RNA–Protein interactions for RNA: ENST00000580155.5

RBFOX3-203, Transcript of RNA binding fox-1 homolog 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RBFOX3, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-203ENST00000580155 NISCHQ9Y2I1 1504 aa33.48■■■□□ 2.95
RBFOX3-203ENST00000580155 CCDC180Q9P1Z9 1646 aa29.93■■■□□ 2.38
RBFOX3-203ENST00000580155 ABCC9O60706 1549 aa29.67■■■□□ 2.34
RBFOX3-203ENST00000580155 RB1CC1Q8TDY2 1594 aa28.32■■■□□ 2.12
RBFOX3-203ENST00000580155 NACADO15069 1562 aa28.17■■■□□ 2.1
RBFOX3-203ENST00000580155 DCAF8L2P0C7V8 631 aa28.09■■■□□ 2.09
RBFOX3-203ENST00000580155 ZCCHC6Q5VYS8 1495 aaKnown RBP27.84■■■□□ 2.05
RBFOX3-203ENST00000580155 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
RBFOX3-203ENST00000580155 UNC13AQ9UPW8 1703 aa27.81■■■□□ 2.04
RBFOX3-203ENST00000580155 PABPN1Q86U42 306 aaKnown RBP eCLIP27.64■■■□□ 2.02
RBFOX3-203ENST00000580155 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
RBFOX3-203ENST00000580155 BICRAQ9NZM4 1560 aa27.55■■■□□ 2
RBFOX3-203ENST00000580155 DNAJC5BQ9UF47 199 aa27.53■■■□□ 2
RBFOX3-203ENST00000580155 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
RBFOX3-203ENST00000580155 SHROOM4Q9ULL8 1493 aa27.08■■□□□ 1.93
RBFOX3-203ENST00000580155 EIF4G1Q04637 1599 aaKnown RBP26.82■■□□□ 1.88
RBFOX3-203ENST00000580155 CC2D2AQ9P2K1 1620 aa26.82■■□□□ 1.88
RBFOX3-203ENST00000580155 CECR2Q9BXF3 1484 aa26.65■■□□□ 1.86
RBFOX3-203ENST00000580155 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
RBFOX3-203ENST00000580155 ATAD2BQ9ULI0 1458 aa25.99■■□□□ 1.75
RBFOX3-203ENST00000580155 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
RBFOX3-203ENST00000580155 BAZ1AQ9NRL2 1556 aaPredicted RBP25.96■■□□□ 1.75
RBFOX3-203ENST00000580155 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
RBFOX3-203ENST00000580155 HMGXB3Q12766 1538 aa25.87■■□□□ 1.73
RBFOX3-203ENST00000580155 MROH2BQ7Z745 1585 aa25.85■■□□□ 1.73
RBFOX3-203ENST00000580155 PEG3Q9GZU2 1588 aa25.79■■□□□ 1.72
RBFOX3-203ENST00000580155 BAZ1BQ9UIG0 1483 aaKnown RBP25.77■■□□□ 1.72
RBFOX3-203ENST00000580155 NESP48681 1621 aa25.6■■□□□ 1.69
RBFOX3-203ENST00000580155 WIZO95785 1651 aa25.58■■□□□ 1.69
RBFOX3-203ENST00000580155 ERCC6Q03468 1493 aa25.55■■□□□ 1.68
RBFOX3-203ENST00000580155 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.65
RBFOX3-203ENST00000580155 CUX2O14529 1486 aa25.37■■□□□ 1.65
RBFOX3-203ENST00000580155 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
RBFOX3-203ENST00000580155 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
RBFOX3-203ENST00000580155 THOC2Q8NI27 1593 aaKnown RBP25.29■■□□□ 1.64
RBFOX3-203ENST00000580155 TOP2AP11388 1531 aaKnown RBP25.23■■□□□ 1.63
RBFOX3-203ENST00000580155 CADPSQ9ULU8 1353 aa25.2■■□□□ 1.63
RBFOX3-203ENST00000580155 PDS5BQ9NTI5 1447 aa25.18■■□□□ 1.62
RBFOX3-203ENST00000580155 MRC2Q9UBG0 1479 aa25.01■■□□□ 1.59
RBFOX3-203ENST00000580155 CFTRP13569 1480 aa25.01■■□□□ 1.59
RBFOX3-203ENST00000580155 FANCD2Q9BXW9 1451 aa24.98■■□□□ 1.59
RBFOX3-203ENST00000580155 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
RBFOX3-203ENST00000580155 DNAJC5Q9H3Z4 198 aa24.96■■□□□ 1.59
RBFOX3-203ENST00000580155 WDR62O43379 1518 aa24.95■■□□□ 1.59
RBFOX3-203ENST00000580155 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
RBFOX3-203ENST00000580155 PRDM2Q13029 1718 aa24.89■■□□□ 1.57
RBFOX3-203ENST00000580155 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
RBFOX3-203ENST00000580155 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
RBFOX3-203ENST00000580155 DNMBPQ6XZF7 1577 aa24.49■■□□□ 1.51
RBFOX3-203ENST00000580155 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
RBFOX3-203ENST00000580155 ZNF608Q9ULD9 1512 aaPredicted RBP24.44■■□□□ 1.5
RBFOX3-203ENST00000580155 IFT140Q96RY7 1462 aa24.43■■□□□ 1.5
RBFOX3-203ENST00000580155 ABCC8Q09428 1581 aa24.41■■□□□ 1.5
RBFOX3-203ENST00000580155 EIF4G3O43432 1585 aaKnown RBP24.35■■□□□ 1.49
RBFOX3-203ENST00000580155 TARBP1Q13395 1621 aaKnown RBP24.34■■□□□ 1.49
RBFOX3-203ENST00000580155 POLA1P09884 1462 aaPredicted RBP24.33■■□□□ 1.48
RBFOX3-203ENST00000580155 CUX1P39880 1505 aa24.27■■□□□ 1.48
RBFOX3-203ENST00000580155 RAD54L2Q9Y4B4 1467 aa24.25■■□□□ 1.47
RBFOX3-203ENST00000580155 AQRO60306 1485 aaKnown RBP eCLIP24.22■■□□□ 1.47
RBFOX3-203ENST00000580155 FGD5Q6ZNL6 1462 aa24.22■■□□□ 1.47
RBFOX3-203ENST00000580155 OSCARQ8IYS5 282 aa24.2■■□□□ 1.46
RBFOX3-203ENST00000580155 SOGA1O94964 1423 aa24.16■■□□□ 1.46
RBFOX3-203ENST00000580155 CHD1O14646 1710 aa24.14■■□□□ 1.45
RBFOX3-203ENST00000580155 TDRD9Q8NDG6 1382 aaKnown RBP24.12■■□□□ 1.45
RBFOX3-203ENST00000580155 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
RBFOX3-203ENST00000580155 TRIM41Q8WV44 630 aa24.09■■□□□ 1.45
RBFOX3-203ENST00000580155 SNAPC4Q5SXM2 1469 aa24.01■■□□□ 1.43
RBFOX3-203ENST00000580155 RIMBP3CA6NJZ7 1639 aa24■■□□□ 1.43
RBFOX3-203ENST00000580155 RIMBP3BA6NNM3 1639 aa24■■□□□ 1.43
RBFOX3-203ENST00000580155 RIMBP3Q9UFD9 1639 aa24■■□□□ 1.43
RBFOX3-203ENST00000580155 SYNJ1O43426 1573 aa23.98■■□□□ 1.43
RBFOX3-203ENST00000580155 FBLN2P98095 1184 aa23.97■■□□□ 1.43
RBFOX3-203ENST00000580155 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
RBFOX3-203ENST00000580155 BIVM-ERCC5R4GMW8 1640 aa23.96■■□□□ 1.43
RBFOX3-203ENST00000580155 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
RBFOX3-203ENST00000580155 ARHGEF11O15085 1522 aa23.93■■□□□ 1.42
RBFOX3-203ENST00000580155 ABCA5Q8WWZ7 1642 aa23.93■■□□□ 1.42
RBFOX3-203ENST00000580155 GRIN2BQ13224 1484 aa23.93■■□□□ 1.42
RBFOX3-203ENST00000580155 ABCA10Q8WWZ4 1543 aa23.93■■□□□ 1.42
RBFOX3-203ENST00000580155 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
RBFOX3-203ENST00000580155 MAGI1Q96QZ7 1491 aaPredicted RBP23.9■■□□□ 1.42
RBFOX3-203ENST00000580155 GAPVD1Q14C86 1478 aa23.89■■□□□ 1.42
RBFOX3-203ENST00000580155 SYNJ2O15056 1496 aa23.83■■□□□ 1.4
RBFOX3-203ENST00000580155 CLASP1Q7Z460 1538 aa23.81■■□□□ 1.4
RBFOX3-203ENST00000580155 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
RBFOX3-203ENST00000580155 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
RBFOX3-203ENST00000580155 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
RBFOX3-203ENST00000580155 CYB5RLQ6IPT4 315 aa23.67■■□□□ 1.38
RBFOX3-203ENST00000580155 GRIN2AQ12879 1464 aa23.65■■□□□ 1.38
RBFOX3-203ENST00000580155 ERICH3Q5RHP9 1530 aa23.63■■□□□ 1.37
RBFOX3-203ENST00000580155 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
RBFOX3-203ENST00000580155 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
RBFOX3-203ENST00000580155 NUP160Q12769 1436 aa23.54■■□□□ 1.36
RBFOX3-203ENST00000580155 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
RBFOX3-203ENST00000580155 SHROOM2Q13796 1616 aa23.45■■□□□ 1.34
RBFOX3-203ENST00000580155 KIF27Q86VH2 1401 aa23.41■■□□□ 1.34
RBFOX3-203ENST00000580155 RUSC2Q8N2Y8 1516 aa23.4■■□□□ 1.34
RBFOX3-203ENST00000580155 CUL7Q14999 1698 aa23.38■■□□□ 1.33
RBFOX3-203ENST00000580155 IGF1RP08069 1367 aa23.37■■□□□ 1.33
RBFOX3-203ENST00000580155 TRHP20396 242 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms