Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCNA2P20248 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.26□□□□□ -0.13
CCNA2P20248 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.26□□□□□ -0.13
CCNA2P20248 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCNA2P20248 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CCNA2P20248 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.25□□□□□ -0.13
CCNA2P20248 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCNA2P20248 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 MTHFR-210ENST00000641407 2387 ntBASIC14.25□□□□□ -0.13
CCNA2P20248 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.25□□□□□ -0.13
CCNA2P20248 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCNA2P20248 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.25□□□□□ -0.13
CCNA2P20248 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.25□□□□□ -0.13
CCNA2P20248 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.25□□□□□ -0.13
CCNA2P20248 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.25□□□□□ -0.13
CCNA2P20248 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.25□□□□□ -0.13
CCNA2P20248 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.25□□□□□ -0.13
CCNA2P20248 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.25□□□□□ -0.13
CCNA2P20248 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.25□□□□□ -0.13
CCNA2P20248 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.25□□□□□ -0.13
CCNA2P20248 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.25□□□□□ -0.13
CCNA2P20248 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CCNA2P20248 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCNA2P20248 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.25□□□□□ -0.13
CCNA2P20248 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.25□□□□□ -0.13
CCNA2P20248 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.25□□□□□ -0.13
CCNA2P20248 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.25□□□□□ -0.13
CCNA2P20248 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.25□□□□□ -0.13
CCNA2P20248 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.25□□□□□ -0.13
CCNA2P20248 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCNA2P20248 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCNA2P20248 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCNA2P20248 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.24□□□□□ -0.13
CCNA2P20248 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CCNA2P20248 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.24□□□□□ -0.13
CCNA2P20248 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CCNA2P20248 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 AC087499.5-201ENST00000452760 1342 ntBASIC14.24□□□□□ -0.13
CCNA2P20248 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CCNA2P20248 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.24□□□□□ -0.13
CCNA2P20248 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.24□□□□□ -0.13
CCNA2P20248 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.24□□□□□ -0.13
CCNA2P20248 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.24□□□□□ -0.13
CCNA2P20248 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.24□□□□□ -0.13
CCNA2P20248 AL844908.2-201ENST00000609461 460 ntBASIC14.24□□□□□ -0.13
CCNA2P20248 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CCNA2P20248 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.24□□□□□ -0.13
CCNA2P20248 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.24□□□□□ -0.13
CCNA2P20248 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CCNA2P20248 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.24□□□□□ -0.13
CCNA2P20248 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.24□□□□□ -0.13
CCNA2P20248 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CCNA2P20248 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.24□□□□□ -0.13
CCNA2P20248 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCNA2P20248 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.24□□□□□ -0.13
CCNA2P20248 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms