RNA–Protein interactions for RNA: ENST00000580149.1

TRMT112P3-201, Transcript of tRNA methyltransferase subunit 11-2 pseudogene 3, humanhuman

BASIC

Gene TRMT112P3, Length 358 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT112P3-201ENST00000580149 NISCHQ9Y2I1 1504 aa33.56■■■□□ 2.96
TRMT112P3-201ENST00000580149 CCDC180Q9P1Z9 1646 aa30.03■■■□□ 2.4
TRMT112P3-201ENST00000580149 ABCC9O60706 1549 aa29.56■■■□□ 2.32
TRMT112P3-201ENST00000580149 RB1CC1Q8TDY2 1594 aa28.32■■■□□ 2.12
TRMT112P3-201ENST00000580149 NACADO15069 1562 aa28.19■■■□□ 2.1
TRMT112P3-201ENST00000580149 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
TRMT112P3-201ENST00000580149 ZCCHC6Q5VYS8 1495 aaKnown RBP27.92■■■□□ 2.06
TRMT112P3-201ENST00000580149 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
TRMT112P3-201ENST00000580149 UNC13AQ9UPW8 1703 aa27.87■■■□□ 2.05
TRMT112P3-201ENST00000580149 DCAF1Q9Y4B6 1507 aa27.7■■■□□ 2.02
TRMT112P3-201ENST00000580149 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
TRMT112P3-201ENST00000580149 BICRAQ9NZM4 1560 aa27.49■■□□□ 1.99
TRMT112P3-201ENST00000580149 SCRIBQ14160 1630 aa27.42■■□□□ 1.98
TRMT112P3-201ENST00000580149 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
TRMT112P3-201ENST00000580149 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
TRMT112P3-201ENST00000580149 EIF4G1Q04637 1599 aaKnown RBP26.77■■□□□ 1.88
TRMT112P3-201ENST00000580149 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
TRMT112P3-201ENST00000580149 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
TRMT112P3-201ENST00000580149 SMARCA4P51532 1647 aa26.16■■□□□ 1.78
TRMT112P3-201ENST00000580149 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
TRMT112P3-201ENST00000580149 ATAD2BQ9ULI0 1458 aa25.99■■□□□ 1.75
TRMT112P3-201ENST00000580149 SMARCA2P51531 1590 aa25.97■■□□□ 1.75
TRMT112P3-201ENST00000580149 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
TRMT112P3-201ENST00000580149 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
TRMT112P3-201ENST00000580149 HMGXB3Q12766 1538 aa25.88■■□□□ 1.73
TRMT112P3-201ENST00000580149 PEG3Q9GZU2 1588 aa25.83■■□□□ 1.73
TRMT112P3-201ENST00000580149 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
TRMT112P3-201ENST00000580149 WIZO95785 1651 aa25.69■■□□□ 1.7
TRMT112P3-201ENST00000580149 NESP48681 1621 aa25.52■■□□□ 1.68
TRMT112P3-201ENST00000580149 ERCC6Q03468 1493 aa25.48■■□□□ 1.67
TRMT112P3-201ENST00000580149 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
TRMT112P3-201ENST00000580149 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.66
TRMT112P3-201ENST00000580149 KIF21AQ7Z4S6 1674 aa25.33■■□□□ 1.65
TRMT112P3-201ENST00000580149 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
TRMT112P3-201ENST00000580149 CUX2O14529 1486 aa25.24■■□□□ 1.63
TRMT112P3-201ENST00000580149 THOC2Q8NI27 1593 aaKnown RBP25.22■■□□□ 1.63
TRMT112P3-201ENST00000580149 CADPSQ9ULU8 1353 aa25.19■■□□□ 1.62
TRMT112P3-201ENST00000580149 PDS5BQ9NTI5 1447 aa25.16■■□□□ 1.62
TRMT112P3-201ENST00000580149 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
TRMT112P3-201ENST00000580149 CFTRP13569 1480 aa25.02■■□□□ 1.6
TRMT112P3-201ENST00000580149 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
TRMT112P3-201ENST00000580149 MRC2Q9UBG0 1479 aa24.98■■□□□ 1.59
TRMT112P3-201ENST00000580149 CEP164Q9UPV0 1460 aa24.98■■□□□ 1.59
TRMT112P3-201ENST00000580149 FANCD2Q9BXW9 1451 aa24.97■■□□□ 1.59
TRMT112P3-201ENST00000580149 WDR62O43379 1518 aa24.91■■□□□ 1.58
TRMT112P3-201ENST00000580149 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
TRMT112P3-201ENST00000580149 SUPT5HO00267 1087 aaKnown RBP24.69■■□□□ 1.54
TRMT112P3-201ENST00000580149 DNAJC5Q9H3Z4 198 aa24.65■■□□□ 1.54
TRMT112P3-201ENST00000580149 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
TRMT112P3-201ENST00000580149 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
TRMT112P3-201ENST00000580149 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
TRMT112P3-201ENST00000580149 IFT140Q96RY7 1462 aa24.42■■□□□ 1.5
TRMT112P3-201ENST00000580149 ZNF608Q9ULD9 1512 aaPredicted RBP24.39■■□□□ 1.49
TRMT112P3-201ENST00000580149 EIF4G3O43432 1585 aaKnown RBP24.35■■□□□ 1.49
TRMT112P3-201ENST00000580149 TARBP1Q13395 1621 aaKnown RBP24.35■■□□□ 1.49
TRMT112P3-201ENST00000580149 POLA1P09884 1462 aaPredicted RBP24.33■■□□□ 1.49
TRMT112P3-201ENST00000580149 CUX1P39880 1505 aa24.32■■□□□ 1.48
TRMT112P3-201ENST00000580149 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
TRMT112P3-201ENST00000580149 RAD54L2Q9Y4B4 1467 aa24.25■■□□□ 1.47
TRMT112P3-201ENST00000580149 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.46
TRMT112P3-201ENST00000580149 SOGA1O94964 1423 aa24.18■■□□□ 1.46
TRMT112P3-201ENST00000580149 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
TRMT112P3-201ENST00000580149 CHD1O14646 1710 aa24.16■■□□□ 1.46
TRMT112P3-201ENST00000580149 BIVM-ERCC5R4GMW8 1640 aa24.1■■□□□ 1.45
TRMT112P3-201ENST00000580149 TDRD9Q8NDG6 1382 aaKnown RBP24.09■■□□□ 1.45
TRMT112P3-201ENST00000580149 OSCARQ8IYS5 282 aa24.08■■□□□ 1.45
TRMT112P3-201ENST00000580149 SYNJ1O43426 1573 aa24.08■■□□□ 1.44
TRMT112P3-201ENST00000580149 PBRM1Q86U86 1689 aa24.06■■□□□ 1.44
TRMT112P3-201ENST00000580149 TOP2BQ02880 1626 aa24.05■■□□□ 1.44
TRMT112P3-201ENST00000580149 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
TRMT112P3-201ENST00000580149 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
TRMT112P3-201ENST00000580149 ABCA5Q8WWZ7 1642 aa23.98■■□□□ 1.43
TRMT112P3-201ENST00000580149 ABCA10Q8WWZ4 1543 aa23.97■■□□□ 1.43
TRMT112P3-201ENST00000580149 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
TRMT112P3-201ENST00000580149 FBLN2P98095 1184 aa23.94■■□□□ 1.42
TRMT112P3-201ENST00000580149 GAPVD1Q14C86 1478 aa23.93■■□□□ 1.42
TRMT112P3-201ENST00000580149 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
TRMT112P3-201ENST00000580149 RIMBP3CA6NJZ7 1639 aa23.91■■□□□ 1.42
TRMT112P3-201ENST00000580149 RIMBP3BA6NNM3 1639 aa23.91■■□□□ 1.42
TRMT112P3-201ENST00000580149 RIMBP3Q9UFD9 1639 aa23.91■■□□□ 1.42
TRMT112P3-201ENST00000580149 TRIM41Q8WV44 630 aa23.87■■□□□ 1.41
TRMT112P3-201ENST00000580149 ARHGEF11O15085 1522 aa23.82■■□□□ 1.4
TRMT112P3-201ENST00000580149 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
TRMT112P3-201ENST00000580149 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
TRMT112P3-201ENST00000580149 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
TRMT112P3-201ENST00000580149 CLASP1Q7Z460 1538 aa23.76■■□□□ 1.39
TRMT112P3-201ENST00000580149 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
TRMT112P3-201ENST00000580149 GRIN2AQ12879 1464 aa23.66■■□□□ 1.38
TRMT112P3-201ENST00000580149 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
TRMT112P3-201ENST00000580149 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
TRMT112P3-201ENST00000580149 FHAD1B1AJZ9 1412 aa23.61■■□□□ 1.37
TRMT112P3-201ENST00000580149 CYB5RLQ6IPT4 315 aa23.54■■□□□ 1.36
TRMT112P3-201ENST00000580149 NUP160Q12769 1436 aa23.53■■□□□ 1.36
TRMT112P3-201ENST00000580149 KIF27Q86VH2 1401 aa23.51■■□□□ 1.35
TRMT112P3-201ENST00000580149 CUL7Q14999 1698 aa23.51■■□□□ 1.35
TRMT112P3-201ENST00000580149 ERCC6L2Q5T890 1561 aa23.47■■□□□ 1.35
TRMT112P3-201ENST00000580149 SHROOM2Q13796 1616 aa23.46■■□□□ 1.35
TRMT112P3-201ENST00000580149 RUSC2Q8N2Y8 1516 aa23.43■■□□□ 1.34
TRMT112P3-201ENST00000580149 IGF1RP08069 1367 aa23.41■■□□□ 1.34
TRMT112P3-201ENST00000580149 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms