RNA–Protein interactions for RNA: ENST00000338487.5

DUPD1-201, Transcript of dual specificity phosphatase and pro isomerase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUPD1, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUPD1-201ENST00000338487 NISCHQ9Y2I1 1504 aa39.46■■■■□ 3.91
DUPD1-201ENST00000338487 CCDC180Q9P1Z9 1646 aa35.17■■■■□ 3.22
DUPD1-201ENST00000338487 ABCC9O60706 1549 aa34.88■■■■□ 3.17
DUPD1-201ENST00000338487 RB1CC1Q8TDY2 1594 aa33.26■■■□□ 2.92
DUPD1-201ENST00000338487 DCAF8L2P0C7V8 631 aa33.26■■■□□ 2.91
DUPD1-201ENST00000338487 NACADO15069 1562 aa33.13■■■□□ 2.89
DUPD1-201ENST00000338487 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
DUPD1-201ENST00000338487 MYO15BQ96JP2 1530 aa32.72■■■□□ 2.83
DUPD1-201ENST00000338487 UNC13AQ9UPW8 1703 aa32.69■■■□□ 2.82
DUPD1-201ENST00000338487 PABPN1Q86U42 306 aaKnown RBP eCLIP32.58■■■□□ 2.81
DUPD1-201ENST00000338487 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.79
DUPD1-201ENST00000338487 BICRAQ9NZM4 1560 aa32.37■■■□□ 2.77
DUPD1-201ENST00000338487 DNAJC5BQ9UF47 199 aa32.37■■■□□ 2.77
DUPD1-201ENST00000338487 SCRIBQ14160 1630 aa32.22■■■□□ 2.75
DUPD1-201ENST00000338487 SHROOM4Q9ULL8 1493 aa31.74■■■□□ 2.67
DUPD1-201ENST00000338487 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.63
DUPD1-201ENST00000338487 CC2D2AQ9P2K1 1620 aa31.5■■■□□ 2.63
DUPD1-201ENST00000338487 CECR2Q9BXF3 1484 aa31.3■■■□□ 2.6
DUPD1-201ENST00000338487 SMARCA4P51532 1647 aa30.72■■■□□ 2.51
DUPD1-201ENST00000338487 ATAD2BQ9ULI0 1458 aa30.61■■■□□ 2.49
DUPD1-201ENST00000338487 NCAPD3P42695 1498 aa30.57■■■□□ 2.48
DUPD1-201ENST00000338487 BAZ1AQ9NRL2 1556 aaPredicted RBP30.57■■■□□ 2.48
DUPD1-201ENST00000338487 SMARCA2P51531 1590 aa30.49■■■□□ 2.47
DUPD1-201ENST00000338487 MROH2BQ7Z745 1585 aa30.49■■■□□ 2.47
DUPD1-201ENST00000338487 HMGXB3Q12766 1538 aa30.39■■■□□ 2.46
DUPD1-201ENST00000338487 PEG3Q9GZU2 1588 aa30.33■■■□□ 2.45
DUPD1-201ENST00000338487 BAZ1BQ9UIG0 1483 aaKnown RBP30.33■■■□□ 2.45
DUPD1-201ENST00000338487 WIZO95785 1651 aa30.19■■■□□ 2.42
DUPD1-201ENST00000338487 NESP48681 1621 aa30.11■■■□□ 2.41
DUPD1-201ENST00000338487 ERCC6Q03468 1493 aa30■■■□□ 2.39
DUPD1-201ENST00000338487 RSF1Q96T23 1441 aaPredicted RBP29.97■■■□□ 2.39
DUPD1-201ENST00000338487 LAMC3Q9Y6N6 1575 aa29.82■■■□□ 2.36
DUPD1-201ENST00000338487 KIF21AQ7Z4S6 1674 aa29.75■■■□□ 2.35
DUPD1-201ENST00000338487 TOP2AP11388 1531 aaKnown RBP29.72■■■□□ 2.35
DUPD1-201ENST00000338487 CUX2O14529 1486 aa29.71■■■□□ 2.35
DUPD1-201ENST00000338487 CADPSQ9ULU8 1353 aa29.7■■■□□ 2.35
DUPD1-201ENST00000338487 THOC2Q8NI27 1593 aaKnown RBP29.65■■■□□ 2.34
DUPD1-201ENST00000338487 PDS5BQ9NTI5 1447 aa29.62■■■□□ 2.33
DUPD1-201ENST00000338487 CFTRP13569 1480 aa29.45■■■□□ 2.31
DUPD1-201ENST00000338487 CCDC88BA6NC98 1476 aa29.43■■■□□ 2.3
DUPD1-201ENST00000338487 FANCD2Q9BXW9 1451 aa29.4■■■□□ 2.3
DUPD1-201ENST00000338487 MRC2Q9UBG0 1479 aa29.39■■■□□ 2.3
DUPD1-201ENST00000338487 CEP164Q9UPV0 1460 aa29.36■■■□□ 2.29
DUPD1-201ENST00000338487 WDR62O43379 1518 aa29.3■■■□□ 2.28
DUPD1-201ENST00000338487 PRDM2Q13029 1718 aa29.26■■■□□ 2.27
DUPD1-201ENST00000338487 DNAJC5Q9H3Z4 198 aa29.25■■■□□ 2.27
DUPD1-201ENST00000338487 URB2Q14146 1524 aaKnown RBP29.17■■■□□ 2.26
DUPD1-201ENST00000338487 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
DUPD1-201ENST00000338487 TOPBP1Q92547 1522 aa28.91■■■□□ 2.22
DUPD1-201ENST00000338487 DNMBPQ6XZF7 1577 aa28.81■■■□□ 2.2
DUPD1-201ENST00000338487 ZNF608Q9ULD9 1512 aaPredicted RBP28.77■■■□□ 2.2
DUPD1-201ENST00000338487 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
DUPD1-201ENST00000338487 IFT140Q96RY7 1462 aa28.73■■■□□ 2.19
DUPD1-201ENST00000338487 POLA1P09884 1462 aaPredicted RBP28.63■■■□□ 2.17
DUPD1-201ENST00000338487 TARBP1Q13395 1621 aaKnown RBP28.62■■■□□ 2.17
DUPD1-201ENST00000338487 RAD54L2Q9Y4B4 1467 aa28.6■■■□□ 2.17
DUPD1-201ENST00000338487 CUX1P39880 1505 aa28.6■■■□□ 2.17
DUPD1-201ENST00000338487 EIF4G3O43432 1585 aaKnown RBP28.59■■■□□ 2.17
DUPD1-201ENST00000338487 AQRO60306 1485 aaKnown RBP eCLIP28.55■■■□□ 2.16
DUPD1-201ENST00000338487 FGD5Q6ZNL6 1462 aa28.54■■■□□ 2.16
DUPD1-201ENST00000338487 SOGA1O94964 1423 aa28.51■■■□□ 2.15
DUPD1-201ENST00000338487 OSCARQ8IYS5 282 aa28.48■■■□□ 2.15
DUPD1-201ENST00000338487 TDRD9Q8NDG6 1382 aaKnown RBP28.45■■■□□ 2.14
DUPD1-201ENST00000338487 CHD1O14646 1710 aa28.35■■■□□ 2.13
DUPD1-201ENST00000338487 WDR97A6NE52 1622 aa28.32■■■□□ 2.12
DUPD1-201ENST00000338487 FBLN2P98095 1184 aa28.29■■■□□ 2.12
DUPD1-201ENST00000338487 TRIM41Q8WV44 630 aa28.29■■■□□ 2.12
DUPD1-201ENST00000338487 SYNJ1O43426 1573 aa28.28■■■□□ 2.12
DUPD1-201ENST00000338487 WRNQ14191 1432 aaPredicted RBP eCLIP28.25■■■□□ 2.11
DUPD1-201ENST00000338487 SNAPC4Q5SXM2 1469 aa28.24■■■□□ 2.11
DUPD1-201ENST00000338487 BIVM-ERCC5R4GMW8 1640 aa28.23■■■□□ 2.11
DUPD1-201ENST00000338487 TOP2BQ02880 1626 aa28.21■■■□□ 2.11
DUPD1-201ENST00000338487 PBRM1Q86U86 1689 aa28.19■■■□□ 2.1
DUPD1-201ENST00000338487 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
DUPD1-201ENST00000338487 GRIN2BQ13224 1484 aa28.16■■■□□ 2.1
DUPD1-201ENST00000338487 GAPVD1Q14C86 1478 aa28.16■■■□□ 2.1
DUPD1-201ENST00000338487 RIMBP3CA6NJZ7 1639 aa28.14■■■□□ 2.1
DUPD1-201ENST00000338487 RIMBP3BA6NNM3 1639 aa28.14■■■□□ 2.1
DUPD1-201ENST00000338487 ABCA5Q8WWZ7 1642 aa28.14■■■□□ 2.1
DUPD1-201ENST00000338487 RIMBP3Q9UFD9 1639 aa28.14■■■□□ 2.1
DUPD1-201ENST00000338487 MAGI1Q96QZ7 1491 aaPredicted RBP28.1■■■□□ 2.09
DUPD1-201ENST00000338487 CHMP7Q8WUX9 453 aaPredicted RBP28.08■■■□□ 2.09
DUPD1-201ENST00000338487 ARHGEF11O15085 1522 aa28.06■■■□□ 2.08
DUPD1-201ENST00000338487 SYNJ2O15056 1496 aa28.02■■■□□ 2.08
DUPD1-201ENST00000338487 CLASP1Q7Z460 1538 aa27.95■■■□□ 2.06
DUPD1-201ENST00000338487 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
DUPD1-201ENST00000338487 CYB5RLQ6IPT4 315 aa27.88■■■□□ 2.05
DUPD1-201ENST00000338487 ARAP1Q96P48 1450 aa27.84■■■□□ 2.05
DUPD1-201ENST00000338487 GRIN2AQ12879 1464 aa27.83■■■□□ 2.05
DUPD1-201ENST00000338487 ERICH3Q5RHP9 1530 aa27.82■■■□□ 2.04
DUPD1-201ENST00000338487 FHAD1B1AJZ9 1412 aa27.78■■■□□ 2.04
DUPD1-201ENST00000338487 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
DUPD1-201ENST00000338487 NUP160Q12769 1436 aa27.7■■■□□ 2.03
DUPD1-201ENST00000338487 ERCC6L2Q5T890 1561 aa27.66■■■□□ 2.02
DUPD1-201ENST00000338487 KIF27Q86VH2 1401 aa27.65■■■□□ 2.02
DUPD1-201ENST00000338487 IGF1RP08069 1367 aa27.62■■■□□ 2.01
DUPD1-201ENST00000338487 SHROOM2Q13796 1616 aa27.56■■■□□ 2
DUPD1-201ENST00000338487 CUL7Q14999 1698 aa27.52■■■□□ 2
DUPD1-201ENST00000338487 RUSC2Q8N2Y8 1516 aa27.5■■□□□ 1.99
DUPD1-201ENST00000338487 JPH4Q96JJ6 628 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms