Protein–RNA interactions for Protein: O00233

PSMD9, 26S proteasome non-ATPase regulatory subunit 9, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9O00233 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.44□□□□□ -0.26
PSMD9O00233 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
PSMD9O00233 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.44□□□□□ -0.26
PSMD9O00233 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.44□□□□□ -0.26
PSMD9O00233 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.44□□□□□ -0.26
PSMD9O00233 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.44□□□□□ -0.26
PSMD9O00233 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 AC136759.1-202ENST00000530858 2194 ntBASIC13.44□□□□□ -0.26
PSMD9O00233 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
PSMD9O00233 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD9O00233 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.44□□□□□ -0.26
PSMD9O00233 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
PSMD9O00233 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.43□□□□□ -0.26
PSMD9O00233 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 AL360270.3-201ENST00000609118 1348 ntBASIC13.43□□□□□ -0.26
PSMD9O00233 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
PSMD9O00233 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.43□□□□□ -0.26
PSMD9O00233 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.43□□□□□ -0.26
PSMD9O00233 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
PSMD9O00233 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.43□□□□□ -0.26
PSMD9O00233 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
PSMD9O00233 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.43□□□□□ -0.26
PSMD9O00233 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.43□□□□□ -0.26
PSMD9O00233 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.43□□□□□ -0.26
PSMD9O00233 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
PSMD9O00233 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.43□□□□□ -0.26
PSMD9O00233 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.43□□□□□ -0.26
PSMD9O00233 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.43□□□□□ -0.26
PSMD9O00233 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
PSMD9O00233 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.43□□□□□ -0.26
PSMD9O00233 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.43□□□□□ -0.26
PSMD9O00233 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.43□□□□□ -0.26
PSMD9O00233 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
PSMD9O00233 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.43□□□□□ -0.26
PSMD9O00233 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
PSMD9O00233 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.43□□□□□ -0.26
PSMD9O00233 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.43□□□□□ -0.26
PSMD9O00233 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PSMD9O00233 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PSMD9O00233 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.42□□□□□ -0.26
PSMD9O00233 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.42□□□□□ -0.26
PSMD9O00233 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PSMD9O00233 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.42□□□□□ -0.26
PSMD9O00233 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
PSMD9O00233 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.42□□□□□ -0.26
PSMD9O00233 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
PSMD9O00233 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PSMD9O00233 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PSMD9O00233 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PSMD9O00233 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PSMD9O00233 AL137783.1-201ENST00000623494 1896 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms