Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BBS1Q8NFJ9 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BBS1Q8NFJ9 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.61□□□□□ -0.23
BBS1Q8NFJ9 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
BBS1Q8NFJ9 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.61□□□□□ -0.23
BBS1Q8NFJ9 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BBS1Q8NFJ9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BBS1Q8NFJ9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
BBS1Q8NFJ9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
BBS1Q8NFJ9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BBS1Q8NFJ9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 AP000347.1-202ENST00000435868 847 ntBASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 SDHAP3-202ENST00000515467 728 ntBASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 AC027612.4-201ENST00000605371 583 ntBASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 AC011474.4-201ENST00000623523 2076 ntBASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 MST1P2-201ENST00000457982 2291 ntBASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.6□□□□□ -0.23
BBS1Q8NFJ9 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 AC211486.1-202ENST00000416371 468 ntBASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 AC004066.1-201ENST00000502488 802 ntBASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 AC211476.1-201ENST00000503899 468 ntBASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 AC109322.1-201ENST00000524499 1264 ntBASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms