RNA–Protein interactions for RNA: ENST00000405342.5

NT5C3A-204, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NT5C3A, Length 1,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-204ENST00000405342 NISCHQ9Y2I1 1504 aa39.67■■■■□ 3.94
NT5C3A-204ENST00000405342 CCDC180Q9P1Z9 1646 aa35.44■■■■□ 3.26
NT5C3A-204ENST00000405342 ABCC9O60706 1549 aa34.9■■■■□ 3.18
NT5C3A-204ENST00000405342 RB1CC1Q8TDY2 1594 aa33.51■■■□□ 2.95
NT5C3A-204ENST00000405342 NACADO15069 1562 aa33.41■■■□□ 2.94
NT5C3A-204ENST00000405342 DCAF8L2P0C7V8 631 aa33.16■■■□□ 2.9
NT5C3A-204ENST00000405342 MYO15BQ96JP2 1530 aa33.16■■■□□ 2.9
NT5C3A-204ENST00000405342 ZCCHC6Q5VYS8 1495 aaKnown RBP32.99■■■□□ 2.87
NT5C3A-204ENST00000405342 DCAF1Q9Y4B6 1507 aa32.87■■■□□ 2.85
NT5C3A-204ENST00000405342 UNC13AQ9UPW8 1703 aa32.64■■■□□ 2.82
NT5C3A-204ENST00000405342 PABPN1Q86U42 306 aaKnown RBP eCLIP32.53■■■□□ 2.8
NT5C3A-204ENST00000405342 BICRAQ9NZM4 1560 aa32.46■■■□□ 2.79
NT5C3A-204ENST00000405342 DNAJC5BQ9UF47 199 aa32.3■■■□□ 2.76
NT5C3A-204ENST00000405342 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
NT5C3A-204ENST00000405342 SCRIBQ14160 1630 aa32.23■■■□□ 2.75
NT5C3A-204ENST00000405342 EIF4G1Q04637 1599 aaKnown RBP31.65■■■□□ 2.66
NT5C3A-204ENST00000405342 CC2D2AQ9P2K1 1620 aa31.58■■■□□ 2.65
NT5C3A-204ENST00000405342 CECR2Q9BXF3 1484 aa31.44■■■□□ 2.62
NT5C3A-204ENST00000405342 SMARCA4P51532 1647 aa30.83■■■□□ 2.53
NT5C3A-204ENST00000405342 NCAPD3P42695 1498 aa30.83■■■□□ 2.53
NT5C3A-204ENST00000405342 BAZ1AQ9NRL2 1556 aaPredicted RBP30.78■■■□□ 2.52
NT5C3A-204ENST00000405342 ATAD2BQ9ULI0 1458 aa30.76■■■□□ 2.51
NT5C3A-204ENST00000405342 SMARCA2P51531 1590 aa30.74■■■□□ 2.51
NT5C3A-204ENST00000405342 HMGXB3Q12766 1538 aa30.65■■■□□ 2.5
NT5C3A-204ENST00000405342 PEG3Q9GZU2 1588 aa30.59■■■□□ 2.49
NT5C3A-204ENST00000405342 MROH2BQ7Z745 1585 aa30.52■■■□□ 2.48
NT5C3A-204ENST00000405342 BAZ1BQ9UIG0 1483 aaKnown RBP30.5■■■□□ 2.47
NT5C3A-204ENST00000405342 ERCC6Q03468 1493 aa30.15■■■□□ 2.42
NT5C3A-204ENST00000405342 WIZO95785 1651 aa30.15■■■□□ 2.42
NT5C3A-204ENST00000405342 NESP48681 1621 aa30.09■■■□□ 2.41
NT5C3A-204ENST00000405342 RSF1Q96T23 1441 aaPredicted RBP30.08■■■□□ 2.41
NT5C3A-204ENST00000405342 LAMC3Q9Y6N6 1575 aa30.06■■■□□ 2.4
NT5C3A-204ENST00000405342 CUX2O14529 1486 aa30.01■■■□□ 2.39
NT5C3A-204ENST00000405342 CADPSQ9ULU8 1353 aa29.89■■■□□ 2.38
NT5C3A-204ENST00000405342 TOP2AP11388 1531 aaKnown RBP29.89■■■□□ 2.38
NT5C3A-204ENST00000405342 PDS5BQ9NTI5 1447 aa29.87■■■□□ 2.37
NT5C3A-204ENST00000405342 THOC2Q8NI27 1593 aaKnown RBP29.76■■■□□ 2.35
NT5C3A-204ENST00000405342 KIF21AQ7Z4S6 1674 aa29.73■■■□□ 2.35
NT5C3A-204ENST00000405342 CFTRP13569 1480 aa29.65■■■□□ 2.34
NT5C3A-204ENST00000405342 MRC2Q9UBG0 1479 aa29.57■■■□□ 2.32
NT5C3A-204ENST00000405342 CEP164Q9UPV0 1460 aa29.54■■■□□ 2.32
NT5C3A-204ENST00000405342 FANCD2Q9BXW9 1451 aa29.53■■■□□ 2.32
NT5C3A-204ENST00000405342 CCDC88BA6NC98 1476 aa29.5■■■□□ 2.31
NT5C3A-204ENST00000405342 WDR62O43379 1518 aa29.49■■■□□ 2.31
NT5C3A-204ENST00000405342 DNAJC5Q9H3Z4 198 aa29.41■■■□□ 2.3
NT5C3A-204ENST00000405342 PRDM2Q13029 1718 aa29.36■■■□□ 2.29
NT5C3A-204ENST00000405342 URB2Q14146 1524 aaKnown RBP29.24■■■□□ 2.27
NT5C3A-204ENST00000405342 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
NT5C3A-204ENST00000405342 TOPBP1Q92547 1522 aa29.02■■■□□ 2.24
NT5C3A-204ENST00000405342 SUPT5HO00267 1087 aaKnown RBP28.99■■■□□ 2.23
NT5C3A-204ENST00000405342 DNMBPQ6XZF7 1577 aa28.98■■■□□ 2.23
NT5C3A-204ENST00000405342 IFT140Q96RY7 1462 aa28.96■■■□□ 2.23
NT5C3A-204ENST00000405342 ZNF608Q9ULD9 1512 aaPredicted RBP28.78■■■□□ 2.2
NT5C3A-204ENST00000405342 POLA1P09884 1462 aaPredicted RBP28.75■■■□□ 2.19
NT5C3A-204ENST00000405342 TARBP1Q13395 1621 aaKnown RBP28.73■■■□□ 2.19
NT5C3A-204ENST00000405342 EIF4G3O43432 1585 aaKnown RBP28.68■■■□□ 2.18
NT5C3A-204ENST00000405342 CUX1P39880 1505 aa28.67■■■□□ 2.18
NT5C3A-204ENST00000405342 OSCARQ8IYS5 282 aa28.65■■■□□ 2.18
NT5C3A-204ENST00000405342 FGD5Q6ZNL6 1462 aa28.63■■■□□ 2.17
NT5C3A-204ENST00000405342 SOGA1O94964 1423 aa28.63■■■□□ 2.17
NT5C3A-204ENST00000405342 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
NT5C3A-204ENST00000405342 AQRO60306 1485 aaKnown RBP eCLIP28.58■■■□□ 2.174e-8■■■■■ 31.9
NT5C3A-204ENST00000405342 WDR97A6NE52 1622 aa28.57■■■□□ 2.16
NT5C3A-204ENST00000405342 TDRD9Q8NDG6 1382 aaKnown RBP28.47■■■□□ 2.15
NT5C3A-204ENST00000405342 WRNQ14191 1432 aaPredicted RBP eCLIP28.38■■■□□ 2.13
NT5C3A-204ENST00000405342 ABCA10Q8WWZ4 1543 aa28.37■■■□□ 2.13
NT5C3A-204ENST00000405342 GRIN2BQ13224 1484 aa28.36■■■□□ 2.13
NT5C3A-204ENST00000405342 TOP2BQ02880 1626 aa28.36■■■□□ 2.13
NT5C3A-204ENST00000405342 BIVM-ERCC5R4GMW8 1640 aa28.35■■■□□ 2.13
NT5C3A-204ENST00000405342 CHD1O14646 1710 aa28.34■■■□□ 2.13
NT5C3A-204ENST00000405342 SNAPC4Q5SXM2 1469 aa28.33■■■□□ 2.13
NT5C3A-204ENST00000405342 MAGI1Q96QZ7 1491 aaPredicted RBP28.33■■■□□ 2.13
NT5C3A-204ENST00000405342 GAPVD1Q14C86 1478 aa28.3■■■□□ 2.12
NT5C3A-204ENST00000405342 SYNJ1O43426 1573 aa28.3■■■□□ 2.12
NT5C3A-204ENST00000405342 FBLN2P98095 1184 aa28.28■■■□□ 2.12
NT5C3A-204ENST00000405342 ABCA5Q8WWZ7 1642 aa28.26■■■□□ 2.12
NT5C3A-204ENST00000405342 TRIM41Q8WV44 630 aa28.24■■■□□ 2.11
NT5C3A-204ENST00000405342 PBRM1Q86U86 1689 aa28.22■■■□□ 2.11
NT5C3A-204ENST00000405342 SYNJ2O15056 1496 aa28.21■■■□□ 2.11
NT5C3A-204ENST00000405342 RIMBP3CA6NJZ7 1639 aa28.2■■■□□ 2.11
NT5C3A-204ENST00000405342 RIMBP3BA6NNM3 1639 aa28.2■■■□□ 2.11
NT5C3A-204ENST00000405342 RIMBP3Q9UFD9 1639 aa28.2■■■□□ 2.11
NT5C3A-204ENST00000405342 CHMP7Q8WUX9 453 aaPredicted RBP28.2■■■□□ 2.11
NT5C3A-204ENST00000405342 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
NT5C3A-204ENST00000405342 CLASP1Q7Z460 1538 aa28.09■■■□□ 2.09
NT5C3A-204ENST00000405342 ERICH3Q5RHP9 1530 aa28.03■■■□□ 2.08
NT5C3A-204ENST00000405342 ADAMTS12P58397 1594 aa28.02■■■□□ 2.08
NT5C3A-204ENST00000405342 GRIN2AQ12879 1464 aa27.98■■■□□ 2.07
NT5C3A-204ENST00000405342 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
NT5C3A-204ENST00000405342 ARAP1Q96P48 1450 aa27.93■■■□□ 2.06
NT5C3A-204ENST00000405342 CYB5RLQ6IPT4 315 aa27.9■■■□□ 2.06
NT5C3A-204ENST00000405342 NUP160Q12769 1436 aa27.89■■■□□ 2.06
NT5C3A-204ENST00000405342 KIF27Q86VH2 1401 aa27.84■■■□□ 2.05
NT5C3A-204ENST00000405342 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
NT5C3A-204ENST00000405342 IGF1RP08069 1367 aa27.74■■■□□ 2.03
NT5C3A-204ENST00000405342 CUL7Q14999 1698 aa27.71■■■□□ 2.03
NT5C3A-204ENST00000405342 SHROOM2Q13796 1616 aa27.7■■■□□ 2.02
NT5C3A-204ENST00000405342 RUSC2Q8N2Y8 1516 aa27.61■■■□□ 2.01
NT5C3A-204ENST00000405342 ERCC6L2Q5T890 1561 aa27.61■■■□□ 2.01
NT5C3A-204ENST00000405342 CARMIL1Q5VZK9 1371 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms