RNA–Protein interactions for RNA: ENST00000341832.10

CDK11B-203, Transcript of cyclin dependent kinase 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK11B, Length 2,998 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-203ENST00000341832 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
CDK11B-203ENST00000341832 PELP1Q8IZL8 1130 aaKnown RBP24.56■■□□□ 1.52
CDK11B-203ENST00000341832 CCDC180Q9P1Z9 1646 aa24.42■■□□□ 1.5
CDK11B-203ENST00000341832 ABCC9O60706 1549 aa24.28■■□□□ 1.48
CDK11B-203ENST00000341832 MYT1Q01538 1121 aa24.14■■□□□ 1.45
CDK11B-203ENST00000341832 RB1CC1Q8TDY2 1594 aa23.26■■□□□ 1.31
CDK11B-203ENST00000341832 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
CDK11B-203ENST00000341832 NACADO15069 1562 aa23.1■■□□□ 1.29
CDK11B-203ENST00000341832 HRCP23327 699 aa22.96■■□□□ 1.27
CDK11B-203ENST00000341832 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
CDK11B-203ENST00000341832 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
CDK11B-203ENST00000341832 UNC13AQ9UPW8 1703 aa22.61■■□□□ 1.21
CDK11B-203ENST00000341832 PRKCSHP14314 528 aaPredicted RBP22.54■■□□□ 1.2
CDK11B-203ENST00000341832 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
CDK11B-203ENST00000341832 SCAF1Q9H7N4 1312 aaKnown RBP22.49■■□□□ 1.19
CDK11B-203ENST00000341832 SHROOM4Q9ULL8 1493 aa22.48■■□□□ 1.19
CDK11B-203ENST00000341832 DCAF8L2P0C7V8 631 aa22.48■■□□□ 1.19
CDK11B-203ENST00000341832 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
CDK11B-203ENST00000341832 DCAF1Q9Y4B6 1507 aa22.45■■□□□ 1.18
CDK11B-203ENST00000341832 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
CDK11B-203ENST00000341832 PPARGC1BQ86YN6 1023 aaKnown RBP22.19■■□□□ 1.14
CDK11B-203ENST00000341832 BCL11AQ9H165 835 aa22.14■■□□□ 1.14
CDK11B-203ENST00000341832 ERICH6Q7L0X2 663 aa22.08■■□□□ 1.13
CDK11B-203ENST00000341832 APLP2Q06481 763 aa22.06■■□□□ 1.12
CDK11B-203ENST00000341832 CC2D2AQ9P2K1 1620 aa22.03■■□□□ 1.12
CDK11B-203ENST00000341832 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
CDK11B-203ENST00000341832 EIF4G1Q04637 1599 aaKnown RBP21.98■■□□□ 1.11
CDK11B-203ENST00000341832 SCRIBQ14160 1630 aa21.97■■□□□ 1.11
CDK11B-203ENST00000341832 FAM9AQ8IZU1 332 aaPredicted RBP21.89■■□□□ 1.09
CDK11B-203ENST00000341832 CENPBP07199 599 aaPredicted RBP21.6■■□□□ 1.05
CDK11B-203ENST00000341832 SLC24A1O60721 1099 aa21.55■■□□□ 1.04
CDK11B-203ENST00000341832 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
CDK11B-203ENST00000341832 ACIN1Q9UKV3 1341 aaKnown RBP21.52■■□□□ 1.04
CDK11B-203ENST00000341832 GTF3C3Q9Y5Q9 886 aa21.33■■□□□ 1
CDK11B-203ENST00000341832 NEUROD1Q13562 356 aa21.3■■□□□ 1
CDK11B-203ENST00000341832 NCAPD3P42695 1498 aa21.3■■□□□ 1
CDK11B-203ENST00000341832 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
CDK11B-203ENST00000341832 CUX2O14529 1486 aa21.25■□□□□ 0.99
CDK11B-203ENST00000341832 ANP32EQ9BTT0 268 aa21.17■□□□□ 0.98
CDK11B-203ENST00000341832 ZEB1P37275 1124 aaPredicted RBP21.16■□□□□ 0.98
CDK11B-203ENST00000341832 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
CDK11B-203ENST00000341832 SMARCA2P51531 1590 aa21.15■□□□□ 0.98
CDK11B-203ENST00000341832 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
CDK11B-203ENST00000341832 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
CDK11B-203ENST00000341832 ERCC6Q03468 1493 aa21.04■□□□□ 0.96
CDK11B-203ENST00000341832 PEG3Q9GZU2 1588 aa20.99■□□□□ 0.95
CDK11B-203ENST00000341832 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
CDK11B-203ENST00000341832 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
CDK11B-203ENST00000341832 BAZ1BQ9UIG0 1483 aaKnown RBP20.9■□□□□ 0.94
CDK11B-203ENST00000341832 DAXXQ9UER7 740 aaPredicted RBP20.88■□□□□ 0.93
CDK11B-203ENST00000341832 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
CDK11B-203ENST00000341832 NESP48681 1621 aa20.78■□□□□ 0.92
CDK11B-203ENST00000341832 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
CDK11B-203ENST00000341832 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
CDK11B-203ENST00000341832 EIF5BO60841 1220 aaKnown RBP20.68■□□□□ 0.9
CDK11B-203ENST00000341832 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
CDK11B-203ENST00000341832 SUPT5HO00267 1087 aaKnown RBP20.64■□□□□ 0.89
CDK11B-203ENST00000341832 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
CDK11B-203ENST00000341832 KIF21AQ7Z4S6 1674 aa20.59■□□□□ 0.89
CDK11B-203ENST00000341832 UBE2Q2Q8WVN8 375 aa20.58■□□□□ 0.88
CDK11B-203ENST00000341832 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
CDK11B-203ENST00000341832 ANO8Q9HCE9 1232 aaPredicted RBP20.53■□□□□ 0.88
CDK11B-203ENST00000341832 MRC2Q9UBG0 1479 aa20.52■□□□□ 0.88
CDK11B-203ENST00000341832 WDR62O43379 1518 aa20.5■□□□□ 0.87
CDK11B-203ENST00000341832 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
CDK11B-203ENST00000341832 WIZO95785 1651 aa20.39■□□□□ 0.86
CDK11B-203ENST00000341832 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
CDK11B-203ENST00000341832 TSHZ2Q9NRE2 1034 aa20.34■□□□□ 0.85
CDK11B-203ENST00000341832 CFTRP13569 1480 aa20.33■□□□□ 0.85
CDK11B-203ENST00000341832 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
CDK11B-203ENST00000341832 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
CDK11B-203ENST00000341832 DIEXFQ68CQ4 756 aaKnown RBP20.26■□□□□ 0.83
CDK11B-203ENST00000341832 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
CDK11B-203ENST00000341832 PLEKHG5O94827 1062 aa20.21■□□□□ 0.83
CDK11B-203ENST00000341832 PRDM2Q13029 1718 aa20.17■□□□□ 0.82
CDK11B-203ENST00000341832 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
CDK11B-203ENST00000341832 CLSPNQ9HAW4 1339 aa20.12■□□□□ 0.81
CDK11B-203ENST00000341832 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
CDK11B-203ENST00000341832 SALL2Q9Y467 1007 aaPredicted RBP20.1■□□□□ 0.81
CDK11B-203ENST00000341832 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
CDK11B-203ENST00000341832 ERICH6BQ5W0A0 696 aa20.04■□□□□ 0.8
CDK11B-203ENST00000341832 PKNOX2Q96KN3 472 aa20.04■□□□□ 0.8
CDK11B-203ENST00000341832 IFT140Q96RY7 1462 aa20.03■□□□□ 0.8
CDK11B-203ENST00000341832 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
CDK11B-203ENST00000341832 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
CDK11B-203ENST00000341832 PODXL2Q9NZ53 605 aa19.99■□□□□ 0.79
CDK11B-203ENST00000341832 MYT1LQ9UL68 1186 aa19.97■□□□□ 0.79
CDK11B-203ENST00000341832 CCDC88BA6NC98 1476 aa19.95■□□□□ 0.78
CDK11B-203ENST00000341832 CCDC136Q96JN2 1154 aa19.93■□□□□ 0.78
CDK11B-203ENST00000341832 YTHDC1Q96MU7 727 aaKnown RBP19.91■□□□□ 0.78
CDK11B-203ENST00000341832 TOPBP1Q92547 1522 aa19.91■□□□□ 0.78
CDK11B-203ENST00000341832 DNMBPQ6XZF7 1577 aa19.88■□□□□ 0.77
CDK11B-203ENST00000341832 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
CDK11B-203ENST00000341832 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
CDK11B-203ENST00000341832 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
CDK11B-203ENST00000341832 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
CDK11B-203ENST00000341832 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
CDK11B-203ENST00000341832 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
CDK11B-203ENST00000341832 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
CDK11B-203ENST00000341832 TARBP1Q13395 1621 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms