RNA–Protein interactions for RNA: ENST00000480918.5

FXR1-214, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-214ENST00000480918 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.12
FXR1-214ENST00000480918 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
FXR1-214ENST00000480918 AEBP2Q6ZN18 517 aaPredicted RBP27.39■■□□□ 1.97
FXR1-214ENST00000480918 PHF23Q9BUL5 403 aaPredicted RBP24.58■■□□□ 1.53
FXR1-214ENST00000480918 SHROOM4Q9ULL8 1493 aa24.27■■□□□ 1.48
FXR1-214ENST00000480918 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
FXR1-214ENST00000480918 SUPT5HO00267 1087 aaKnown RBP24.02■■□□□ 1.43
FXR1-214ENST00000480918 CCDC180Q9P1Z9 1646 aa23.98■■□□□ 1.43
FXR1-214ENST00000480918 HRCP23327 699 aa23.69■■□□□ 1.38
FXR1-214ENST00000480918 MYO15BQ96JP2 1530 aa23.62■■□□□ 1.37
FXR1-214ENST00000480918 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
FXR1-214ENST00000480918 PCGF6Q9BYE7 350 aa23.28■■□□□ 1.32
FXR1-214ENST00000480918 DCAF8L2P0C7V8 631 aa23.16■■□□□ 1.3
FXR1-214ENST00000480918 PPARGC1BQ86YN6 1023 aaKnown RBP22.95■■□□□ 1.26
FXR1-214ENST00000480918 PLPPR3Q6T4P5 718 aa22.9■■□□□ 1.26
FXR1-214ENST00000480918 TRIM26Q12899 539 aaPredicted RBP22.86■■□□□ 1.25
FXR1-214ENST00000480918 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
FXR1-214ENST00000480918 SENP3Q9H4L4 574 aaPredicted RBP22.85■■□□□ 1.25
FXR1-214ENST00000480918 ABCC9O60706 1549 aa22.81■■□□□ 1.24
FXR1-214ENST00000480918 ZEB1P37275 1124 aaPredicted RBP22.65■■□□□ 1.22
FXR1-214ENST00000480918 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
FXR1-214ENST00000480918 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
FXR1-214ENST00000480918 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
FXR1-214ENST00000480918 SCRIBQ14160 1630 aa22.4■■□□□ 1.18
FXR1-214ENST00000480918 PELP1Q8IZL8 1130 aaKnown RBP22.34■■□□□ 1.17
FXR1-214ENST00000480918 FAM9AQ8IZU1 332 aaPredicted RBP22.14■■□□□ 1.14
FXR1-214ENST00000480918 NACADO15069 1562 aa22.04■■□□□ 1.12
FXR1-214ENST00000480918 SCAF1Q9H7N4 1312 aaKnown RBP22.02■■□□□ 1.12
FXR1-214ENST00000480918 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
FXR1-214ENST00000480918 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
FXR1-214ENST00000480918 BAZ1AQ9NRL2 1556 aaPredicted RBP21.89■■□□□ 1.1
FXR1-214ENST00000480918 WIZO95785 1651 aa21.89■■□□□ 1.09
FXR1-214ENST00000480918 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
FXR1-214ENST00000480918 EHMT2Q96KQ7 1210 aa21.85■■□□□ 1.09
FXR1-214ENST00000480918 CCER1Q8TC90 406 aaPredicted RBP21.79■■□□□ 1.08
FXR1-214ENST00000480918 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
FXR1-214ENST00000480918 ACIN1Q9UKV3 1341 aaKnown RBP21.74■■□□□ 1.07
FXR1-214ENST00000480918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
FXR1-214ENST00000480918 ADRA2BP18089 450 aa21.65■■□□□ 1.06
FXR1-214ENST00000480918 TOP2AP11388 1531 aaKnown RBP21.64■■□□□ 1.06
FXR1-214ENST00000480918 CENPBP07199 599 aaPredicted RBP21.63■■□□□ 1.05
FXR1-214ENST00000480918 DIEXFQ68CQ4 756 aaKnown RBP21.61■■□□□ 1.05
FXR1-214ENST00000480918 NEUROD1Q13562 356 aa21.59■■□□□ 1.05
FXR1-214ENST00000480918 CEP162Q5TB80 1403 aa21.58■■□□□ 1.05
FXR1-214ENST00000480918 EEA1Q15075 1411 aa21.56■■□□□ 1.04
FXR1-214ENST00000480918 TNIKQ9UKE5 1360 aa21.56■■□□□ 1.04
FXR1-214ENST00000480918 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
FXR1-214ENST00000480918 ABCC8Q09428 1581 aa21.52■■□□□ 1.04
FXR1-214ENST00000480918 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
FXR1-214ENST00000480918 SMARCA4P51532 1647 aa21.49■■□□□ 1.03
FXR1-214ENST00000480918 GTF3C3Q9Y5Q9 886 aa21.45■■□□□ 1.02
FXR1-214ENST00000480918 MYT1Q01538 1121 aa21.41■■□□□ 1.02
FXR1-214ENST00000480918 SOGA1O94964 1423 aa21.41■■□□□ 1.02
FXR1-214ENST00000480918 PPP6R1Q9UPN7 881 aa21.37■■□□□ 1.01
FXR1-214ENST00000480918 GOLGA3Q08378 1498 aa21.37■■□□□ 1.01
FXR1-214ENST00000480918 ZNF316A6NFI3 1004 aaPredicted RBP21.37■■□□□ 1.01
FXR1-214ENST00000480918 CSRNP3Q8WYN3 585 aa21.37■■□□□ 1.01
FXR1-214ENST00000480918 TTBK1Q5TCY1 1321 aaPredicted RBP21.3■■□□□ 1
FXR1-214ENST00000480918 UBTFP17480 764 aaKnown RBP21.28■■□□□ 1
FXR1-214ENST00000480918 KCNA4P22459 653 aa21.28■■□□□ 1
FXR1-214ENST00000480918 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
FXR1-214ENST00000480918 FOXD1Q16676 465 aa21.22■□□□□ 0.99
FXR1-214ENST00000480918 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
FXR1-214ENST00000480918 KIF21BO75037 1637 aa21.21■□□□□ 0.99
FXR1-214ENST00000480918 UNC13AQ9UPW8 1703 aa21.19■□□□□ 0.98
FXR1-214ENST00000480918 PEG3Q9GZU2 1588 aa21.11■□□□□ 0.97
FXR1-214ENST00000480918 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
FXR1-214ENST00000480918 CLIP1P30622 1438 aa21.09■□□□□ 0.97
FXR1-214ENST00000480918 VPS8Q8N3P4 1428 aa21.09■□□□□ 0.97
FXR1-214ENST00000480918 SYNJ1O43426 1573 aa21.05■□□□□ 0.96
FXR1-214ENST00000480918 MIER1Q8N108 512 aa21.03■□□□□ 0.96
FXR1-214ENST00000480918 YTHDC1Q96MU7 727 aaKnown RBP21.03■□□□□ 0.96
FXR1-214ENST00000480918 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
FXR1-214ENST00000480918 APLP2Q06481 763 aa20.98■□□□□ 0.95
FXR1-214ENST00000480918 CLSPNQ9HAW4 1339 aa20.96■□□□□ 0.95
FXR1-214ENST00000480918 BICRAQ9NZM4 1560 aa20.91■□□□□ 0.94
FXR1-214ENST00000480918 RAPGEF2Q9Y4G8 1499 aa20.89■□□□□ 0.94
FXR1-214ENST00000480918 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
FXR1-214ENST00000480918 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
FXR1-214ENST00000480918 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
FXR1-214ENST00000480918 DHX57Q6P158 1386 aaKnown RBP20.77■□□□□ 0.92
FXR1-214ENST00000480918 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.91
FXR1-214ENST00000480918 BIVM-ERCC5R4GMW8 1640 aa20.74■□□□□ 0.91
FXR1-214ENST00000480918 ARAP1Q96P48 1450 aa20.7■□□□□ 0.9
FXR1-214ENST00000480918 PRXQ9BXM0 1461 aa20.7■□□□□ 0.9
FXR1-214ENST00000480918 RRBP1Q9P2E9 1410 aaKnown RBP20.67■□□□□ 0.9
FXR1-214ENST00000480918 CUX2O14529 1486 aa20.67■□□□□ 0.9
FXR1-214ENST00000480918 RANGAP1P46060 587 aaPredicted RBP20.61■□□□□ 0.89
FXR1-214ENST00000480918 SUPT16HQ9Y5B9 1047 aaKnown RBP20.59■□□□□ 0.89
FXR1-214ENST00000480918 KANK4Q5T7N3 995 aaPredicted RBP20.55■□□□□ 0.88
FXR1-214ENST00000480918 CCNB3Q8WWL7 1395 aa20.53■□□□□ 0.88
FXR1-214ENST00000480918 KIF27Q86VH2 1401 aa20.52■□□□□ 0.87
FXR1-214ENST00000480918 CUX1P39880 1505 aa20.47■□□□□ 0.87
FXR1-214ENST00000480918 ARHGAP35Q9NRY4 1499 aa20.44■□□□□ 0.86
FXR1-214ENST00000480918 HMGXB3Q12766 1538 aa20.44■□□□□ 0.86
FXR1-214ENST00000480918 MAP3K1Q13233 1512 aa20.43■□□□□ 0.86
FXR1-214ENST00000480918 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.85
FXR1-214ENST00000480918 MAPKBP1O60336 1514 aa20.38■□□□□ 0.85
FXR1-214ENST00000480918 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
FXR1-214ENST00000480918 RAB3GAP2Q9H2M9 1393 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms