Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.67■□□□□ 0.42
NFKBIEO00221 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.67■□□□□ 0.42
NFKBIEO00221 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC17.67■□□□□ 0.42
NFKBIEO00221 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NFKBIEO00221 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.67■□□□□ 0.42
NFKBIEO00221 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NFKBIEO00221 MIR6816-201ENST00000620368 66 ntBASIC17.67■□□□□ 0.42
NFKBIEO00221 ST5-261ENST00000626808 1071 ntTSL 5 BASIC17.67■□□□□ 0.42
NFKBIEO00221 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NFKBIEO00221 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.67■□□□□ 0.42
NFKBIEO00221 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NFKBIEO00221 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.67■□□□□ 0.42
NFKBIEO00221 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.67■□□□□ 0.42
NFKBIEO00221 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
NFKBIEO00221 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.67■□□□□ 0.42
NFKBIEO00221 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.67■□□□□ 0.42
NFKBIEO00221 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NFKBIEO00221 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NFKBIEO00221 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.67■□□□□ 0.42
NFKBIEO00221 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NFKBIEO00221 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKBIEO00221 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 PRAL-201ENST00000624952 3286 ntBASIC17.66■□□□□ 0.42
NFKBIEO00221 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKBIEO00221 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.66■□□□□ 0.42
NFKBIEO00221 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKBIEO00221 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKBIEO00221 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKBIEO00221 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKBIEO00221 MIR1301-201ENST00000408518 82 ntBASIC17.66■□□□□ 0.42
NFKBIEO00221 OR51A9P-201ENST00000422578 911 ntBASIC17.66■□□□□ 0.42
NFKBIEO00221 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKBIEO00221 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.66■□□□□ 0.42
NFKBIEO00221 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKBIEO00221 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.66■□□□□ 0.42
NFKBIEO00221 TRMT112P3-201ENST00000580149 358 ntBASIC17.66■□□□□ 0.42
NFKBIEO00221 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKBIEO00221 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NFKBIEO00221 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.66■□□□□ 0.42
NFKBIEO00221 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
NFKBIEO00221 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 SSR4P1-203ENST00000599569 2260 ntBASIC17.66■□□□□ 0.42
NFKBIEO00221 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKBIEO00221 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.66■□□□□ 0.42
NFKBIEO00221 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
NFKBIEO00221 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NFKBIEO00221 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKBIEO00221 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.65■□□□□ 0.42
NFKBIEO00221 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.65■□□□□ 0.42
NFKBIEO00221 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKBIEO00221 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.65■□□□□ 0.42
NFKBIEO00221 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKBIEO00221 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKBIEO00221 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKBIEO00221 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
NFKBIEO00221 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC17.65■□□□□ 0.42
NFKBIEO00221 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.65■□□□□ 0.42
NFKBIEO00221 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NFKBIEO00221 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.65■□□□□ 0.42
NFKBIEO00221 RN7SL564P-201ENST00000496309 250 ntBASIC17.65■□□□□ 0.42
NFKBIEO00221 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.65■□□□□ 0.42
NFKBIEO00221 IGHV1-12-201ENST00000518307 205 ntBASIC17.65■□□□□ 0.42
NFKBIEO00221 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.65■□□□□ 0.42
NFKBIEO00221 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC17.65■□□□□ 0.42
NFKBIEO00221 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NFKBIEO00221 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.65■□□□□ 0.42
NFKBIEO00221 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.65■□□□□ 0.42
NFKBIEO00221 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NFKBIEO00221 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NFKBIEO00221 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.65■□□□□ 0.42
NFKBIEO00221 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.65■□□□□ 0.42
NFKBIEO00221 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKBIEO00221 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NFKBIEO00221 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.65■□□□□ 0.42
NFKBIEO00221 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.65■□□□□ 0.42
NFKBIEO00221 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKBIEO00221 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NFKBIEO00221 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NFKBIEO00221 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKBIEO00221 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
NFKBIEO00221 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
NFKBIEO00221 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NFKBIEO00221 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NFKBIEO00221 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NFKBIEO00221 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NFKBIEO00221 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NFKBIEO00221 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms