RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 NISCHQ9Y2I1 1504 aa32.57■■■□□ 2.8
UBA1-202ENST00000377269 CCDC180Q9P1Z9 1646 aa28.37■■■□□ 2.13
UBA1-202ENST00000377269 ABCC9O60706 1549 aa27.35■■□□□ 1.97
UBA1-202ENST00000377269 ZCCHC6Q5VYS8 1495 aaKnown RBP27.28■■□□□ 1.96
UBA1-202ENST00000377269 DCAF8L2P0C7V8 631 aa27.22■■□□□ 1.95
UBA1-202ENST00000377269 DCAF1Q9Y4B6 1507 aa26.82■■□□□ 1.88
UBA1-202ENST00000377269 MYO15BQ96JP2 1530 aa26.59■■□□□ 1.85
UBA1-202ENST00000377269 SHROOM4Q9ULL8 1493 aa26.58■■□□□ 1.84
UBA1-202ENST00000377269 NACADO15069 1562 aa26.56■■□□□ 1.84
UBA1-202ENST00000377269 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
UBA1-202ENST00000377269 SCRIBQ14160 1630 aa26.23■■□□□ 1.79
UBA1-202ENST00000377269 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
UBA1-202ENST00000377269 PABPN1Q86U42 306 aaKnown RBP eCLIP25.83■■□□□ 1.731e-6■■■□□ 16.5
UBA1-202ENST00000377269 BICRAQ9NZM4 1560 aa25.69■■□□□ 1.7
UBA1-202ENST00000377269 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
UBA1-202ENST00000377269 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
UBA1-202ENST00000377269 RSF1Q96T23 1441 aaPredicted RBP25.22■■□□□ 1.63
UBA1-202ENST00000377269 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
UBA1-202ENST00000377269 BAZ1AQ9NRL2 1556 aaPredicted RBP25.12■■□□□ 1.61
UBA1-202ENST00000377269 SMARCA4P51532 1647 aa25.06■■□□□ 1.6
UBA1-202ENST00000377269 WIZO95785 1651 aa24.95■■□□□ 1.58
UBA1-202ENST00000377269 EIF4G1Q04637 1599 aaKnown RBP24.94■■□□□ 1.58
UBA1-202ENST00000377269 ATAD2BQ9ULI0 1458 aa24.79■■□□□ 1.56
UBA1-202ENST00000377269 PEG3Q9GZU2 1588 aa24.72■■□□□ 1.55
UBA1-202ENST00000377269 SMARCA2P51531 1590 aa24.67■■□□□ 1.54
UBA1-202ENST00000377269 CC2D2AQ9P2K1 1620 aa24.65■■□□□ 1.54
UBA1-202ENST00000377269 TOP2AP11388 1531 aaKnown RBP24.62■■□□□ 1.53
UBA1-202ENST00000377269 BAZ1BQ9UIG0 1483 aaKnown RBP24.61■■□□□ 1.53
UBA1-202ENST00000377269 NCAPD3P42695 1498 aa24.59■■□□□ 1.53
UBA1-202ENST00000377269 DNAJC5BQ9UF47 199 aa24.51■■□□□ 1.51
UBA1-202ENST00000377269 CCDC88BA6NC98 1476 aa24.46■■□□□ 1.51
UBA1-202ENST00000377269 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
UBA1-202ENST00000377269 HRCP23327 699 aa24.36■■□□□ 1.49
UBA1-202ENST00000377269 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
UBA1-202ENST00000377269 CADPSQ9ULU8 1353 aa23.98■■□□□ 1.43
UBA1-202ENST00000377269 CFTRP13569 1480 aa23.98■■□□□ 1.43
UBA1-202ENST00000377269 NESP48681 1621 aa23.93■■□□□ 1.42
UBA1-202ENST00000377269 ABCC8Q09428 1581 aa23.88■■□□□ 1.41
UBA1-202ENST00000377269 TRIM41Q8WV44 630 aa23.85■■□□□ 1.41
UBA1-202ENST00000377269 PELP1Q8IZL8 1130 aaKnown RBP23.78■■□□□ 1.4
UBA1-202ENST00000377269 LAMC3Q9Y6N6 1575 aa23.73■■□□□ 1.39
UBA1-202ENST00000377269 WRNQ14191 1432 aaPredicted RBP eCLIP23.72■■□□□ 1.39
UBA1-202ENST00000377269 FANCD2Q9BXW9 1451 aa23.71■■□□□ 1.39
UBA1-202ENST00000377269 PPARGC1BQ86YN6 1023 aaKnown RBP23.64■■□□□ 1.37
UBA1-202ENST00000377269 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
UBA1-202ENST00000377269 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
UBA1-202ENST00000377269 SYNJ1O43426 1573 aa23.62■■□□□ 1.37
UBA1-202ENST00000377269 PDS5BQ9NTI5 1447 aa23.62■■□□□ 1.37
UBA1-202ENST00000377269 CUX1P39880 1505 aa23.57■■□□□ 1.36
UBA1-202ENST00000377269 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
UBA1-202ENST00000377269 FAM9AQ8IZU1 332 aaPredicted RBP23.51■■□□□ 1.35
UBA1-202ENST00000377269 KIF21AQ7Z4S6 1674 aa23.5■■□□□ 1.35
UBA1-202ENST00000377269 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
UBA1-202ENST00000377269 URB2Q14146 1524 aaKnown RBP23.44■■□□□ 1.34
UBA1-202ENST00000377269 ERCC6Q03468 1493 aa23.42■■□□□ 1.34
UBA1-202ENST00000377269 BIVM-ERCC5R4GMW8 1640 aa23.42■■□□□ 1.34
UBA1-202ENST00000377269 SOGA1O94964 1423 aa23.42■■□□□ 1.34
UBA1-202ENST00000377269 TOPBP1Q92547 1522 aa23.4■■□□□ 1.34
UBA1-202ENST00000377269 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
UBA1-202ENST00000377269 RUSC2Q8N2Y8 1516 aa23.36■■□□□ 1.33
UBA1-202ENST00000377269 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
UBA1-202ENST00000377269 MRC2Q9UBG0 1479 aa23.32■■□□□ 1.32
UBA1-202ENST00000377269 LOC105371045A0A1W2PR82 267 aa23.29■■□□□ 1.32
UBA1-202ENST00000377269 POLA1P09884 1462 aaPredicted RBP23.29■■□□□ 1.32
UBA1-202ENST00000377269 EHMT2Q96KQ7 1210 aa23.28■■□□□ 1.32
UBA1-202ENST00000377269 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.32
UBA1-202ENST00000377269 WDR62O43379 1518 aa23.19■■□□□ 1.3
UBA1-202ENST00000377269 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
UBA1-202ENST00000377269 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
UBA1-202ENST00000377269 CUX2O14529 1486 aa23.17■■□□□ 1.3
UBA1-202ENST00000377269 EEA1Q15075 1411 aa23.12■■□□□ 1.29
UBA1-202ENST00000377269 KIF27Q86VH2 1401 aa23.12■■□□□ 1.29
UBA1-202ENST00000377269 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
UBA1-202ENST00000377269 ABCA10Q8WWZ4 1543 aa23.1■■□□□ 1.29
UBA1-202ENST00000377269 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
UBA1-202ENST00000377269 SCAF1Q9H7N4 1312 aaKnown RBP23.03■■□□□ 1.28
UBA1-202ENST00000377269 IGF1RP08069 1367 aa23.02■■□□□ 1.28
UBA1-202ENST00000377269 TRIM26Q12899 539 aaPredicted RBP23■■□□□ 1.27
UBA1-202ENST00000377269 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
UBA1-202ENST00000377269 AQRO60306 1485 aaKnown RBP eCLIP22.99■■□□□ 1.278e-7■■■■□ 23.3
UBA1-202ENST00000377269 IFT140Q96RY7 1462 aa22.99■■□□□ 1.27
UBA1-202ENST00000377269 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
UBA1-202ENST00000377269 MYT1Q01538 1121 aa22.94■■□□□ 1.26
UBA1-202ENST00000377269 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
UBA1-202ENST00000377269 ZEB1P37275 1124 aaPredicted RBP22.93■■□□□ 1.26
UBA1-202ENST00000377269 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
UBA1-202ENST00000377269 PRXQ9BXM0 1461 aa22.91■■□□□ 1.26
UBA1-202ENST00000377269 ABCA5Q8WWZ7 1642 aa22.9■■□□□ 1.26
UBA1-202ENST00000377269 UBTFP17480 764 aaKnown RBP22.89■■□□□ 1.26
UBA1-202ENST00000377269 CARMIL1Q5VZK9 1371 aa22.87■■□□□ 1.25
UBA1-202ENST00000377269 GOLGA3Q08378 1498 aa22.85■■□□□ 1.25
UBA1-202ENST00000377269 KIF21BO75037 1637 aa22.84■■□□□ 1.25
UBA1-202ENST00000377269 EIF4G3O43432 1585 aaKnown RBP22.79■■□□□ 1.24
UBA1-202ENST00000377269 ERICH3Q5RHP9 1530 aa22.79■■□□□ 1.24
UBA1-202ENST00000377269 GRIN2BQ13224 1484 aa22.78■■□□□ 1.24
UBA1-202ENST00000377269 TNIKQ9UKE5 1360 aa22.75■■□□□ 1.23
UBA1-202ENST00000377269 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
UBA1-202ENST00000377269 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
UBA1-202ENST00000377269 SNAPC4Q5SXM2 1469 aa22.7■■□□□ 1.22
UBA1-202ENST00000377269 CUL7Q14999 1698 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms