RNA–Protein interactions for RNA: ENST00000316316.10

MCM9-202, Transcript of minichromosome maintenance 9 homologous recombination repair factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MCM9, Length 5,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM9-202ENST00000316316 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
MCM9-202ENST00000316316 NISCHQ9Y2I1 1504 aa23.42■■□□□ 1.34
MCM9-202ENST00000316316 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
MCM9-202ENST00000316316 SHROOM4Q9ULL8 1493 aa22.88■■□□□ 1.25
MCM9-202ENST00000316316 PCGF6Q9BYE7 350 aa22.52■■□□□ 1.2
MCM9-202ENST00000316316 EHMT2Q96KQ7 1210 aa22.38■■□□□ 1.17
MCM9-202ENST00000316316 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
MCM9-202ENST00000316316 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
MCM9-202ENST00000316316 HRCP23327 699 aa21.85■■□□□ 1.09
MCM9-202ENST00000316316 ZEB1P37275 1124 aaPredicted RBP21.76■■□□□ 1.07
MCM9-202ENST00000316316 TTBK1Q5TCY1 1321 aaPredicted RBP21.72■■□□□ 1.07
MCM9-202ENST00000316316 CENPBP07199 599 aaPredicted RBP21.72■■□□□ 1.07
MCM9-202ENST00000316316 CCER1Q8TC90 406 aaPredicted RBP21.58■■□□□ 1.04
MCM9-202ENST00000316316 PPARGC1BQ86YN6 1023 aaKnown RBP21.57■■□□□ 1.04
MCM9-202ENST00000316316 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
MCM9-202ENST00000316316 APLP2Q06481 763 aa21.42■■□□□ 1.02
MCM9-202ENST00000316316 MYT1Q01538 1121 aa21.42■■□□□ 1.02
MCM9-202ENST00000316316 TRIM26Q12899 539 aaPredicted RBP21.42■■□□□ 1.02
MCM9-202ENST00000316316 YTHDC1Q96MU7 727 aaKnown RBP21.38■■□□□ 1.01
MCM9-202ENST00000316316 LOC105371045A0A1W2PR82 267 aa21.32■■□□□ 1
MCM9-202ENST00000316316 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
MCM9-202ENST00000316316 RANGAP1P46060 587 aaPredicted RBP21.08■□□□□ 0.97
MCM9-202ENST00000316316 ERICH6Q7L0X2 663 aa21.06■□□□□ 0.96
MCM9-202ENST00000316316 UBTFP17480 764 aaKnown RBP20.96■□□□□ 0.95
MCM9-202ENST00000316316 NEFLP07196 543 aa20.83■□□□□ 0.92
MCM9-202ENST00000316316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.83■□□□□ 0.92
MCM9-202ENST00000316316 DIEXFQ68CQ4 756 aaKnown RBP20.79■□□□□ 0.92
MCM9-202ENST00000316316 GTF3C3Q9Y5Q9 886 aa20.73■□□□□ 0.91
MCM9-202ENST00000316316 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
MCM9-202ENST00000316316 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
MCM9-202ENST00000316316 ACIN1Q9UKV3 1341 aaKnown RBP20.5■□□□□ 0.87
MCM9-202ENST00000316316 ITGAEP38570 1179 aa20.42■□□□□ 0.86
MCM9-202ENST00000316316 SCAF1Q9H7N4 1312 aaKnown RBP20.31■□□□□ 0.84
MCM9-202ENST00000316316 BCANQ96GW7 911 aa20.25■□□□□ 0.83
MCM9-202ENST00000316316 ZNF316A6NFI3 1004 aaPredicted RBP20.23■□□□□ 0.83
MCM9-202ENST00000316316 NEUROD1Q13562 356 aa20.2■□□□□ 0.82
MCM9-202ENST00000316316 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
MCM9-202ENST00000316316 CNGB1Q14028 1251 aaPredicted RBP20.07■□□□□ 0.8
MCM9-202ENST00000316316 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.8
MCM9-202ENST00000316316 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
MCM9-202ENST00000316316 DAXXQ9UER7 740 aaPredicted RBP19.94■□□□□ 0.78
MCM9-202ENST00000316316 RTL5Q5HYW3 569 aaPredicted RBP19.93■□□□□ 0.78
MCM9-202ENST00000316316 CDK11AQ9UQ88 783 aaPredicted RBP19.81■□□□□ 0.76
MCM9-202ENST00000316316 FAM50AQ14320 339 aaKnown RBP19.79■□□□□ 0.76
MCM9-202ENST00000316316 ANP32CO43423 234 aa19.78■□□□□ 0.76
MCM9-202ENST00000316316 MIER1Q8N108 512 aa19.74■□□□□ 0.75
MCM9-202ENST00000316316 FKBP8Q14318 412 aa19.73■□□□□ 0.75
MCM9-202ENST00000316316 CSRNP3Q8WYN3 585 aa19.67■□□□□ 0.74
MCM9-202ENST00000316316 CLSPNQ9HAW4 1339 aa19.65■□□□□ 0.74
MCM9-202ENST00000316316 TRIM52Q96A61 297 aa19.54■□□□□ 0.72
MCM9-202ENST00000316316 ZCCHC6Q5VYS8 1495 aaKnown RBP19.53■□□□□ 0.72
MCM9-202ENST00000316316 DDX10Q13206 875 aaKnown RBP19.52■□□□□ 0.72
MCM9-202ENST00000316316 CCDC180Q9P1Z9 1646 aa19.48■□□□□ 0.71
MCM9-202ENST00000316316 ANP32AP39687 249 aaKnown RBP19.42■□□□□ 0.7
MCM9-202ENST00000316316 HNRNPUQ00839 825 aaKnown RBP eCLIP19.41■□□□□ 0.7
MCM9-202ENST00000316316 ANP32EQ9BTT0 268 aa19.39■□□□□ 0.69
MCM9-202ENST00000316316 ZNF326Q5BKZ1 582 aaKnown RBP19.39■□□□□ 0.69
MCM9-202ENST00000316316 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.69
MCM9-202ENST00000316316 NPM2Q86SE8 214 aaKnown RBP19.38■□□□□ 0.69
MCM9-202ENST00000316316 NBR1Q14596 966 aa19.33■□□□□ 0.69
MCM9-202ENST00000316316 ABCC9O60706 1549 aa19.32■□□□□ 0.68
MCM9-202ENST00000316316 IRX6P78412 446 aaPredicted RBP19.31■□□□□ 0.68
MCM9-202ENST00000316316 P3H3Q8IVL6 736 aa19.31■□□□□ 0.68
MCM9-202ENST00000316316 EIF5BO60841 1220 aaKnown RBP19.29■□□□□ 0.68
MCM9-202ENST00000316316 HIRIP3Q9BW71 556 aaPredicted RBP19.27■□□□□ 0.68
MCM9-202ENST00000316316 FAM9BQ8IZU0 186 aa19.26■□□□□ 0.67
MCM9-202ENST00000316316 SUPT16HQ9Y5B9 1047 aaKnown RBP19.23■□□□□ 0.67
MCM9-202ENST00000316316 MYT1LQ9UL68 1186 aa19.22■□□□□ 0.67
MCM9-202ENST00000316316 SLC4A1APQ9BWU0 796 aaKnown RBP19.2■□□□□ 0.66
MCM9-202ENST00000316316 TONSLQ96HA7 1378 aa19.2■□□□□ 0.66
MCM9-202ENST00000316316 SCRIBQ14160 1630 aa19.16■□□□□ 0.66
MCM9-202ENST00000316316 ZBTB47Q9UFB7 747 aaPredicted RBP19.14■□□□□ 0.65
MCM9-202ENST00000316316 CEP162Q5TB80 1403 aa19.13■□□□□ 0.65
MCM9-202ENST00000316316 CCDC136Q96JN2 1154 aa19.13■□□□□ 0.65
MCM9-202ENST00000316316 BCL11AQ9H165 835 aa19.11■□□□□ 0.65
MCM9-202ENST00000316316 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.64
MCM9-202ENST00000316316 CLIP1P30622 1438 aa19.07■□□□□ 0.64
MCM9-202ENST00000316316 SALL2Q9Y467 1007 aaPredicted RBP19.06■□□□□ 0.64
MCM9-202ENST00000316316 ARID3CA6NKF2 412 aa19.06■□□□□ 0.64
MCM9-202ENST00000316316 MRS2Q9HD23 443 aa19.05■□□□□ 0.64
MCM9-202ENST00000316316 CANXP27824 592 aaKnown RBP18.99■□□□□ 0.63
MCM9-202ENST00000316316 TMC1Q8TDI8 760 aa18.92■□□□□ 0.62
MCM9-202ENST00000316316 RBM19Q9Y4C8 960 aaKnown RBP18.92■□□□□ 0.62
MCM9-202ENST00000316316 CHIC2Q9UKJ5 165 aa18.91■□□□□ 0.62
MCM9-202ENST00000316316 TSHZ2Q9NRE2 1034 aa18.91■□□□□ 0.62
MCM9-202ENST00000316316 TNIKQ9UKE5 1360 aa18.91■□□□□ 0.62
MCM9-202ENST00000316316 SENP3-EIF4A1A0A087X0R7 540 aa18.89■□□□□ 0.62
MCM9-202ENST00000316316 GOLGA3Q08378 1498 aa18.87■□□□□ 0.61
MCM9-202ENST00000316316 ARXQ96QS3 562 aa18.86■□□□□ 0.61
MCM9-202ENST00000316316 SIN3AQ96ST3 1273 aa18.85■□□□□ 0.61
MCM9-202ENST00000316316 ZNF777Q9ULD5 760 aaPredicted RBP18.84■□□□□ 0.61
MCM9-202ENST00000316316 RTN4Q9NQC3 1192 aaKnown RBP18.83■□□□□ 0.61
MCM9-202ENST00000316316 EIF4G2P78344 907 aaKnown RBP eCLIP18.82■□□□□ 0.6
MCM9-202ENST00000316316 EEA1Q15075 1411 aa18.81■□□□□ 0.6
MCM9-202ENST00000316316 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
MCM9-202ENST00000316316 B4GALNT3Q6L9W6 998 aa18.79■□□□□ 0.6
MCM9-202ENST00000316316 NOP58Q9Y2X3 529 aaKnown RBP18.76■□□□□ 0.59
MCM9-202ENST00000316316 DEKP35659 375 aaKnown RBP18.75■□□□□ 0.59
MCM9-202ENST00000316316 GLIPR1L2Q4G1C9 344 aa18.75■□□□□ 0.59
MCM9-202ENST00000316316 UPF2Q9HAU5 1272 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms