RNA–Protein interactions for RNA: ENST00000549424.1

AC009779.3-204, humanhuman

TSL 3 BASIC

Gene AC009779.3, Length 367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009779.3-204ENST00000549424 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
AC009779.3-204ENST00000549424 CCDC180Q9P1Z9 1646 aa29.91■■■□□ 2.38
AC009779.3-204ENST00000549424 ABCC9O60706 1549 aa29.76■■■□□ 2.36
AC009779.3-204ENST00000549424 RB1CC1Q8TDY2 1594 aa28.45■■■□□ 2.14
AC009779.3-204ENST00000549424 NACADO15069 1562 aa28.28■■■□□ 2.12
AC009779.3-204ENST00000549424 MYO15BQ96JP2 1530 aa27.97■■■□□ 2.07
AC009779.3-204ENST00000549424 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.06
AC009779.3-204ENST00000549424 DNAJC5BQ9UF47 199 aa27.93■■■□□ 2.06
AC009779.3-204ENST00000549424 UNC13AQ9UPW8 1703 aa27.73■■■□□ 2.03
AC009779.3-204ENST00000549424 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
AC009779.3-204ENST00000549424 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
AC009779.3-204ENST00000549424 BICRAQ9NZM4 1560 aa27.58■■■□□ 2.01
AC009779.3-204ENST00000549424 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
AC009779.3-204ENST00000549424 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
AC009779.3-204ENST00000549424 SCRIBQ14160 1630 aa27.1■■□□□ 1.93
AC009779.3-204ENST00000549424 CC2D2AQ9P2K1 1620 aa26.94■■□□□ 1.9
AC009779.3-204ENST00000549424 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
AC009779.3-204ENST00000549424 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
AC009779.3-204ENST00000549424 NCAPD3P42695 1498 aa26.12■■□□□ 1.77
AC009779.3-204ENST00000549424 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
AC009779.3-204ENST00000549424 SMARCA2P51531 1590 aa25.95■■□□□ 1.74
AC009779.3-204ENST00000549424 SMARCA4P51532 1647 aa25.94■■□□□ 1.74
AC009779.3-204ENST00000549424 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
AC009779.3-204ENST00000549424 BAZ1AQ9NRL2 1556 aaPredicted RBP25.85■■□□□ 1.73
AC009779.3-204ENST00000549424 CUX2O14529 1486 aa25.79■■□□□ 1.72
AC009779.3-204ENST00000549424 PEG3Q9GZU2 1588 aa25.77■■□□□ 1.72
AC009779.3-204ENST00000549424 DNAJC5Q9H3Z4 198 aa25.75■■□□□ 1.71
AC009779.3-204ENST00000549424 ERCC6Q03468 1493 aa25.73■■□□□ 1.71
AC009779.3-204ENST00000549424 BAZ1BQ9UIG0 1483 aaKnown RBP25.71■■□□□ 1.71
AC009779.3-204ENST00000549424 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
AC009779.3-204ENST00000549424 NESP48681 1621 aa25.56■■□□□ 1.68
AC009779.3-204ENST00000549424 LAMC3Q9Y6N6 1575 aa25.52■■□□□ 1.68
AC009779.3-204ENST00000549424 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
AC009779.3-204ENST00000549424 THOC2Q8NI27 1593 aaKnown RBP25.36■■□□□ 1.65
AC009779.3-204ENST00000549424 CADPSQ9ULU8 1353 aa25.29■■□□□ 1.64
AC009779.3-204ENST00000549424 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
AC009779.3-204ENST00000549424 WIZO95785 1651 aa25.25■■□□□ 1.63
AC009779.3-204ENST00000549424 MRC2Q9UBG0 1479 aa25.1■■□□□ 1.61
AC009779.3-204ENST00000549424 RSF1Q96T23 1441 aaPredicted RBP25.1■■□□□ 1.61
AC009779.3-204ENST00000549424 WDR62O43379 1518 aa25.06■■□□□ 1.6
AC009779.3-204ENST00000549424 CFTRP13569 1480 aa25.02■■□□□ 1.6
AC009779.3-204ENST00000549424 CEP164Q9UPV0 1460 aa25■■□□□ 1.59
AC009779.3-204ENST00000549424 TOP2AP11388 1531 aaKnown RBP25■■□□□ 1.59
AC009779.3-204ENST00000549424 FANCD2Q9BXW9 1451 aa24.96■■□□□ 1.59
AC009779.3-204ENST00000549424 URB2Q14146 1524 aaKnown RBP24.74■■□□□ 1.55
AC009779.3-204ENST00000549424 PRDM2Q13029 1718 aa24.74■■□□□ 1.55
AC009779.3-204ENST00000549424 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.54
AC009779.3-204ENST00000549424 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
AC009779.3-204ENST00000549424 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
AC009779.3-204ENST00000549424 IFT140Q96RY7 1462 aa24.53■■□□□ 1.52
AC009779.3-204ENST00000549424 TOPBP1Q92547 1522 aa24.49■■□□□ 1.51
AC009779.3-204ENST00000549424 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
AC009779.3-204ENST00000549424 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
AC009779.3-204ENST00000549424 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
AC009779.3-204ENST00000549424 TARBP1Q13395 1621 aaKnown RBP24.29■■□□□ 1.48
AC009779.3-204ENST00000549424 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
AC009779.3-204ENST00000549424 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
AC009779.3-204ENST00000549424 RIMBP3CA6NJZ7 1639 aa24.2■■□□□ 1.46
AC009779.3-204ENST00000549424 RIMBP3BA6NNM3 1639 aa24.2■■□□□ 1.46
AC009779.3-204ENST00000549424 RIMBP3Q9UFD9 1639 aa24.2■■□□□ 1.46
AC009779.3-204ENST00000549424 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.462e-8■■■■■ 31.5
AC009779.3-204ENST00000549424 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
AC009779.3-204ENST00000549424 WDR97A6NE52 1622 aa24.14■■□□□ 1.46
AC009779.3-204ENST00000549424 SOGA1O94964 1423 aa24.13■■□□□ 1.45
AC009779.3-204ENST00000549424 CHD1O14646 1710 aa24.1■■□□□ 1.45
AC009779.3-204ENST00000549424 RAD54L2Q9Y4B4 1467 aa24.09■■□□□ 1.45
AC009779.3-204ENST00000549424 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
AC009779.3-204ENST00000549424 CUX1P39880 1505 aa24.05■■□□□ 1.44
AC009779.3-204ENST00000549424 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
AC009779.3-204ENST00000549424 FBLN2P98095 1184 aa24■■□□□ 1.43
AC009779.3-204ENST00000549424 MAGI1Q96QZ7 1491 aaPredicted RBP23.97■■□□□ 1.43
AC009779.3-204ENST00000549424 GRIN2BQ13224 1484 aa23.95■■□□□ 1.42
AC009779.3-204ENST00000549424 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
AC009779.3-204ENST00000549424 CYB5RLQ6IPT4 315 aa23.93■■□□□ 1.42
AC009779.3-204ENST00000549424 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
AC009779.3-204ENST00000549424 ARAP1Q96P48 1450 aa23.89■■□□□ 1.42
AC009779.3-204ENST00000549424 CLASP1Q7Z460 1538 aa23.88■■□□□ 1.41
AC009779.3-204ENST00000549424 SYNJ2O15056 1496 aa23.87■■□□□ 1.41
AC009779.3-204ENST00000549424 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
AC009779.3-204ENST00000549424 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
AC009779.3-204ENST00000549424 ABCA10Q8WWZ4 1543 aa23.85■■□□□ 1.41
AC009779.3-204ENST00000549424 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
AC009779.3-204ENST00000549424 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
AC009779.3-204ENST00000549424 ABCA5Q8WWZ7 1642 aa23.78■■□□□ 1.4
AC009779.3-204ENST00000549424 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
AC009779.3-204ENST00000549424 TOP2BQ02880 1626 aa23.7■■□□□ 1.39
AC009779.3-204ENST00000549424 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.39
AC009779.3-204ENST00000549424 TRHP20396 242 aaPredicted RBP23.64■■□□□ 1.37
AC009779.3-204ENST00000549424 GRIN2AQ12879 1464 aa23.62■■□□□ 1.37
AC009779.3-204ENST00000549424 ADAMTS12P58397 1594 aa23.59■■□□□ 1.37
AC009779.3-204ENST00000549424 FHAD1B1AJZ9 1412 aa23.58■■□□□ 1.36
AC009779.3-204ENST00000549424 NUP160Q12769 1436 aa23.58■■□□□ 1.36
AC009779.3-204ENST00000549424 ERICH3Q5RHP9 1530 aa23.57■■□□□ 1.36
AC009779.3-204ENST00000549424 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
AC009779.3-204ENST00000549424 SHROOM2Q13796 1616 aa23.46■■□□□ 1.35
AC009779.3-204ENST00000549424 ERCC6L2Q5T890 1561 aa23.41■■□□□ 1.34
AC009779.3-204ENST00000549424 JPH4Q96JJ6 628 aa23.31■■□□□ 1.32
AC009779.3-204ENST00000549424 PRG4Q92954 1404 aaPredicted RBP23.3■■□□□ 1.32
AC009779.3-204ENST00000549424 RUSC2Q8N2Y8 1516 aa23.25■■□□□ 1.31
AC009779.3-204ENST00000549424 KIF27Q86VH2 1401 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms