ 0.61
KCNT1-212ENST00000628528 UPF2Q9HAU5 1272 aaKnown RBP18.86■□□□□ 0.61
KCNT1-212ENST00000628528 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
KCNT1-212ENST00000628528 NEFMP07197 916 aa18.83■□□□□ 0.6
KCNT1-212ENST00000628528 FKBP8Q14318 412 aa18.81■□□□□ 0.6
KCNT1-212ENST00000628528 AMER1Q5JTC6 1135 aaPredicted RBP18.81■□□□□ 0.6
KCNT1-212ENST00000628528 CDK11BP21127 795 aaKnown RBP18.76■□□□□ 0.59
KCNT1-212ENST00000628528 TRIM44Q96DX7 344 aaPredicted RBP18.69■□□□□ 0.58
KCNT1-212ENST00000628528 NAP1L5Q96NT1 182 aaPredicted RBP18.55■□□□□ 0.56
KCNT1-212ENST00000628528 DNTTIP2Q5QJE6 756 aaKnown RBP18.53■□□□□ 0.56
KCNT1-212ENST00000628528 CCDC136Q96JN2 1154 aa18.53■□□□□ 0.56
KCNT1-212ENST00000628528 RTN4Q9NQC3 1192 aaKnown RBP18.51■□□□□ 0.55
KCNT1-212ENST00000628528 PTMAP06454 111 aaKnown RBP18.48■□□□□ 0.55
KCNT1-212ENST00000628528 HNRNPUQ00839 825 aaKnown RBP eCLIP18.47■□□□□ 0.55
KCNT1-212ENST00000628528 NCLP19338 710 aaKnown RBP18.47■□□□□ 0.55
KCNT1-212ENST00000628528 SALL2Q9Y467 1007 aaPredicted RBP18.44■□□□□ 0.54
KCNT1-212ENST00000628528 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.44■□□□□ 0.54
KCNT1-212ENST00000628528 FAM9BQ8IZU0 186 aa18.42■□□□□ 0.54
KCNT1-212ENST00000628528 ANP32EQ9BTT0 268 aa18.41■□□□□ 0.54
KCNT1-212ENST00000628528 ERICH6BQ5W0A0 696 aa18.4■□□□□ 0.54
KCNT1-212ENST00000628528 DDRGK1Q96HY6 314 aa18.4■□□□□ 0.54
KCNT1-212ENST00000628528 BECN1Q14457 450 aa18.37■□□□□ 0.53
KCNT1-212ENST00000628528 GOLGA6L22H0YM25 854 aa18.36■□□□□ 0.53
KCNT1-212ENST00000628528 IRX6P78412 446 aaPredicted RBP18.32■□□□□ 0.52
KCNT1-212ENST00000628528 TPRNQ4KMQ1 711 aa18.32■□□□□ 0.52
KCNT1-212ENST00000628528 ZRSR1Q15695 479 aaKnown RBP18.3■□□□□ 0.52
KCNT1-212ENST00000628528 TULP1O00294 542 aaPredicted RBP18.26■□□□□ 0.51
KCNT1-212ENST00000628528 SCAF1Q9H7N4 1312 aaKnown RBP18.26■□□□□ 0.51
KCNT1-212ENST00000628528 MYH16Q9H6N6 1097 aa18.25■□□□□ 0.51
KCNT1-212ENST00000628528 DDX10Q13206 875 aaKnown RBP18.21■□□□□ 0.5
KCNT1-212ENST00000628528 PLCB2Q00722 1185 aa18.2■□□□□ 0.5
KCNT1-212ENST00000628528 TMC1Q8TDI8 760 aa18.19■□□□□ 0.5
KCNT1-212ENST00000628528 WDR43Q15061 677 aaKnown RBP eCLIP18.15■□□□□ 0.5
KCNT1-212ENST00000628528 PPM1GO15355 546 aaPredicted RBP18.15■□□□□ 0.5
KCNT1-212ENST00000628528 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.5
KCNT1-212ENST00000628528 ARID4BQ4LE39 1312 aaPredicted RBP18.14■□□□□ 0.49
KCNT1-212ENST00000628528 GOLGA6L6A8MZA4 724 aa18.13■□□□□ 0.49
KCNT1-212ENST00000628528 CHAF1AQ13111 956 aaPredicted RBP18.1■□□□□ 0.49
KCNT1-212ENST00000628528 TNNT3P45378 269 aaPredicted RBP18.08■□□□□ 0.48
KCNT1-212ENST00000628528 TONSLQ96HA7 1378 aa18.07■□□□□ 0.48
KCNT1-212ENST00000628528 MSNP26038 577 aaKnown RBP18.05■□□□□ 0.48
KCNT1-212ENST00000628528 MRS2Q9HD23 443 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms