RNA–Protein interactions for RNA: ENST00000588260.1

AC003043.1-201, humanhuman

TSL 3 BASIC

Gene AC003043.1, Length 337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003043.1-201ENST00000588260 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
AC003043.1-201ENST00000588260 CCDC180Q9P1Z9 1646 aa29.94■■■□□ 2.38
AC003043.1-201ENST00000588260 ABCC9O60706 1549 aa29.33■■■□□ 2.29
AC003043.1-201ENST00000588260 RB1CC1Q8TDY2 1594 aa28.21■■■□□ 2.11
AC003043.1-201ENST00000588260 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.1
AC003043.1-201ENST00000588260 NACADO15069 1562 aa28.14■■■□□ 2.1
AC003043.1-201ENST00000588260 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.07
AC003043.1-201ENST00000588260 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
AC003043.1-201ENST00000588260 DCAF1Q9Y4B6 1507 aa27.78■■■□□ 2.04
AC003043.1-201ENST00000588260 UNC13AQ9UPW8 1703 aa27.55■■■□□ 2
AC003043.1-201ENST00000588260 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.97
AC003043.1-201ENST00000588260 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
AC003043.1-201ENST00000588260 BICRAQ9NZM4 1560 aa27.3■■□□□ 1.96
AC003043.1-201ENST00000588260 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
AC003043.1-201ENST00000588260 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.9
AC003043.1-201ENST00000588260 EIF4G1Q04637 1599 aaKnown RBP26.61■■□□□ 1.85
AC003043.1-201ENST00000588260 CC2D2AQ9P2K1 1620 aa26.52■■□□□ 1.84
AC003043.1-201ENST00000588260 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
AC003043.1-201ENST00000588260 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
AC003043.1-201ENST00000588260 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
AC003043.1-201ENST00000588260 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
AC003043.1-201ENST00000588260 SMARCA2P51531 1590 aa25.95■■□□□ 1.75
AC003043.1-201ENST00000588260 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
AC003043.1-201ENST00000588260 NCAPD3P42695 1498 aa25.93■■□□□ 1.74
AC003043.1-201ENST00000588260 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
AC003043.1-201ENST00000588260 HMGXB3Q12766 1538 aa25.83■■□□□ 1.73
AC003043.1-201ENST00000588260 PEG3Q9GZU2 1588 aa25.82■■□□□ 1.72
AC003043.1-201ENST00000588260 BAZ1BQ9UIG0 1483 aaKnown RBP25.77■■□□□ 1.72
AC003043.1-201ENST00000588260 WIZO95785 1651 aa25.61■■□□□ 1.69
AC003043.1-201ENST00000588260 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
AC003043.1-201ENST00000588260 TOP2AP11388 1531 aaKnown RBP25.35■■□□□ 1.65
AC003043.1-201ENST00000588260 NESP48681 1621 aa25.34■■□□□ 1.65
AC003043.1-201ENST00000588260 ERCC6Q03468 1493 aa25.33■■□□□ 1.65
AC003043.1-201ENST00000588260 LAMC3Q9Y6N6 1575 aa25.31■■□□□ 1.64
AC003043.1-201ENST00000588260 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
AC003043.1-201ENST00000588260 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
AC003043.1-201ENST00000588260 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
AC003043.1-201ENST00000588260 CUX2O14529 1486 aa25.05■■□□□ 1.6
AC003043.1-201ENST00000588260 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
AC003043.1-201ENST00000588260 CFTRP13569 1480 aa25.02■■□□□ 1.6
AC003043.1-201ENST00000588260 THOC2Q8NI27 1593 aaKnown RBP24.98■■□□□ 1.59
AC003043.1-201ENST00000588260 FANCD2Q9BXW9 1451 aa24.91■■□□□ 1.58
AC003043.1-201ENST00000588260 CEP164Q9UPV0 1460 aa24.91■■□□□ 1.58
AC003043.1-201ENST00000588260 SUPT5HO00267 1087 aaKnown RBP24.9■■□□□ 1.58
AC003043.1-201ENST00000588260 PRDM2Q13029 1718 aa24.89■■□□□ 1.58
AC003043.1-201ENST00000588260 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
AC003043.1-201ENST00000588260 MRC2Q9UBG0 1479 aa24.88■■□□□ 1.57
AC003043.1-201ENST00000588260 WDR62O43379 1518 aa24.78■■□□□ 1.56
AC003043.1-201ENST00000588260 URB2Q14146 1524 aaKnown RBP24.65■■□□□ 1.54
AC003043.1-201ENST00000588260 ABCC8Q09428 1581 aa24.53■■□□□ 1.52
AC003043.1-201ENST00000588260 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
AC003043.1-201ENST00000588260 DNMBPQ6XZF7 1577 aa24.49■■□□□ 1.51
AC003043.1-201ENST00000588260 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
AC003043.1-201ENST00000588260 DNAJC5Q9H3Z4 198 aa24.32■■□□□ 1.48
AC003043.1-201ENST00000588260 POLA1P09884 1462 aaPredicted RBP24.28■■□□□ 1.48
AC003043.1-201ENST00000588260 CUX1P39880 1505 aa24.28■■□□□ 1.48
AC003043.1-201ENST00000588260 ZNF608Q9ULD9 1512 aaPredicted RBP24.24■■□□□ 1.47
AC003043.1-201ENST00000588260 TARBP1Q13395 1621 aaKnown RBP24.24■■□□□ 1.47
AC003043.1-201ENST00000588260 FGD5Q6ZNL6 1462 aa24.23■■□□□ 1.47
AC003043.1-201ENST00000588260 SOGA1O94964 1423 aa24.19■■□□□ 1.46
AC003043.1-201ENST00000588260 EIF4G3O43432 1585 aaKnown RBP24.19■■□□□ 1.46
AC003043.1-201ENST00000588260 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
AC003043.1-201ENST00000588260 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.45
AC003043.1-201ENST00000588260 AQRO60306 1485 aaKnown RBP eCLIP24.1■■□□□ 1.45
AC003043.1-201ENST00000588260 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
AC003043.1-201ENST00000588260 WDR97A6NE52 1622 aa24.08■■□□□ 1.45
AC003043.1-201ENST00000588260 TOP2BQ02880 1626 aa24.08■■□□□ 1.45
AC003043.1-201ENST00000588260 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
AC003043.1-201ENST00000588260 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
AC003043.1-201ENST00000588260 OSCARQ8IYS5 282 aa24■■□□□ 1.43
AC003043.1-201ENST00000588260 ABCA10Q8WWZ4 1543 aa23.99■■□□□ 1.43
AC003043.1-201ENST00000588260 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
AC003043.1-201ENST00000588260 GAPVD1Q14C86 1478 aa23.93■■□□□ 1.42
AC003043.1-201ENST00000588260 CHD1O14646 1710 aa23.91■■□□□ 1.42
AC003043.1-201ENST00000588260 PBRM1Q86U86 1689 aa23.91■■□□□ 1.42
AC003043.1-201ENST00000588260 SNAPC4Q5SXM2 1469 aa23.9■■□□□ 1.42
AC003043.1-201ENST00000588260 ABCA5Q8WWZ7 1642 aa23.9■■□□□ 1.42
AC003043.1-201ENST00000588260 FBLN2P98095 1184 aa23.88■■□□□ 1.41
AC003043.1-201ENST00000588260 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
AC003043.1-201ENST00000588260 CHMP7Q8WUX9 453 aaPredicted RBP23.8■■□□□ 1.4
AC003043.1-201ENST00000588260 SYNJ2O15056 1496 aa23.79■■□□□ 1.4
AC003043.1-201ENST00000588260 ERICH3Q5RHP9 1530 aa23.71■■□□□ 1.39
AC003043.1-201ENST00000588260 ADAMTS12P58397 1594 aa23.69■■□□□ 1.38
AC003043.1-201ENST00000588260 FHAD1B1AJZ9 1412 aa23.64■■□□□ 1.37
AC003043.1-201ENST00000588260 KIF27Q86VH2 1401 aa23.64■■□□□ 1.37
AC003043.1-201ENST00000588260 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
AC003043.1-201ENST00000588260 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
AC003043.1-201ENST00000588260 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
AC003043.1-201ENST00000588260 GRIN2AQ12879 1464 aa23.62■■□□□ 1.37
AC003043.1-201ENST00000588260 ARHGEF11O15085 1522 aa23.6■■□□□ 1.37
AC003043.1-201ENST00000588260 CLASP1Q7Z460 1538 aa23.6■■□□□ 1.37
AC003043.1-201ENST00000588260 TRIM41Q8WV44 630 aa23.55■■□□□ 1.36
AC003043.1-201ENST00000588260 CUL7Q14999 1698 aa23.52■■□□□ 1.36
AC003043.1-201ENST00000588260 IGF1RP08069 1367 aa23.5■■□□□ 1.35
AC003043.1-201ENST00000588260 CEP170Q5SW79 1584 aa23.49■■□□□ 1.35
AC003043.1-201ENST00000588260 NUP160Q12769 1436 aa23.49■■□□□ 1.35
AC003043.1-201ENST00000588260 ARAP1Q96P48 1450 aa23.4■■□□□ 1.34
AC003043.1-201ENST00000588260 CYB5RLQ6IPT4 315 aa23.39■■□□□ 1.33
AC003043.1-201ENST00000588260 CARMIL1Q5VZK9 1371 aa23.39■■□□□ 1.33
AC003043.1-201ENST00000588260 RUSC2Q8N2Y8 1516 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms