RNA–Protein interactions for RNA: ENST00000220325.8

EHD4-201, Transcript of EH domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EHD4, Length 6,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EHD4-201ENST00000220325 DCAF8L2P0C7V8 631 aa25.48■■□□□ 1.67
EHD4-201ENST00000220325 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
EHD4-201ENST00000220325 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
EHD4-201ENST00000220325 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
EHD4-201ENST00000220325 TTBK1Q5TCY1 1321 aaPredicted RBP22.79■■□□□ 1.24
EHD4-201ENST00000220325 FAM9AQ8IZU1 332 aaPredicted RBP22.66■■□□□ 1.22
EHD4-201ENST00000220325 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
EHD4-201ENST00000220325 NISCHQ9Y2I1 1504 aa22.49■■□□□ 1.19
EHD4-201ENST00000220325 APLP2Q06481 763 aa22.49■■□□□ 1.19
EHD4-201ENST00000220325 ATP1B4Q9UN42 357 aaPredicted RBP22.23■■□□□ 1.15
EHD4-201ENST00000220325 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
EHD4-201ENST00000220325 PELP1Q8IZL8 1130 aaKnown RBP22.03■■□□□ 1.12
EHD4-201ENST00000220325 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
EHD4-201ENST00000220325 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
EHD4-201ENST00000220325 UBTFP17480 764 aaKnown RBP21.71■■□□□ 1.07
EHD4-201ENST00000220325 CCER1Q8TC90 406 aaPredicted RBP21.66■■□□□ 1.06
EHD4-201ENST00000220325 YTHDC1Q96MU7 727 aaKnown RBP21.51■■□□□ 1.03
EHD4-201ENST00000220325 ERICH6Q7L0X2 663 aa21.49■■□□□ 1.03
EHD4-201ENST00000220325 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
EHD4-201ENST00000220325 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
EHD4-201ENST00000220325 CNGB1Q14028 1251 aaPredicted RBP21.36■■□□□ 1.01
EHD4-201ENST00000220325 ITGAEP38570 1179 aa21.35■■□□□ 1.01
EHD4-201ENST00000220325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
EHD4-201ENST00000220325 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
EHD4-201ENST00000220325 POLR3GLQ9BT43 218 aa21.32■■□□□ 1
EHD4-201ENST00000220325 CENPBP07199 599 aaPredicted RBP21.28■■□□□ 1
EHD4-201ENST00000220325 NEFLP07196 543 aa21.1■□□□□ 0.97
EHD4-201ENST00000220325 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
EHD4-201ENST00000220325 SLC4A1APQ9BWU0 796 aaKnown RBP20.97■□□□□ 0.95
EHD4-201ENST00000220325 LOC105371045A0A1W2PR82 267 aa20.91■□□□□ 0.94
EHD4-201ENST00000220325 MYT1Q01538 1121 aa20.77■□□□□ 0.91
EHD4-201ENST00000220325 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
EHD4-201ENST00000220325 DAXXQ9UER7 740 aaPredicted RBP20.63■□□□□ 0.89
EHD4-201ENST00000220325 TRIM26Q12899 539 aaPredicted RBP20.63■□□□□ 0.89
EHD4-201ENST00000220325 FAM50AQ14320 339 aaKnown RBP20.55■□□□□ 0.88
EHD4-201ENST00000220325 FBLN2P98095 1184 aa20.54■□□□□ 0.88
EHD4-201ENST00000220325 HRCP23327 699 aa20.52■□□□□ 0.87
EHD4-201ENST00000220325 TRIM52Q96A61 297 aa20.48■□□□□ 0.87
EHD4-201ENST00000220325 BCL11AQ9H165 835 aa20.47■□□□□ 0.87
EHD4-201ENST00000220325 ARID3CA6NKF2 412 aa20.45■□□□□ 0.86
EHD4-201ENST00000220325 ZNF326Q5BKZ1 582 aaKnown RBP20.45■□□□□ 0.86
EHD4-201ENST00000220325 NEUROD1Q13562 356 aa20.44■□□□□ 0.86
EHD4-201ENST00000220325 CLSPNQ9HAW4 1339 aa20.41■□□□□ 0.86
EHD4-201ENST00000220325 SLC24A1O60721 1099 aa20.36■□□□□ 0.85
EHD4-201ENST00000220325 ABCC9O60706 1549 aa20.32■□□□□ 0.84
EHD4-201ENST00000220325 PLPPR3Q6T4P5 718 aa20.29■□□□□ 0.84
EHD4-201ENST00000220325 BCANQ96GW7 911 aa20.27■□□□□ 0.84
EHD4-201ENST00000220325 P3H3Q8IVL6 736 aa20.24■□□□□ 0.83
EHD4-201ENST00000220325 ZNF316A6NFI3 1004 aaPredicted RBP20.16■□□□□ 0.82
EHD4-201ENST00000220325 DIEXFQ68CQ4 756 aaKnown RBP20.12■□□□□ 0.81
EHD4-201ENST00000220325 ZNF777Q9ULD5 760 aaPredicted RBP20.06■□□□□ 0.8
EHD4-201ENST00000220325 RTL5Q5HYW3 569 aaPredicted RBP19.94■□□□□ 0.78
EHD4-201ENST00000220325 ZBTB47Q9UFB7 747 aaPredicted RBP19.91■□□□□ 0.78
EHD4-201ENST00000220325 CANXP27824 592 aaKnown RBP19.89■□□□□ 0.77
EHD4-201ENST00000220325 CHGAP10645 457 aaKnown RBP19.88■□□□□ 0.77
EHD4-201ENST00000220325 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
EHD4-201ENST00000220325 ANP32CO43423 234 aa19.84■□□□□ 0.77
EHD4-201ENST00000220325 ESF1Q9H501 851 aaKnown RBP19.78■□□□□ 0.76
EHD4-201ENST00000220325 PLEKHG5O94827 1062 aa19.77■□□□□ 0.76
EHD4-201ENST00000220325 STAG3Q9UJ98 1225 aa19.75■□□□□ 0.75
EHD4-201ENST00000220325 NEFMP07197 916 aa19.74■□□□□ 0.75
EHD4-201ENST00000220325 GTF3C3Q9Y5Q9 886 aa19.71■□□□□ 0.75
EHD4-201ENST00000220325 SALL2Q9Y467 1007 aaPredicted RBP19.7■□□□□ 0.74
EHD4-201ENST00000220325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.64■□□□□ 0.73
EHD4-201ENST00000220325 NPM2Q86SE8 214 aaKnown RBP19.64■□□□□ 0.73
EHD4-201ENST00000220325 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.73
EHD4-201ENST00000220325 A0A0G2JS52 829 aa19.63■□□□□ 0.73
EHD4-201ENST00000220325 CDK11AQ9UQ88 783 aaPredicted RBP19.6■□□□□ 0.73
EHD4-201ENST00000220325 CHIC2Q9UKJ5 165 aa19.59■□□□□ 0.73
EHD4-201ENST00000220325 CSRNP3Q8WYN3 585 aa19.54■□□□□ 0.72
EHD4-201ENST00000220325 NPM1P06748 294 aaKnown RBP eCLIP19.54■□□□□ 0.72
EHD4-201ENST00000220325 ZBTB7CA1YPR0 619 aa19.49■□□□□ 0.71
EHD4-201ENST00000220325 FAM9BQ8IZU0 186 aa19.47■□□□□ 0.71
EHD4-201ENST00000220325 KDM2AQ9Y2K7 1162 aa19.46■□□□□ 0.71
EHD4-201ENST00000220325 SENP3-EIF4A1A0A087X0R7 540 aa19.4■□□□□ 0.7
EHD4-201ENST00000220325 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.7
EHD4-201ENST00000220325 HIRIP3Q9BW71 556 aaPredicted RBP19.39■□□□□ 0.69
EHD4-201ENST00000220325 C14orf37Q86TY3 774 aa19.35■□□□□ 0.69
EHD4-201ENST00000220325 HNRNPUQ00839 825 aaKnown RBP eCLIP19.34■□□□□ 0.69
EHD4-201ENST00000220325 KCNH8Q96L42 1107 aa19.34■□□□□ 0.69
EHD4-201ENST00000220325 HSP90AA1P07900 732 aaKnown RBP19.33■□□□□ 0.69
EHD4-201ENST00000220325 TONSLQ96HA7 1378 aa19.32■□□□□ 0.68
EHD4-201ENST00000220325 FKBP8Q14318 412 aa19.32■□□□□ 0.68
EHD4-201ENST00000220325 ARXQ96QS3 562 aa19.3■□□□□ 0.68
EHD4-201ENST00000220325 ANP32AP39687 249 aaKnown RBP19.27■□□□□ 0.68
EHD4-201ENST00000220325 CHMP7Q8WUX9 453 aaPredicted RBP19.25■□□□□ 0.67
EHD4-201ENST00000220325 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
EHD4-201ENST00000220325 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
EHD4-201ENST00000220325 TMC1Q8TDI8 760 aa19.2■□□□□ 0.66
EHD4-201ENST00000220325 TSPY4P0CV99 314 aa19.18■□□□□ 0.66
EHD4-201ENST00000220325 TSPY10P0CW01 314 aa19.18■□□□□ 0.66
EHD4-201ENST00000220325 RRP7BPQ9NSQ0 103 aa19.17■□□□□ 0.66
EHD4-201ENST00000220325 ARID4BQ4LE39 1312 aaPredicted RBP19.16■□□□□ 0.66
EHD4-201ENST00000220325 RGL3Q3MIN7 710 aa19.16■□□□□ 0.66
EHD4-201ENST00000220325 PPP1R15AO75807 674 aaPredicted RBP19.15■□□□□ 0.66
EHD4-201ENST00000220325 ACIN1Q9UKV3 1341 aaKnown RBP19.13■□□□□ 0.65
EHD4-201ENST00000220325 WDR43Q15061 677 aaKnown RBP eCLIP19.13■□□□□ 0.65
EHD4-201ENST00000220325 HAP1P54257 671 aaPredicted RBP19.09■□□□□ 0.65
EHD4-201ENST00000220325 PPM1GO15355 546 aaPredicted RBP19.08■□□□□ 0.65
EHD4-201ENST00000220325 EIF5BO60841 1220 aaKnown RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms