RNA–Protein interactions for RNA: ENST00000546711.5

FGD6-203, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 5 BASIC

Gene FGD6, Length 4,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-203ENST00000546711 NISCHQ9Y2I1 1504 aa26.25■■□□□ 1.79
FGD6-203ENST00000546711 DCAF8L2P0C7V8 631 aa24.21■■□□□ 1.47
FGD6-203ENST00000546711 SUPT5HO00267 1087 aaKnown RBP24.14■■□□□ 1.46
FGD6-203ENST00000546711 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
FGD6-203ENST00000546711 PCGF6Q9BYE7 350 aa23.04■■□□□ 1.28
FGD6-203ENST00000546711 EHMT2Q96KQ7 1210 aa22.74■■□□□ 1.23
FGD6-203ENST00000546711 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
FGD6-203ENST00000546711 HRCP23327 699 aa22.62■■□□□ 1.21
FGD6-203ENST00000546711 FAM9AQ8IZU1 332 aaPredicted RBP22.53■■□□□ 1.2
FGD6-203ENST00000546711 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
FGD6-203ENST00000546711 LOC105371045A0A1W2PR82 267 aa22.33■■□□□ 1.17
FGD6-203ENST00000546711 PPARGC1BQ86YN6 1023 aaKnown RBP22.24■■□□□ 1.15
FGD6-203ENST00000546711 ZEB1P37275 1124 aaPredicted RBP22.24■■□□□ 1.15
FGD6-203ENST00000546711 TRIM26Q12899 539 aaPredicted RBP22.22■■□□□ 1.15
FGD6-203ENST00000546711 TTBK1Q5TCY1 1321 aaPredicted RBP22.04■■□□□ 1.12
FGD6-203ENST00000546711 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
FGD6-203ENST00000546711 CCER1Q8TC90 406 aaPredicted RBP21.93■■□□□ 1.1
FGD6-203ENST00000546711 MYO15BQ96JP2 1530 aa21.81■■□□□ 1.08
FGD6-203ENST00000546711 PELP1Q8IZL8 1130 aaKnown RBP21.73■■□□□ 1.07
FGD6-203ENST00000546711 APLP2Q06481 763 aa21.72■■□□□ 1.07
FGD6-203ENST00000546711 CENPBP07199 599 aaPredicted RBP21.7■■□□□ 1.07
FGD6-203ENST00000546711 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
FGD6-203ENST00000546711 UBTFP17480 764 aaKnown RBP21.61■■□□□ 1.05
FGD6-203ENST00000546711 DCAF1Q9Y4B6 1507 aa21.61■■□□□ 1.05
FGD6-203ENST00000546711 RANGAP1P46060 587 aaPredicted RBP21.51■■□□□ 1.03
FGD6-203ENST00000546711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.48■■□□□ 1.03
FGD6-203ENST00000546711 YTHDC1Q96MU7 727 aaKnown RBP21.41■■□□□ 1.02
FGD6-203ENST00000546711 DIEXFQ68CQ4 756 aaKnown RBP21.25■□□□□ 0.99
FGD6-203ENST00000546711 SCRIBQ14160 1630 aa21.24■□□□□ 0.99
FGD6-203ENST00000546711 ABCC9O60706 1549 aa21.23■□□□□ 0.99
FGD6-203ENST00000546711 HNRNPUL2Q1KMD3 747 aaKnown RBP21.17■□□□□ 0.98
FGD6-203ENST00000546711 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.96
FGD6-203ENST00000546711 GTF3C3Q9Y5Q9 886 aa21.02■□□□□ 0.96
FGD6-203ENST00000546711 ACIN1Q9UKV3 1341 aaKnown RBP20.98■□□□□ 0.95
FGD6-203ENST00000546711 MYT1Q01538 1121 aa20.96■□□□□ 0.95
FGD6-203ENST00000546711 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
FGD6-203ENST00000546711 ATP1B4Q9UN42 357 aaPredicted RBP20.9■□□□□ 0.94
FGD6-203ENST00000546711 ZNF316A6NFI3 1004 aaPredicted RBP20.87■□□□□ 0.93
FGD6-203ENST00000546711 CSRNP3Q8WYN3 585 aa20.86■□□□□ 0.93
FGD6-203ENST00000546711 ITGAEP38570 1179 aa20.85■□□□□ 0.93
FGD6-203ENST00000546711 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.93
FGD6-203ENST00000546711 NEUROD1Q13562 356 aa20.78■□□□□ 0.92
FGD6-203ENST00000546711 RB1CC1Q8TDY2 1594 aa20.74■□□□□ 0.91
FGD6-203ENST00000546711 NEFLP07196 543 aa20.66■□□□□ 0.9
FGD6-203ENST00000546711 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
FGD6-203ENST00000546711 CEP162Q5TB80 1403 aa20.54■□□□□ 0.88
FGD6-203ENST00000546711 NACADO15069 1562 aa20.5■□□□□ 0.87
FGD6-203ENST00000546711 ERICH6Q7L0X2 663 aa20.47■□□□□ 0.87
FGD6-203ENST00000546711 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
FGD6-203ENST00000546711 MIER1Q8N108 512 aa20.43■□□□□ 0.86
FGD6-203ENST00000546711 FAM50AQ14320 339 aaKnown RBP20.4■□□□□ 0.86
FGD6-203ENST00000546711 TNIKQ9UKE5 1360 aa20.4■□□□□ 0.86
FGD6-203ENST00000546711 EEA1Q15075 1411 aa20.37■□□□□ 0.85
FGD6-203ENST00000546711 GOLGA3Q08378 1498 aa20.35■□□□□ 0.85
FGD6-203ENST00000546711 CLIP1P30622 1438 aa20.35■□□□□ 0.85
FGD6-203ENST00000546711 BAZ1AQ9NRL2 1556 aaPredicted RBP20.34■□□□□ 0.85
FGD6-203ENST00000546711 BCANQ96GW7 911 aa20.31■□□□□ 0.84
FGD6-203ENST00000546711 SOGA1O94964 1423 aa20.31■□□□□ 0.84
FGD6-203ENST00000546711 WIZO95785 1651 aa20.27■□□□□ 0.84
FGD6-203ENST00000546711 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
FGD6-203ENST00000546711 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
FGD6-203ENST00000546711 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
FGD6-203ENST00000546711 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
FGD6-203ENST00000546711 P3H3Q8IVL6 736 aa20.15■□□□□ 0.82
FGD6-203ENST00000546711 ANP32CO43423 234 aa20.14■□□□□ 0.81
FGD6-203ENST00000546711 CLSPNQ9HAW4 1339 aa20.13■□□□□ 0.81
FGD6-203ENST00000546711 POLR3GLQ9BT43 218 aa20.06■□□□□ 0.8
FGD6-203ENST00000546711 DDX10Q13206 875 aaKnown RBP20.05■□□□□ 0.8
FGD6-203ENST00000546711 CNGB1Q14028 1251 aaPredicted RBP20.05■□□□□ 0.8
FGD6-203ENST00000546711 TOP2AP11388 1531 aaKnown RBP20.02■□□□□ 0.8
FGD6-203ENST00000546711 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
FGD6-203ENST00000546711 FKBP8Q14318 412 aa20.01■□□□□ 0.79
FGD6-203ENST00000546711 BAZ1BQ9UIG0 1483 aaKnown RBP19.96■□□□□ 0.79
FGD6-203ENST00000546711 VPS8Q8N3P4 1428 aa19.95■□□□□ 0.78
FGD6-203ENST00000546711 RUSC2Q8N2Y8 1516 aa19.94■□□□□ 0.78
FGD6-203ENST00000546711 HIRIP3Q9BW71 556 aaPredicted RBP19.87■□□□□ 0.77
FGD6-203ENST00000546711 TONSLQ96HA7 1378 aa19.86■□□□□ 0.77
FGD6-203ENST00000546711 CDK11AQ9UQ88 783 aaPredicted RBP19.85■□□□□ 0.77
FGD6-203ENST00000546711 SMARCA4P51532 1647 aa19.83■□□□□ 0.76
FGD6-203ENST00000546711 SUPT16HQ9Y5B9 1047 aaKnown RBP19.82■□□□□ 0.76
FGD6-203ENST00000546711 KIF27Q86VH2 1401 aa19.81■□□□□ 0.76
FGD6-203ENST00000546711 KANK4Q5T7N3 995 aaPredicted RBP19.81■□□□□ 0.76
FGD6-203ENST00000546711 SMARCA2P51531 1590 aa19.76■□□□□ 0.75
FGD6-203ENST00000546711 HNRNPUQ00839 825 aaKnown RBP eCLIP19.76■□□□□ 0.75
FGD6-203ENST00000546711 CCNB3Q8WWL7 1395 aa19.76■□□□□ 0.75
FGD6-203ENST00000546711 ARID3CA6NKF2 412 aa19.74■□□□□ 0.75
FGD6-203ENST00000546711 RAPGEF2Q9Y4G8 1499 aa19.73■□□□□ 0.75
FGD6-203ENST00000546711 SIN3AQ96ST3 1273 aa19.73■□□□□ 0.75
FGD6-203ENST00000546711 ZNF326Q5BKZ1 582 aaKnown RBP19.71■□□□□ 0.75
FGD6-203ENST00000546711 CHIC2Q9UKJ5 165 aa19.65■□□□□ 0.74
FGD6-203ENST00000546711 MTUS2Q5JR59 1369 aa19.64■□□□□ 0.73
FGD6-203ENST00000546711 DHX57Q6P158 1386 aaKnown RBP19.62■□□□□ 0.73
FGD6-203ENST00000546711 IRX6P78412 446 aaPredicted RBP19.61■□□□□ 0.73
FGD6-203ENST00000546711 FAM9BQ8IZU0 186 aa19.61■□□□□ 0.73
FGD6-203ENST00000546711 ANP32EQ9BTT0 268 aa19.57■□□□□ 0.72
FGD6-203ENST00000546711 RTL5Q5HYW3 569 aaPredicted RBP19.57■□□□□ 0.72
FGD6-203ENST00000546711 RAB3GAP2Q9H2M9 1393 aa19.56■□□□□ 0.72
FGD6-203ENST00000546711 SETD5Q9C0A6 1442 aa19.54■□□□□ 0.72
FGD6-203ENST00000546711 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
FGD6-203ENST00000546711 CUX2O14529 1486 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms