RNA–Protein interactions for RNA: ENST00000309166.7

NRIP3-201, Transcript of nuclear receptor interacting protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NRIP3, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3-201ENST00000309166 NISCHQ9Y2I1 1504 aa24.45■■□□□ 1.5
NRIP3-201ENST00000309166 SUPT5HO00267 1087 aaKnown RBP23.29■■□□□ 1.32
NRIP3-201ENST00000309166 HRCP23327 699 aa23.16■■□□□ 1.3
NRIP3-201ENST00000309166 PCGF6Q9BYE7 350 aa23.15■■□□□ 1.3
NRIP3-201ENST00000309166 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
NRIP3-201ENST00000309166 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
NRIP3-201ENST00000309166 PELP1Q8IZL8 1130 aaKnown RBP22.77■■□□□ 1.24
NRIP3-201ENST00000309166 DCAF8L2P0C7V8 631 aa22.33■■□□□ 1.17
NRIP3-201ENST00000309166 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
NRIP3-201ENST00000309166 LOC105371045A0A1W2PR82 267 aa22.1■■□□□ 1.13
NRIP3-201ENST00000309166 EHMT2Q96KQ7 1210 aa22.02■■□□□ 1.12
NRIP3-201ENST00000309166 TRIM26Q12899 539 aaPredicted RBP22.01■■□□□ 1.11
NRIP3-201ENST00000309166 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
NRIP3-201ENST00000309166 ZEB1P37275 1124 aaPredicted RBP21.97■■□□□ 1.11
NRIP3-201ENST00000309166 MYT1Q01538 1121 aa21.96■■□□□ 1.11
NRIP3-201ENST00000309166 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.09
NRIP3-201ENST00000309166 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
NRIP3-201ENST00000309166 CENPBP07199 599 aaPredicted RBP21.72■■□□□ 1.07
NRIP3-201ENST00000309166 GTF3C3Q9Y5Q9 886 aa21.63■■□□□ 1.05
NRIP3-201ENST00000309166 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
NRIP3-201ENST00000309166 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
NRIP3-201ENST00000309166 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
NRIP3-201ENST00000309166 NEUROD1Q13562 356 aa21.5■■□□□ 1.03
NRIP3-201ENST00000309166 TTBK1Q5TCY1 1321 aaPredicted RBP21.46■■□□□ 1.03
NRIP3-201ENST00000309166 DCAF1Q9Y4B6 1507 aa21.43■■□□□ 1.02
NRIP3-201ENST00000309166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
NRIP3-201ENST00000309166 DIEXFQ68CQ4 756 aaKnown RBP21.34■■□□□ 1.01
NRIP3-201ENST00000309166 TRIM41Q8WV44 630 aa21.32■■□□□ 1
NRIP3-201ENST00000309166 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
NRIP3-201ENST00000309166 ZNF316A6NFI3 1004 aaPredicted RBP20.76■□□□□ 0.91
NRIP3-201ENST00000309166 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
NRIP3-201ENST00000309166 MIER1Q8N108 512 aa20.65■□□□□ 0.9
NRIP3-201ENST00000309166 HNRNPUL2Q1KMD3 747 aaKnown RBP20.6■□□□□ 0.89
NRIP3-201ENST00000309166 BCANQ96GW7 911 aa20.54■□□□□ 0.88
NRIP3-201ENST00000309166 BCL11AQ9H165 835 aa20.53■□□□□ 0.88
NRIP3-201ENST00000309166 UBTFP17480 764 aaKnown RBP20.49■□□□□ 0.87
NRIP3-201ENST00000309166 RANGAP1P46060 587 aaPredicted RBP20.43■□□□□ 0.86
NRIP3-201ENST00000309166 ANP32EQ9BTT0 268 aa20.43■□□□□ 0.86
NRIP3-201ENST00000309166 ERICH6Q7L0X2 663 aa20.42■□□□□ 0.86
NRIP3-201ENST00000309166 APLP2Q06481 763 aa20.4■□□□□ 0.86
NRIP3-201ENST00000309166 NEFLP07196 543 aa20.3■□□□□ 0.84
NRIP3-201ENST00000309166 SUPT16HQ9Y5B9 1047 aaKnown RBP20.28■□□□□ 0.84
NRIP3-201ENST00000309166 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
NRIP3-201ENST00000309166 TSHZ2Q9NRE2 1034 aa20.19■□□□□ 0.82
NRIP3-201ENST00000309166 FKBP8Q14318 412 aa20.13■□□□□ 0.81
NRIP3-201ENST00000309166 CLSPNQ9HAW4 1339 aa20.08■□□□□ 0.8
NRIP3-201ENST00000309166 ITGAEP38570 1179 aa20.03■□□□□ 0.8
NRIP3-201ENST00000309166 RSF1Q96T23 1441 aaPredicted RBP19.96■□□□□ 0.79
NRIP3-201ENST00000309166 RBM19Q9Y4C8 960 aaKnown RBP19.86■□□□□ 0.77
NRIP3-201ENST00000309166 TRIM52Q96A61 297 aa19.83■□□□□ 0.77
NRIP3-201ENST00000309166 CEP162Q5TB80 1403 aa19.82■□□□□ 0.76
NRIP3-201ENST00000309166 CDK11AQ9UQ88 783 aaPredicted RBP19.78■□□□□ 0.76
NRIP3-201ENST00000309166 DDX10Q13206 875 aaKnown RBP19.77■□□□□ 0.76
NRIP3-201ENST00000309166 KCNH8Q96L42 1107 aa19.76■□□□□ 0.75
NRIP3-201ENST00000309166 RB1CC1Q8TDY2 1594 aa19.76■□□□□ 0.75
NRIP3-201ENST00000309166 IRX6P78412 446 aaPredicted RBP19.72■□□□□ 0.75
NRIP3-201ENST00000309166 NBR1Q14596 966 aa19.67■□□□□ 0.74
NRIP3-201ENST00000309166 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
NRIP3-201ENST00000309166 HIRIP3Q9BW71 556 aaPredicted RBP19.64■□□□□ 0.73
NRIP3-201ENST00000309166 ANP32CO43423 234 aa19.63■□□□□ 0.73
NRIP3-201ENST00000309166 RTL5Q5HYW3 569 aaPredicted RBP19.59■□□□□ 0.73
NRIP3-201ENST00000309166 PRKCSHP14314 528 aaPredicted RBP19.58■□□□□ 0.72
NRIP3-201ENST00000309166 ABCC9O60706 1549 aa19.56■□□□□ 0.72
NRIP3-201ENST00000309166 TNIKQ9UKE5 1360 aa19.56■□□□□ 0.72
NRIP3-201ENST00000309166 DEKP35659 375 aaKnown RBP19.54■□□□□ 0.72
NRIP3-201ENST00000309166 ATP1B4Q9UN42 357 aaPredicted RBP19.54■□□□□ 0.72
NRIP3-201ENST00000309166 SOGA1O94964 1423 aa19.5■□□□□ 0.71
NRIP3-201ENST00000309166 HNRNPUQ00839 825 aaKnown RBP eCLIP19.5■□□□□ 0.71
NRIP3-201ENST00000309166 CNGB1Q14028 1251 aaPredicted RBP19.49■□□□□ 0.71
NRIP3-201ENST00000309166 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
NRIP3-201ENST00000309166 RTN4Q9NQC3 1192 aaKnown RBP19.43■□□□□ 0.7
NRIP3-201ENST00000309166 MYT1LQ9UL68 1186 aa19.42■□□□□ 0.7
NRIP3-201ENST00000309166 MSH5O43196 834 aa19.41■□□□□ 0.7
NRIP3-201ENST00000309166 CLIP1P30622 1438 aa19.41■□□□□ 0.7
NRIP3-201ENST00000309166 CECR2Q9BXF3 1484 aa19.41■□□□□ 0.7
NRIP3-201ENST00000309166 CCDC88BA6NC98 1476 aa19.4■□□□□ 0.7
NRIP3-201ENST00000309166 FAM50AQ14320 339 aaKnown RBP19.38■□□□□ 0.69
NRIP3-201ENST00000309166 ABCC8Q09428 1581 aa19.33■□□□□ 0.68
NRIP3-201ENST00000309166 GOLGA3Q08378 1498 aa19.32■□□□□ 0.68
NRIP3-201ENST00000309166 ANO8Q9HCE9 1232 aaPredicted RBP19.32■□□□□ 0.68
NRIP3-201ENST00000309166 EIF5BO60841 1220 aaKnown RBP19.32■□□□□ 0.68
NRIP3-201ENST00000309166 SIN3AQ96ST3 1273 aa19.3■□□□□ 0.68
NRIP3-201ENST00000309166 CCDC136Q96JN2 1154 aa19.3■□□□□ 0.68
NRIP3-201ENST00000309166 DHX57Q6P158 1386 aaKnown RBP19.3■□□□□ 0.68
NRIP3-201ENST00000309166 ANP32AP39687 249 aaKnown RBP19.28■□□□□ 0.68
NRIP3-201ENST00000309166 NPM2Q86SE8 214 aaKnown RBP19.28■□□□□ 0.68
NRIP3-201ENST00000309166 B4GALNT3Q6L9W6 998 aa19.28■□□□□ 0.68
NRIP3-201ENST00000309166 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
NRIP3-201ENST00000309166 NOP58Q9Y2X3 529 aaKnown RBP19.25■□□□□ 0.67
NRIP3-201ENST00000309166 MROH2BQ7Z745 1585 aa19.24■□□□□ 0.67
NRIP3-201ENST00000309166 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.23■□□□□ 0.67
NRIP3-201ENST00000309166 FAM9BQ8IZU0 186 aa19.23■□□□□ 0.67
NRIP3-201ENST00000309166 FANCIQ9NVI1 1328 aa19.22■□□□□ 0.67
NRIP3-201ENST00000309166 ZBTB47Q9UFB7 747 aaPredicted RBP19.22■□□□□ 0.67
NRIP3-201ENST00000309166 POLR3GLQ9BT43 218 aa19.21■□□□□ 0.67
NRIP3-201ENST00000309166 KANK4Q5T7N3 995 aaPredicted RBP19.19■□□□□ 0.66
NRIP3-201ENST00000309166 EEA1Q15075 1411 aa19.18■□□□□ 0.66
NRIP3-201ENST00000309166 PPP4R2Q9NY27 417 aa19.16■□□□□ 0.66
NRIP3-201ENST00000309166 VPS8Q8N3P4 1428 aa19.14■□□□□ 0.66
NRIP3-201ENST00000309166 SENP3-EIF4A1A0A087X0R7 540 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms