RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 PELP1Q8IZL8 1130 aaKnown RBP23.33■■□□□ 1.32
AFF3-202ENST00000409236 MYT1Q01538 1121 aa22.5■■□□□ 1.19
AFF3-202ENST00000409236 CCER1Q8TC90 406 aaPredicted RBP22.12■■□□□ 1.13
AFF3-202ENST00000409236 ERICH6Q7L0X2 663 aa22.08■■□□□ 1.13
AFF3-202ENST00000409236 DCAF8L2P0C7V8 631 aa21.73■■□□□ 1.07
AFF3-202ENST00000409236 CENPBP07199 599 aaPredicted RBP21.58■■□□□ 1.05
AFF3-202ENST00000409236 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
AFF3-202ENST00000409236 TTBK1Q5TCY1 1321 aaPredicted RBP21.25■□□□□ 0.99
AFF3-202ENST00000409236 APLP2Q06481 763 aa21.23■□□□□ 0.99
AFF3-202ENST00000409236 NEFLP07196 543 aa21.18■□□□□ 0.98
AFF3-202ENST00000409236 ZEB1P37275 1124 aaPredicted RBP21.06■□□□□ 0.96
AFF3-202ENST00000409236 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
AFF3-202ENST00000409236 DAXXQ9UER7 740 aaPredicted RBP20.98■□□□□ 0.95
AFF3-202ENST00000409236 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.94
AFF3-202ENST00000409236 EHMT2Q96KQ7 1210 aa20.57■□□□□ 0.88
AFF3-202ENST00000409236 PCGF6Q9BYE7 350 aa20.55■□□□□ 0.88
AFF3-202ENST00000409236 RTL5Q5HYW3 569 aaPredicted RBP20.54■□□□□ 0.88
AFF3-202ENST00000409236 ZNF316A6NFI3 1004 aaPredicted RBP20.4■□□□□ 0.86
AFF3-202ENST00000409236 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.83
AFF3-202ENST00000409236 GLIPR1L2Q4G1C9 344 aa20.09■□□□□ 0.81
AFF3-202ENST00000409236 CLSPNQ9HAW4 1339 aa19.93■□□□□ 0.78
AFF3-202ENST00000409236 ATP1B4Q9UN42 357 aaPredicted RBP19.77■□□□□ 0.76
AFF3-202ENST00000409236 ANP32BQ92688 251 aaKnown RBP19.66■□□□□ 0.74
AFF3-202ENST00000409236 RANGAP1P46060 587 aaPredicted RBP19.64■□□□□ 0.73
AFF3-202ENST00000409236 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
AFF3-202ENST00000409236 NISCHQ9Y2I1 1504 aa19.62■□□□□ 0.73
AFF3-202ENST00000409236 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
AFF3-202ENST00000409236 TRIM26Q12899 539 aaPredicted RBP19.61■□□□□ 0.73
AFF3-202ENST00000409236 HRCP23327 699 aa19.61■□□□□ 0.73
AFF3-202ENST00000409236 MYT1LQ9UL68 1186 aa19.59■□□□□ 0.73
AFF3-202ENST00000409236 EIF5BO60841 1220 aaKnown RBP19.57■□□□□ 0.72
AFF3-202ENST00000409236 CDK11AQ9UQ88 783 aaPredicted RBP19.57■□□□□ 0.72
AFF3-202ENST00000409236 ZBTB47Q9UFB7 747 aaPredicted RBP19.55■□□□□ 0.72
AFF3-202ENST00000409236 POLR3GLQ9BT43 218 aa19.52■□□□□ 0.71
AFF3-202ENST00000409236 ANP32AP39687 249 aaKnown RBP19.47■□□□□ 0.71
AFF3-202ENST00000409236 DIEXFQ68CQ4 756 aaKnown RBP19.35■□□□□ 0.69
AFF3-202ENST00000409236 SLC4A1APQ9BWU0 796 aaKnown RBP19.29■□□□□ 0.68
AFF3-202ENST00000409236 TNNT2P45379 298 aaPredicted RBP19.25■□□□□ 0.67
AFF3-202ENST00000409236 CANXP27824 592 aaKnown RBP19.19■□□□□ 0.66
AFF3-202ENST00000409236 NEFMP07197 916 aa19.15■□□□□ 0.66
AFF3-202ENST00000409236 HSP90AA1P07900 732 aaKnown RBP19.15■□□□□ 0.66
AFF3-202ENST00000409236 GTF3C3Q9Y5Q9 886 aa19.15■□□□□ 0.66
AFF3-202ENST00000409236 UPF2Q9HAU5 1272 aaKnown RBP19.09■□□□□ 0.65
AFF3-202ENST00000409236 CNGB1Q14028 1251 aaPredicted RBP19.09■□□□□ 0.65
AFF3-202ENST00000409236 ANP32CO43423 234 aa19.07■□□□□ 0.64
AFF3-202ENST00000409236 BCANQ96GW7 911 aa19.06■□□□□ 0.64
AFF3-202ENST00000409236 ITGAEP38570 1179 aa19.03■□□□□ 0.64
AFF3-202ENST00000409236 CDK11BP21127 795 aaKnown RBP19■□□□□ 0.63
AFF3-202ENST00000409236 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
AFF3-202ENST00000409236 TRIM44Q96DX7 344 aaPredicted RBP18.93■□□□□ 0.62
AFF3-202ENST00000409236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
AFF3-202ENST00000409236 HNRNPUL2Q1KMD3 747 aaKnown RBP18.92■□□□□ 0.62
AFF3-202ENST00000409236 NPM2Q86SE8 214 aaKnown RBP18.88■□□□□ 0.61
AFF3-202ENST00000409236 ANP32EQ9BTT0 268 aa18.85■□□□□ 0.61
AFF3-202ENST00000409236 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
AFF3-202ENST00000409236 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
AFF3-202ENST00000409236 NCLP19338 710 aaKnown RBP18.76■□□□□ 0.59
AFF3-202ENST00000409236 ACIN1Q9UKV3 1341 aaKnown RBP18.76■□□□□ 0.59
AFF3-202ENST00000409236 BCL11AQ9H165 835 aa18.74■□□□□ 0.59
AFF3-202ENST00000409236 NBR1Q14596 966 aa18.71■□□□□ 0.59
AFF3-202ENST00000409236 ERICH6BQ5W0A0 696 aa18.62■□□□□ 0.57
AFF3-202ENST00000409236 GOLGA6L22H0YM25 854 aa18.6■□□□□ 0.57
AFF3-202ENST00000409236 BECN1Q14457 450 aa18.6■□□□□ 0.57
AFF3-202ENST00000409236 DDRGK1Q96HY6 314 aa18.59■□□□□ 0.57
AFF3-202ENST00000409236 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.58■□□□□ 0.57
AFF3-202ENST00000409236 TRIM52Q96A61 297 aa18.58■□□□□ 0.57
AFF3-202ENST00000409236 FAM50AQ14320 339 aaKnown RBP18.58■□□□□ 0.56
AFF3-202ENST00000409236 ARXQ96QS3 562 aa18.58■□□□□ 0.56
AFF3-202ENST00000409236 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
AFF3-202ENST00000409236 ZRSR1Q15695 479 aaKnown RBP18.51■□□□□ 0.55
AFF3-202ENST00000409236 DNTTIP2Q5QJE6 756 aaKnown RBP18.51■□□□□ 0.55
AFF3-202ENST00000409236 PTMAP06454 111 aaKnown RBP18.49■□□□□ 0.55
AFF3-202ENST00000409236 GOLGA6L6A8MZA4 724 aa18.49■□□□□ 0.55
AFF3-202ENST00000409236 ZNF326Q5BKZ1 582 aaKnown RBP18.49■□□□□ 0.55
AFF3-202ENST00000409236 FKBP8Q14318 412 aa18.47■□□□□ 0.55
AFF3-202ENST00000409236 NAP1L5Q96NT1 182 aaPredicted RBP18.47■□□□□ 0.55
AFF3-202ENST00000409236 MYH16Q9H6N6 1097 aa18.45■□□□□ 0.54
AFF3-202ENST00000409236 CCDC136Q96JN2 1154 aa18.44■□□□□ 0.54
AFF3-202ENST00000409236 CHAF1AQ13111 956 aaPredicted RBP18.44■□□□□ 0.54
AFF3-202ENST00000409236 NRDCO43847 1150 aa18.38■□□□□ 0.53
AFF3-202ENST00000409236 L1TD1Q5T7N2 865 aaKnown RBP18.3■□□□□ 0.52
AFF3-202ENST00000409236 CASC1Q6TDU7 716 aa18.28■□□□□ 0.52
AFF3-202ENST00000409236 LOC105371045A0A1W2PR82 267 aa18.26■□□□□ 0.51
AFF3-202ENST00000409236 HNRNPUQ00839 825 aaKnown RBP eCLIP18.26■□□□□ 0.51
AFF3-202ENST00000409236 PPM1GO15355 546 aaPredicted RBP18.25■□□□□ 0.51
AFF3-202ENST00000409236 TNNT3P45378 269 aaPredicted RBP18.19■□□□□ 0.5
AFF3-202ENST00000409236 CALRP27797 417 aaKnown RBP18.19■□□□□ 0.5
AFF3-202ENST00000409236 MSNP26038 577 aaKnown RBP18.18■□□□□ 0.5
AFF3-202ENST00000409236 TONSLQ96HA7 1378 aa18.16■□□□□ 0.5
AFF3-202ENST00000409236 AMER1Q5JTC6 1135 aaPredicted RBP18.12■□□□□ 0.49
AFF3-202ENST00000409236 WDR43Q15061 677 aaKnown RBP eCLIP18.11■□□□□ 0.49
AFF3-202ENST00000409236 USP35Q9P2H5 1018 aa18.11■□□□□ 0.49
AFF3-202ENST00000409236 TMC1Q8TDI8 760 aa18.08■□□□□ 0.48
AFF3-202ENST00000409236 FAM9BQ8IZU0 186 aa18.05■□□□□ 0.48
AFF3-202ENST00000409236 SETQ01105 290 aaPredicted RBP18.04■□□□□ 0.48
AFF3-202ENST00000409236 PTMSP20962 102 aa18.02■□□□□ 0.48
AFF3-202ENST00000409236 KIAA2012Q0VF49 1180 aa18.02■□□□□ 0.48
AFF3-202ENST00000409236 GOLGA6L1Q8N7Z2 621 aa18.01■□□□□ 0.47
AFF3-202ENST00000409236 NOC3LQ8WTT2 800 aaKnown RBP18■□□□□ 0.47
AFF3-202ENST00000409236 RTN4Q9NQC3 1192 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms