RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 NISCHQ9Y2I1 1504 aa24.93■■□□□ 1.58
DNMT3B-204ENST00000353855 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
DNMT3B-204ENST00000353855 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
DNMT3B-204ENST00000353855 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
DNMT3B-204ENST00000353855 PCGF6Q9BYE7 350 aa23.33■■□□□ 1.33
DNMT3B-204ENST00000353855 HRCP23327 699 aa22.95■■□□□ 1.26
DNMT3B-204ENST00000353855 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
DNMT3B-204ENST00000353855 PPARGC1BQ86YN6 1023 aaKnown RBP22.79■■□□□ 1.24
DNMT3B-204ENST00000353855 EHMT2Q96KQ7 1210 aa22.72■■□□□ 1.23
DNMT3B-204ENST00000353855 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
DNMT3B-204ENST00000353855 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
DNMT3B-204ENST00000353855 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
DNMT3B-204ENST00000353855 LOC105371045A0A1W2PR82 267 aa22.16■■□□□ 1.14
DNMT3B-204ENST00000353855 CENPBP07199 599 aaPredicted RBP22.15■■□□□ 1.14
DNMT3B-204ENST00000353855 TRIM26Q12899 539 aaPredicted RBP22.12■■□□□ 1.13
DNMT3B-204ENST00000353855 MYT1Q01538 1121 aa22.11■■□□□ 1.13
DNMT3B-204ENST00000353855 TTBK1Q5TCY1 1321 aaPredicted RBP22.09■■□□□ 1.13
DNMT3B-204ENST00000353855 CCER1Q8TC90 406 aaPredicted RBP22■■□□□ 1.11
DNMT3B-204ENST00000353855 YTHDC1Q96MU7 727 aaKnown RBP21.95■■□□□ 1.1
DNMT3B-204ENST00000353855 TRIM41Q8WV44 630 aa21.78■■□□□ 1.08
DNMT3B-204ENST00000353855 GTF3C3Q9Y5Q9 886 aa21.64■■□□□ 1.06
DNMT3B-204ENST00000353855 SCAF1Q9H7N4 1312 aaKnown RBP21.62■■□□□ 1.05
DNMT3B-204ENST00000353855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
DNMT3B-204ENST00000353855 DIEXFQ68CQ4 756 aaKnown RBP21.5■■□□□ 1.03
DNMT3B-204ENST00000353855 ACIN1Q9UKV3 1341 aaKnown RBP21.46■■□□□ 1.03
DNMT3B-204ENST00000353855 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
DNMT3B-204ENST00000353855 NEUROD1Q13562 356 aa21.31■■□□□ 1
DNMT3B-204ENST00000353855 APLP2Q06481 763 aa21.3■■□□□ 1
DNMT3B-204ENST00000353855 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
DNMT3B-204ENST00000353855 ERICH6Q7L0X2 663 aa21.18■□□□□ 0.98
DNMT3B-204ENST00000353855 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
DNMT3B-204ENST00000353855 DCAF1Q9Y4B6 1507 aa21.12■□□□□ 0.97
DNMT3B-204ENST00000353855 HNRNPUL2Q1KMD3 747 aaKnown RBP21.04■□□□□ 0.96
DNMT3B-204ENST00000353855 NEFLP07196 543 aa20.98■□□□□ 0.95
DNMT3B-204ENST00000353855 ZCCHC6Q5VYS8 1495 aaKnown RBP20.89■□□□□ 0.94
DNMT3B-204ENST00000353855 ZNF316A6NFI3 1004 aaPredicted RBP20.88■□□□□ 0.93
DNMT3B-204ENST00000353855 BCANQ96GW7 911 aa20.86■□□□□ 0.93
DNMT3B-204ENST00000353855 ITGAEP38570 1179 aa20.64■□□□□ 0.89
DNMT3B-204ENST00000353855 MIER1Q8N108 512 aa20.61■□□□□ 0.89
DNMT3B-204ENST00000353855 CCDC180Q9P1Z9 1646 aa20.58■□□□□ 0.88
DNMT3B-204ENST00000353855 ATP1B4Q9UN42 357 aaPredicted RBP20.46■□□□□ 0.87
DNMT3B-204ENST00000353855 FKBP8Q14318 412 aa20.35■□□□□ 0.85
DNMT3B-204ENST00000353855 ABCC9O60706 1549 aa20.34■□□□□ 0.85
DNMT3B-204ENST00000353855 ANP32EQ9BTT0 268 aa20.33■□□□□ 0.84
DNMT3B-204ENST00000353855 BCL11AQ9H165 835 aa20.28■□□□□ 0.84
DNMT3B-204ENST00000353855 CNGB1Q14028 1251 aaPredicted RBP20.25■□□□□ 0.83
DNMT3B-204ENST00000353855 CLSPNQ9HAW4 1339 aa20.2■□□□□ 0.82
DNMT3B-204ENST00000353855 CDK11AQ9UQ88 783 aaPredicted RBP20.19■□□□□ 0.82
DNMT3B-204ENST00000353855 SCRIBQ14160 1630 aa20.19■□□□□ 0.82
DNMT3B-204ENST00000353855 RTL5Q5HYW3 569 aaPredicted RBP20.18■□□□□ 0.82
DNMT3B-204ENST00000353855 SUPT16HQ9Y5B9 1047 aaKnown RBP20.16■□□□□ 0.82
DNMT3B-204ENST00000353855 TRIM52Q96A61 297 aa20.08■□□□□ 0.81
DNMT3B-204ENST00000353855 ANP32CO43423 234 aa20.08■□□□□ 0.81
DNMT3B-204ENST00000353855 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.81
DNMT3B-204ENST00000353855 DDX10Q13206 875 aaKnown RBP20.05■□□□□ 0.8
DNMT3B-204ENST00000353855 POLR3GLQ9BT43 218 aa20.04■□□□□ 0.8
DNMT3B-204ENST00000353855 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
DNMT3B-204ENST00000353855 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
DNMT3B-204ENST00000353855 FAM50AQ14320 339 aaKnown RBP19.96■□□□□ 0.79
DNMT3B-204ENST00000353855 IRX6P78412 446 aaPredicted RBP19.96■□□□□ 0.79
DNMT3B-204ENST00000353855 TSHZ2Q9NRE2 1034 aa19.96■□□□□ 0.79
DNMT3B-204ENST00000353855 NBR1Q14596 966 aa19.95■□□□□ 0.78
DNMT3B-204ENST00000353855 DAXXQ9UER7 740 aaPredicted RBP19.91■□□□□ 0.78
DNMT3B-204ENST00000353855 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.77
DNMT3B-204ENST00000353855 HNRNPUQ00839 825 aaKnown RBP eCLIP19.86■□□□□ 0.77
DNMT3B-204ENST00000353855 CEP162Q5TB80 1403 aa19.81■□□□□ 0.76
DNMT3B-204ENST00000353855 RBM19Q9Y4C8 960 aaKnown RBP19.8■□□□□ 0.76
DNMT3B-204ENST00000353855 EIF5BO60841 1220 aaKnown RBP19.77■□□□□ 0.75
DNMT3B-204ENST00000353855 NPM2Q86SE8 214 aaKnown RBP19.76■□□□□ 0.75
DNMT3B-204ENST00000353855 ANP32AP39687 249 aaKnown RBP19.74■□□□□ 0.75
DNMT3B-204ENST00000353855 MYT1LQ9UL68 1186 aa19.67■□□□□ 0.74
DNMT3B-204ENST00000353855 FAM9BQ8IZU0 186 aa19.65■□□□□ 0.74
DNMT3B-204ENST00000353855 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.73
DNMT3B-204ENST00000353855 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.73
DNMT3B-204ENST00000353855 KCNH8Q96L42 1107 aa19.6■□□□□ 0.73
DNMT3B-204ENST00000353855 RTN4Q9NQC3 1192 aaKnown RBP19.6■□□□□ 0.73
DNMT3B-204ENST00000353855 ZBTB47Q9UFB7 747 aaPredicted RBP19.57■□□□□ 0.72
DNMT3B-204ENST00000353855 CLIP1P30622 1438 aa19.56■□□□□ 0.72
DNMT3B-204ENST00000353855 DEKP35659 375 aaKnown RBP19.56■□□□□ 0.72
DNMT3B-204ENST00000353855 TNIKQ9UKE5 1360 aa19.53■□□□□ 0.72
DNMT3B-204ENST00000353855 P3H3Q8IVL6 736 aa19.53■□□□□ 0.72
DNMT3B-204ENST00000353855 CCDC136Q96JN2 1154 aa19.5■□□□□ 0.71
DNMT3B-204ENST00000353855 SENP3-EIF4A1A0A087X0R7 540 aa19.48■□□□□ 0.71
DNMT3B-204ENST00000353855 ZNF326Q5BKZ1 582 aaKnown RBP19.48■□□□□ 0.71
DNMT3B-204ENST00000353855 TONSLQ96HA7 1378 aa19.48■□□□□ 0.71
DNMT3B-204ENST00000353855 NACADO15069 1562 aa19.47■□□□□ 0.71
DNMT3B-204ENST00000353855 SIN3AQ96ST3 1273 aa19.46■□□□□ 0.71
DNMT3B-204ENST00000353855 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
DNMT3B-204ENST00000353855 B4GALNT3Q6L9W6 998 aa19.44■□□□□ 0.7
DNMT3B-204ENST00000353855 SOGA1O94964 1423 aa19.42■□□□□ 0.7
DNMT3B-204ENST00000353855 MRS2Q9HD23 443 aa19.41■□□□□ 0.7
DNMT3B-204ENST00000353855 GOLGA3Q08378 1498 aa19.39■□□□□ 0.69
DNMT3B-204ENST00000353855 NOP58Q9Y2X3 529 aaKnown RBP19.39■□□□□ 0.69
DNMT3B-204ENST00000353855 SALL2Q9Y467 1007 aaPredicted RBP19.38■□□□□ 0.69
DNMT3B-204ENST00000353855 EEA1Q15075 1411 aa19.36■□□□□ 0.69
DNMT3B-204ENST00000353855 PPP4R2Q9NY27 417 aa19.33■□□□□ 0.69
DNMT3B-204ENST00000353855 BAZ1AQ9NRL2 1556 aaPredicted RBP19.32■□□□□ 0.68
DNMT3B-204ENST00000353855 LAS1LQ9Y4W2 734 aaKnown RBP19.32■□□□□ 0.68
DNMT3B-204ENST00000353855 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
DNMT3B-204ENST00000353855 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms