RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 NISCHQ9Y2I1 1504 aa26.88■■□□□ 1.89
PARP1-203ENST00000366794 DCAF8L2P0C7V8 631 aa25.53■■□□□ 1.68
PARP1-203ENST00000366794 SHROOM4Q9ULL8 1493 aa25.06■■□□□ 1.6
PARP1-203ENST00000366794 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
PARP1-203ENST00000366794 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
PARP1-203ENST00000366794 FAM9AQ8IZU1 332 aaPredicted RBP23.37■■□□□ 1.33
PARP1-203ENST00000366794 PCGF6Q9BYE7 350 aa23.21■■□□□ 1.31
PARP1-203ENST00000366794 LOC105371045A0A1W2PR82 267 aa22.96■■□□□ 1.27
PARP1-203ENST00000366794 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
PARP1-203ENST00000366794 TTBK1Q5TCY1 1321 aaPredicted RBP22.95■■□□□ 1.26
PARP1-203ENST00000366794 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
PARP1-203ENST00000366794 PPARGC1BQ86YN6 1023 aaKnown RBP22.76■■□□□ 1.23
PARP1-203ENST00000366794 ABCC9O60706 1549 aa22.59■■□□□ 1.21
PARP1-203ENST00000366794 RANGAP1P46060 587 aaPredicted RBP22.55■■□□□ 1.2
PARP1-203ENST00000366794 ZCCHC6Q5VYS8 1495 aaKnown RBP22.43■■□□□ 1.18
PARP1-203ENST00000366794 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
PARP1-203ENST00000366794 HRCP23327 699 aa22.26■■□□□ 1.15
PARP1-203ENST00000366794 UBTFP17480 764 aaKnown RBP22.15■■□□□ 1.14
PARP1-203ENST00000366794 MYO15BQ96JP2 1530 aa22.13■■□□□ 1.13
PARP1-203ENST00000366794 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
PARP1-203ENST00000366794 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
PARP1-203ENST00000366794 SCRIBQ14160 1630 aa22.01■■□□□ 1.11
PARP1-203ENST00000366794 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
PARP1-203ENST00000366794 APLP2Q06481 763 aa21.91■■□□□ 1.1
PARP1-203ENST00000366794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
PARP1-203ENST00000366794 ATP1B4Q9UN42 357 aaPredicted RBP21.72■■□□□ 1.07
PARP1-203ENST00000366794 HNRNPUL2Q1KMD3 747 aaKnown RBP21.67■■□□□ 1.06
PARP1-203ENST00000366794 ZEB1P37275 1124 aaPredicted RBP21.62■■□□□ 1.05
PARP1-203ENST00000366794 RSF1Q96T23 1441 aaPredicted RBP21.58■■□□□ 1.04
PARP1-203ENST00000366794 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
PARP1-203ENST00000366794 ITGAEP38570 1179 aa21.55■■□□□ 1.04
PARP1-203ENST00000366794 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
PARP1-203ENST00000366794 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
PARP1-203ENST00000366794 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
PARP1-203ENST00000366794 RB1CC1Q8TDY2 1594 aa21.17■□□□□ 0.98
PARP1-203ENST00000366794 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
PARP1-203ENST00000366794 CENPBP07199 599 aaPredicted RBP21.11■□□□□ 0.97
PARP1-203ENST00000366794 DIEXFQ68CQ4 756 aaKnown RBP21.11■□□□□ 0.97
PARP1-203ENST00000366794 P3H3Q8IVL6 736 aa21.07■□□□□ 0.96
PARP1-203ENST00000366794 NACADO15069 1562 aa21.01■□□□□ 0.95
PARP1-203ENST00000366794 FAM50AQ14320 339 aaKnown RBP20.9■□□□□ 0.94
PARP1-203ENST00000366794 WIZO95785 1651 aa20.89■□□□□ 0.93
PARP1-203ENST00000366794 ARID3CA6NKF2 412 aa20.87■□□□□ 0.93
PARP1-203ENST00000366794 SOGA1O94964 1423 aa20.87■□□□□ 0.93
PARP1-203ENST00000366794 CNGB1Q14028 1251 aaPredicted RBP20.86■□□□□ 0.93
PARP1-203ENST00000366794 ABCC8Q09428 1581 aa20.86■□□□□ 0.93
PARP1-203ENST00000366794 NEUROD1Q13562 356 aa20.83■□□□□ 0.93
PARP1-203ENST00000366794 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
PARP1-203ENST00000366794 CEP162Q5TB80 1403 aa20.76■□□□□ 0.91
PARP1-203ENST00000366794 GTF3C3Q9Y5Q9 886 aa20.76■□□□□ 0.91
PARP1-203ENST00000366794 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
PARP1-203ENST00000366794 ZNF316A6NFI3 1004 aaPredicted RBP20.7■□□□□ 0.9
PARP1-203ENST00000366794 WRNQ14191 1432 aaPredicted RBP eCLIP20.67■□□□□ 0.9
PARP1-203ENST00000366794 POLR3GLQ9BT43 218 aa20.62■□□□□ 0.89
PARP1-203ENST00000366794 RUSC2Q8N2Y8 1516 aa20.61■□□□□ 0.89
PARP1-203ENST00000366794 CLIP1P30622 1438 aa20.61■□□□□ 0.89
PARP1-203ENST00000366794 SCAF1Q9H7N4 1312 aaKnown RBP20.59■□□□□ 0.89
PARP1-203ENST00000366794 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
PARP1-203ENST00000366794 ACIN1Q9UKV3 1341 aaKnown RBP20.55■□□□□ 0.88
PARP1-203ENST00000366794 FBLN2P98095 1184 aa20.52■□□□□ 0.88
PARP1-203ENST00000366794 HIRIP3Q9BW71 556 aaPredicted RBP20.52■□□□□ 0.88
PARP1-203ENST00000366794 MIER1Q8N108 512 aa20.49■□□□□ 0.87
PARP1-203ENST00000366794 TNIKQ9UKE5 1360 aa20.48■□□□□ 0.87
PARP1-203ENST00000366794 TRIM52Q96A61 297 aa20.47■□□□□ 0.87
PARP1-203ENST00000366794 BCANQ96GW7 911 aa20.47■□□□□ 0.87
PARP1-203ENST00000366794 GOLGA3Q08378 1498 aa20.46■□□□□ 0.87
PARP1-203ENST00000366794 PELP1Q8IZL8 1130 aaKnown RBP20.45■□□□□ 0.86
PARP1-203ENST00000366794 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
PARP1-203ENST00000366794 CHIC2Q9UKJ5 165 aa20.36■□□□□ 0.85
PARP1-203ENST00000366794 SMARCA4P51532 1647 aa20.33■□□□□ 0.85
PARP1-203ENST00000366794 TOP2AP11388 1531 aaKnown RBP20.33■□□□□ 0.85
PARP1-203ENST00000366794 ZNF326Q5BKZ1 582 aaKnown RBP20.32■□□□□ 0.84
PARP1-203ENST00000366794 DDX10Q13206 875 aaKnown RBP20.3■□□□□ 0.84
PARP1-203ENST00000366794 NEFLP07196 543 aa20.29■□□□□ 0.84
PARP1-203ENST00000366794 EEA1Q15075 1411 aa20.28■□□□□ 0.84
PARP1-203ENST00000366794 CEP164Q9UPV0 1460 aa20.27■□□□□ 0.84
PARP1-203ENST00000366794 ATAD2BQ9ULI0 1458 aa20.25■□□□□ 0.83
PARP1-203ENST00000366794 ZNF777Q9ULD5 760 aaPredicted RBP20.23■□□□□ 0.83
PARP1-203ENST00000366794 SIN3AQ96ST3 1273 aa20.21■□□□□ 0.83
PARP1-203ENST00000366794 RAPGEF2Q9Y4G8 1499 aa20.2■□□□□ 0.82
PARP1-203ENST00000366794 SMARCA2P51531 1590 aa20.2■□□□□ 0.82
PARP1-203ENST00000366794 MYT1LQ9UL68 1186 aa20.18■□□□□ 0.82
PARP1-203ENST00000366794 KIF27Q86VH2 1401 aa20.15■□□□□ 0.82
PARP1-203ENST00000366794 RRP7BPQ9NSQ0 103 aa20.13■□□□□ 0.81
PARP1-203ENST00000366794 CUX2O14529 1486 aa20.11■□□□□ 0.81
PARP1-203ENST00000366794 SENP3-EIF4A1A0A087X0R7 540 aa20.1■□□□□ 0.81
PARP1-203ENST00000366794 VPS8Q8N3P4 1428 aa20.08■□□□□ 0.8
PARP1-203ENST00000366794 ANP32CO43423 234 aa20.05■□□□□ 0.8
PARP1-203ENST00000366794 MTUS2Q5JR59 1369 aa20.03■□□□□ 0.8
PARP1-203ENST00000366794 CARMIL1Q5VZK9 1371 aa20.01■□□□□ 0.79
PARP1-203ENST00000366794 TDRD9Q8NDG6 1382 aaKnown RBP20■□□□□ 0.79
PARP1-203ENST00000366794 TONSLQ96HA7 1378 aa19.97■□□□□ 0.79
PARP1-203ENST00000366794 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
PARP1-203ENST00000366794 CCNB3Q8WWL7 1395 aa19.93■□□□□ 0.78
PARP1-203ENST00000366794 FKBP8Q14318 412 aa19.92■□□□□ 0.78
PARP1-203ENST00000366794 IRX6P78412 446 aaPredicted RBP19.9■□□□□ 0.78
PARP1-203ENST00000366794 ERICH6Q7L0X2 663 aa19.9■□□□□ 0.78
PARP1-203ENST00000366794 SYNJ1O43426 1573 aa19.89■□□□□ 0.77
PARP1-203ENST00000366794 BICRAQ9NZM4 1560 aa19.88■□□□□ 0.77
PARP1-203ENST00000366794 KCNH8Q96L42 1107 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms