RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 NISCHQ9Y2I1 1504 aa40.41■■■■■ 4.06
HDAC8-202ENST00000373556 CCDC180Q9P1Z9 1646 aa36.23■■■■□ 3.39
HDAC8-202ENST00000373556 ABCC9O60706 1549 aa36.21■■■■□ 3.39
HDAC8-202ENST00000373556 RB1CC1Q8TDY2 1594 aa34.45■■■■□ 3.11
HDAC8-202ENST00000373556 NACADO15069 1562 aa34.21■■■■□ 3.07
HDAC8-202ENST00000373556 DCAF8L2P0C7V8 631 aa34.11■■■■□ 3.05
HDAC8-202ENST00000373556 DNAJC5BQ9UF47 199 aa33.89■■■■□ 3.02
HDAC8-202ENST00000373556 UNC13AQ9UPW8 1703 aa33.76■■■□□ 2.99
HDAC8-202ENST00000373556 MYO15BQ96JP2 1530 aa33.73■■■□□ 2.99
HDAC8-202ENST00000373556 PABPN1Q86U42 306 aaKnown RBP eCLIP33.72■■■□□ 2.99
HDAC8-202ENST00000373556 ZCCHC6Q5VYS8 1495 aaKnown RBP33.5■■■□□ 2.95
HDAC8-202ENST00000373556 BICRAQ9NZM4 1560 aa33.48■■■□□ 2.95
HDAC8-202ENST00000373556 DCAF1Q9Y4B6 1507 aa33.34■■■□□ 2.93
HDAC8-202ENST00000373556 SCRIBQ14160 1630 aa33.08■■■□□ 2.89
HDAC8-202ENST00000373556 SHROOM4Q9ULL8 1493 aa32.95■■■□□ 2.87
HDAC8-202ENST00000373556 CC2D2AQ9P2K1 1620 aa32.7■■■□□ 2.83
HDAC8-202ENST00000373556 EIF4G1Q04637 1599 aaKnown RBP32.64■■■□□ 2.82
HDAC8-202ENST00000373556 CECR2Q9BXF3 1484 aa32.58■■■□□ 2.81
HDAC8-202ENST00000373556 NCAPD3P42695 1498 aa31.57■■■□□ 2.64
HDAC8-202ENST00000373556 SMARCA4P51532 1647 aa31.53■■■□□ 2.64
HDAC8-202ENST00000373556 ATAD2BQ9ULI0 1458 aa31.52■■■□□ 2.64
HDAC8-202ENST00000373556 SMARCA2P51531 1590 aa31.43■■■□□ 2.62
HDAC8-202ENST00000373556 HMGXB3Q12766 1538 aa31.37■■■□□ 2.61
HDAC8-202ENST00000373556 BAZ1AQ9NRL2 1556 aaPredicted RBP31.35■■■□□ 2.61
HDAC8-202ENST00000373556 ERCC6Q03468 1493 aa31.24■■■□□ 2.59
HDAC8-202ENST00000373556 BAZ1BQ9UIG0 1483 aaKnown RBP31.23■■■□□ 2.59
HDAC8-202ENST00000373556 PEG3Q9GZU2 1588 aa31.18■■■□□ 2.58
HDAC8-202ENST00000373556 MROH2BQ7Z745 1585 aa31.17■■■□□ 2.58
HDAC8-202ENST00000373556 NESP48681 1621 aa31.14■■■□□ 2.58
HDAC8-202ENST00000373556 CUX2O14529 1486 aa31.12■■■□□ 2.57
HDAC8-202ENST00000373556 DNAJC5Q9H3Z4 198 aa31.02■■■□□ 2.56
HDAC8-202ENST00000373556 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
HDAC8-202ENST00000373556 WIZO95785 1651 aa30.82■■■□□ 2.52
HDAC8-202ENST00000373556 THOC2Q8NI27 1593 aaKnown RBP30.79■■■□□ 2.52
HDAC8-202ENST00000373556 KIF21AQ7Z4S6 1674 aa30.76■■■□□ 2.51
HDAC8-202ENST00000373556 PDS5BQ9NTI5 1447 aa30.68■■■□□ 2.5
HDAC8-202ENST00000373556 CADPSQ9ULU8 1353 aa30.63■■■□□ 2.49
HDAC8-202ENST00000373556 RSF1Q96T23 1441 aaPredicted RBP30.52■■■□□ 2.48
HDAC8-202ENST00000373556 MRC2Q9UBG0 1479 aa30.44■■■□□ 2.46
HDAC8-202ENST00000373556 TOP2AP11388 1531 aaKnown RBP30.4■■■□□ 2.46
HDAC8-202ENST00000373556 WDR62O43379 1518 aa30.36■■■□□ 2.45
HDAC8-202ENST00000373556 CEP164Q9UPV0 1460 aa30.33■■■□□ 2.45
HDAC8-202ENST00000373556 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
HDAC8-202ENST00000373556 CFTRP13569 1480 aa30.3■■■□□ 2.44
HDAC8-202ENST00000373556 URB2Q14146 1524 aaKnown RBP30.07■■■□□ 2.4
HDAC8-202ENST00000373556 PRDM2Q13029 1718 aa30.06■■■□□ 2.4
HDAC8-202ENST00000373556 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
HDAC8-202ENST00000373556 TRIM41Q8WV44 630 aa29.76■■■□□ 2.35
HDAC8-202ENST00000373556 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
HDAC8-202ENST00000373556 OSCARQ8IYS5 282 aa29.71■■■□□ 2.35
HDAC8-202ENST00000373556 IFT140Q96RY7 1462 aa29.71■■■□□ 2.35
HDAC8-202ENST00000373556 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
HDAC8-202ENST00000373556 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.34
HDAC8-202ENST00000373556 ABCC8Q09428 1581 aa29.63■■■□□ 2.33
HDAC8-202ENST00000373556 EIF4G3O43432 1585 aaKnown RBP29.55■■■□□ 2.32
HDAC8-202ENST00000373556 TARBP1Q13395 1621 aaKnown RBP29.49■■■□□ 2.31
HDAC8-202ENST00000373556 POLA1P09884 1462 aaPredicted RBP29.45■■■□□ 2.31
HDAC8-202ENST00000373556 AQRO60306 1485 aaKnown RBP eCLIP29.43■■■□□ 2.3
HDAC8-202ENST00000373556 RIMBP3CA6NJZ7 1639 aa29.38■■■□□ 2.29
HDAC8-202ENST00000373556 RIMBP3BA6NNM3 1639 aa29.38■■■□□ 2.29
HDAC8-202ENST00000373556 RIMBP3Q9UFD9 1639 aa29.38■■■□□ 2.29
HDAC8-202ENST00000373556 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
HDAC8-202ENST00000373556 CHD1O14646 1710 aa29.34■■■□□ 2.29
HDAC8-202ENST00000373556 SOGA1O94964 1423 aa29.3■■■□□ 2.28
HDAC8-202ENST00000373556 FGD5Q6ZNL6 1462 aa29.29■■■□□ 2.28
HDAC8-202ENST00000373556 ARHGEF11O15085 1522 aa29.27■■■□□ 2.28
HDAC8-202ENST00000373556 CUX1P39880 1505 aa29.27■■■□□ 2.28
HDAC8-202ENST00000373556 SUPT5HO00267 1087 aaKnown RBP29.27■■■□□ 2.28
HDAC8-202ENST00000373556 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.28
HDAC8-202ENST00000373556 FBLN2P98095 1184 aa29.23■■■□□ 2.27
HDAC8-202ENST00000373556 WDR97A6NE52 1622 aa29.14■■■□□ 2.26
HDAC8-202ENST00000373556 SNAPC4Q5SXM2 1469 aa29.14■■■□□ 2.26
HDAC8-202ENST00000373556 CYB5RLQ6IPT4 315 aa29.04■■■□□ 2.24
HDAC8-202ENST00000373556 GRIN2BQ13224 1484 aa29.04■■■□□ 2.24
HDAC8-202ENST00000373556 MAGI1Q96QZ7 1491 aaPredicted RBP29.02■■■□□ 2.24
HDAC8-202ENST00000373556 PBRM1Q86U86 1689 aa28.99■■■□□ 2.23
HDAC8-202ENST00000373556 ARAP1Q96P48 1450 aa28.99■■■□□ 2.23
HDAC8-202ENST00000373556 CHMP7Q8WUX9 453 aaPredicted RBP28.99■■■□□ 2.23
HDAC8-202ENST00000373556 CLASP1Q7Z460 1538 aa28.95■■■□□ 2.23
HDAC8-202ENST00000373556 GAPVD1Q14C86 1478 aa28.95■■■□□ 2.22
HDAC8-202ENST00000373556 SYNJ1O43426 1573 aa28.94■■■□□ 2.22
HDAC8-202ENST00000373556 SYNJ2O15056 1496 aa28.94■■■□□ 2.22
HDAC8-202ENST00000373556 ABCA10Q8WWZ4 1543 aa28.93■■■□□ 2.22
HDAC8-202ENST00000373556 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
HDAC8-202ENST00000373556 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.21
HDAC8-202ENST00000373556 WRNQ14191 1432 aaPredicted RBP eCLIP28.82■■■□□ 2.2
HDAC8-202ENST00000373556 TOP2BQ02880 1626 aa28.82■■■□□ 2.2
HDAC8-202ENST00000373556 TRHP20396 242 aaPredicted RBP28.71■■■□□ 2.19
HDAC8-202ENST00000373556 ADAMTS12P58397 1594 aa28.69■■■□□ 2.18
HDAC8-202ENST00000373556 GRIN2AQ12879 1464 aa28.67■■■□□ 2.18
HDAC8-202ENST00000373556 CEP170Q5SW79 1584 aa28.6■■■□□ 2.17
HDAC8-202ENST00000373556 FHAD1B1AJZ9 1412 aa28.58■■■□□ 2.17
HDAC8-202ENST00000373556 NUP160Q12769 1436 aa28.56■■■□□ 2.16
HDAC8-202ENST00000373556 ERICH3Q5RHP9 1530 aa28.56■■■□□ 2.16
HDAC8-202ENST00000373556 ERCC6L2Q5T890 1561 aa28.55■■■□□ 2.16
HDAC8-202ENST00000373556 SHROOM2Q13796 1616 aa28.45■■■□□ 2.14
HDAC8-202ENST00000373556 PRG4Q92954 1404 aaPredicted RBP28.3■■■□□ 2.12
HDAC8-202ENST00000373556 RUSC2Q8N2Y8 1516 aa28.29■■■□□ 2.12
HDAC8-202ENST00000373556 JPH4Q96JJ6 628 aa28.26■■■□□ 2.11
HDAC8-202ENST00000373556 KIF27Q86VH2 1401 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms