RNA–Protein interactions for RNA: ENST00000341832.10

CDK11B-203, Transcript of cyclin dependent kinase 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK11B, Length 2,998 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-203ENST00000341832 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
CDK11B-203ENST00000341832 PELP1Q8IZL8 1130 aaKnown RBP24.56■■□□□ 1.52
CDK11B-203ENST00000341832 CCDC180Q9P1Z9 1646 aa24.42■■□□□ 1.5
CDK11B-203ENST00000341832 ABCC9O60706 1549 aa24.28■■□□□ 1.48
CDK11B-203ENST00000341832 MYT1Q01538 1121 aa24.14■■□□□ 1.45
CDK11B-203ENST00000341832 RB1CC1Q8TDY2 1594 aa23.26■■□□□ 1.31
CDK11B-203ENST00000341832 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
CDK11B-203ENST00000341832 NACADO15069 1562 aa23.1■■□□□ 1.29
CDK11B-203ENST00000341832 HRCP23327 699 aa22.96■■□□□ 1.27
CDK11B-203ENST00000341832 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
CDK11B-203ENST00000341832 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
CDK11B-203ENST00000341832 UNC13AQ9UPW8 1703 aa22.61■■□□□ 1.21
CDK11B-203ENST00000341832 PRKCSHP14314 528 aaPredicted RBP22.54■■□□□ 1.2
CDK11B-203ENST00000341832 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
CDK11B-203ENST00000341832 SCAF1Q9H7N4 1312 aaKnown RBP22.49■■□□□ 1.19
CDK11B-203ENST00000341832 SHROOM4Q9ULL8 1493 aa22.48■■□□□ 1.19
CDK11B-203ENST00000341832 DCAF8L2P0C7V8 631 aa22.48■■□□□ 1.19
CDK11B-203ENST00000341832 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
CDK11B-203ENST00000341832 DCAF1Q9Y4B6 1507 aa22.45■■□□□ 1.18
CDK11B-203ENST00000341832 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
CDK11B-203ENST00000341832 PPARGC1BQ86YN6 1023 aaKnown RBP22.19■■□□□ 1.14
CDK11B-203ENST00000341832 BCL11AQ9H165 835 aa22.14■■□□□ 1.14
CDK11B-203ENST00000341832 ERICH6Q7L0X2 663 aa22.08■■□□□ 1.13
CDK11B-203ENST00000341832 APLP2Q06481 763 aa22.06■■□□□ 1.12
CDK11B-203ENST00000341832 CC2D2AQ9P2K1 1620 aa22.03■■□□□ 1.12
CDK11B-203ENST00000341832 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
CDK11B-203ENST00000341832 EIF4G1Q04637 1599 aaKnown RBP21.98■■□□□ 1.11
CDK11B-203ENST00000341832 SCRIBQ14160 1630 aa21.97■■□□□ 1.11
CDK11B-203ENST00000341832 FAM9AQ8IZU1 332 aaPredicted RBP21.89■■□□□ 1.09
CDK11B-203ENST00000341832 CENPBP07199 599 aaPredicted RBP21.6■■□□□ 1.05
CDK11B-203ENST00000341832 SLC24A1O60721 1099 aa21.55■■□□□ 1.04
CDK11B-203ENST00000341832 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
CDK11B-203ENST00000341832 ACIN1Q9UKV3 1341 aaKnown RBP21.52■■□□□ 1.04
CDK11B-203ENST00000341832 GTF3C3Q9Y5Q9 886 aa21.33■■□□□ 1
CDK11B-203ENST00000341832 NEUROD1Q13562 356 aa21.3■■□□□ 1
CDK11B-203ENST00000341832 NCAPD3P42695 1498 aa21.3■■□□□ 1
CDK11B-203ENST00000341832 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
CDK11B-203ENST00000341832 CUX2O14529 1486 aa21.25■□□□□ 0.99
CDK11B-203ENST00000341832 ANP32EQ9BTT0 268 aa21.17■□□□□ 0.98
CDK11B-203ENST00000341832 ZEB1P37275 1124 aaPredicted RBP21.16■□□□□ 0.98
CDK11B-203ENST00000341832 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
CDK11B-203ENST00000341832 SMARCA2P51531 1590 aa21.15■□□□□ 0.98
CDK11B-203ENST00000341832 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
CDK11B-203ENST00000341832 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
CDK11B-203ENST00000341832 ERCC6Q03468 1493 aa21.04■□□□□ 0.96
CDK11B-203ENST00000341832 PEG3Q9GZU2 1588 aa20.99■□□□□ 0.95
CDK11B-203ENST00000341832 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
CDK11B-203ENST00000341832 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
CDK11B-203ENST00000341832 BAZ1BQ9UIG0 1483 aaKnown RBP20.9■□□□□ 0.94
CDK11B-203ENST00000341832 DAXXQ9UER7 740 aaPredicted RBP20.88■□□□□ 0.93
CDK11B-203ENST00000341832 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
CDK11B-203ENST00000341832 NESP48681 1621 aa20.78■□□□□ 0.92
CDK11B-203ENST00000341832 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
CDK11B-203ENST00000341832 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
CDK11B-203ENST00000341832 EIF5BO60841 1220 aaKnown RBP20.68■□□□□ 0.9
CDK11B-203ENST00000341832 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
CDK11B-203ENST00000341832 SUPT5HO00267 1087 aaKnown RBP20.64■□□□□ 0.89
CDK11B-203ENST00000341832 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
CDK11B-203ENST00000341832 KIF21AQ7Z4S6 1674 aa20.59■□□□□ 0.89
CDK11B-203ENST00000341832 UBE2Q2Q8WVN8 375 aa20.58■□□□□ 0.88
CDK11B-203ENST00000341832 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
CDK11B-203ENST00000341832 ANO8Q9HCE9 1232 aaPredicted RBP20.53■□□□□ 0.88
CDK11B-203ENST00000341832 MRC2Q9UBG0 1479 aa20.52■□□□□ 0.88
CDK11B-203ENST00000341832 WDR62O43379 1518 aa20.5■□□□□ 0.87
CDK11B-203ENST00000341832 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
CDK11B-203ENST00000341832 WIZO95785 1651 aa20.39■□□□□ 0.86
CDK11B-203ENST00000341832 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
CDK11B-203ENST00000341832 TSHZ2Q9NRE2 1034 aa20.34■□□□□ 0.85
CDK11B-203ENST00000341832 CFTRP13569 1480 aa20.33■□□□□ 0.85
CDK11B-203ENST00000341832 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
CDK11B-203ENST00000341832 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
CDK11B-203ENST00000341832 DIEXFQ68CQ4 756 aaKnown RBP20.26■□□□□ 0.83
CDK11B-203ENST00000341832 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
CDK11B-203ENST00000341832 PLEKHG5O94827 1062 aa20.21■□□□□ 0.83
CDK11B-203ENST00000341832 PRDM2Q13029 1718 aa20.17■□□□□ 0.82
CDK11B-203ENST00000341832 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
CDK11B-203ENST00000341832 CLSPNQ9HAW4 1339 aa20.12■□□□□ 0.81
CDK11B-203ENST00000341832 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
CDK11B-203ENST00000341832 SALL2Q9Y467 1007 aaPredicted RBP20.1■□□□□ 0.81
CDK11B-203ENST00000341832 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
CDK11B-203ENST00000341832 ERICH6BQ5W0A0 696 aa20.04■□□□□ 0.8
CDK11B-203ENST00000341832 PKNOX2Q96KN3 472 aa20.04■□□□□ 0.8
CDK11B-203ENST00000341832 IFT140Q96RY7 1462 aa20.03■□□□□ 0.8
CDK11B-203ENST00000341832 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
CDK11B-203ENST00000341832 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
CDK11B-203ENST00000341832 PODXL2Q9NZ53 605 aa19.99■□□□□ 0.79
CDK11B-203ENST00000341832 MYT1LQ9UL68 1186 aa19.97■□□□□ 0.79
CDK11B-203ENST00000341832 CCDC88BA6NC98 1476 aa19.95■□□□□ 0.78
CDK11B-203ENST00000341832 CCDC136Q96JN2 1154 aa19.93■□□□□ 0.78
CDK11B-203ENST00000341832 YTHDC1Q96MU7 727 aaKnown RBP19.91■□□□□ 0.78
CDK11B-203ENST00000341832 TOPBP1Q92547 1522 aa19.91■□□□□ 0.78
CDK11B-203ENST00000341832 DNMBPQ6XZF7 1577 aa19.88■□□□□ 0.77
CDK11B-203ENST00000341832 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
CDK11B-203ENST00000341832 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
CDK11B-203ENST00000341832 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
CDK11B-203ENST00000341832 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
CDK11B-203ENST00000341832 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
CDK11B-203ENST00000341832 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
CDK11B-203ENST00000341832 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
CDK11B-203ENST00000341832 TARBP1Q13395 1621 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms