RNA–Protein interactions for RNA: ENST00000269844.4

PRDM15-201, Transcript of PR/SET domain 15, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM15, Length 4,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-201ENST00000269844 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
PRDM15-201ENST00000269844 MYT1Q01538 1121 aa24■■□□□ 1.43
PRDM15-201ENST00000269844 DCAF8L2P0C7V8 631 aa23.46■■□□□ 1.35
PRDM15-201ENST00000269844 PCGF6Q9BYE7 350 aa22.94■■□□□ 1.26
PRDM15-201ENST00000269844 CENPBP07199 599 aaPredicted RBP22.86■■□□□ 1.25
PRDM15-201ENST00000269844 SUPT5HO00267 1087 aaKnown RBP22.8■■□□□ 1.24
PRDM15-201ENST00000269844 HRCP23327 699 aa22.59■■□□□ 1.21
PRDM15-201ENST00000269844 ERICH6Q7L0X2 663 aa22.53■■□□□ 1.2
PRDM15-201ENST00000269844 NISCHQ9Y2I1 1504 aa22.51■■□□□ 1.19
PRDM15-201ENST00000269844 ZEB1P37275 1124 aaPredicted RBP22.48■■□□□ 1.19
PRDM15-201ENST00000269844 CCER1Q8TC90 406 aaPredicted RBP22.19■■□□□ 1.14
PRDM15-201ENST00000269844 PPARGC1BQ86YN6 1023 aaKnown RBP22.12■■□□□ 1.13
PRDM15-201ENST00000269844 YTHDC1Q96MU7 727 aaKnown RBP22.12■■□□□ 1.13
PRDM15-201ENST00000269844 TTBK1Q5TCY1 1321 aaPredicted RBP22.11■■□□□ 1.13
PRDM15-201ENST00000269844 EHMT2Q96KQ7 1210 aa22.01■■□□□ 1.11
PRDM15-201ENST00000269844 SHROOM4Q9ULL8 1493 aa21.95■■□□□ 1.1
PRDM15-201ENST00000269844 NEFLP07196 543 aa21.75■■□□□ 1.07
PRDM15-201ENST00000269844 GTF3C3Q9Y5Q9 886 aa21.71■■□□□ 1.07
PRDM15-201ENST00000269844 TRIM26Q12899 539 aaPredicted RBP21.66■■□□□ 1.06
PRDM15-201ENST00000269844 FAM9AQ8IZU1 332 aaPredicted RBP21.55■■□□□ 1.04
PRDM15-201ENST00000269844 APLP2Q06481 763 aa21.52■■□□□ 1.04
PRDM15-201ENST00000269844 ACIN1Q9UKV3 1341 aaKnown RBP21.43■■□□□ 1.02
PRDM15-201ENST00000269844 DIEXFQ68CQ4 756 aaKnown RBP21.35■■□□□ 1.01
PRDM15-201ENST00000269844 SCAF1Q9H7N4 1312 aaKnown RBP21.32■■□□□ 1
PRDM15-201ENST00000269844 RTL5Q5HYW3 569 aaPredicted RBP21.25■□□□□ 0.99
PRDM15-201ENST00000269844 BCL11AQ9H165 835 aa20.99■□□□□ 0.95
PRDM15-201ENST00000269844 BCANQ96GW7 911 aa20.97■□□□□ 0.95
PRDM15-201ENST00000269844 NEUROD1Q13562 356 aa20.96■□□□□ 0.95
PRDM15-201ENST00000269844 DAXXQ9UER7 740 aaPredicted RBP20.96■□□□□ 0.95
PRDM15-201ENST00000269844 LOC105371045A0A1W2PR82 267 aa20.94■□□□□ 0.94
PRDM15-201ENST00000269844 EIF5BO60841 1220 aaKnown RBP20.94■□□□□ 0.94
PRDM15-201ENST00000269844 TRIM41Q8WV44 630 aa20.92■□□□□ 0.94
PRDM15-201ENST00000269844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.91■□□□□ 0.94
PRDM15-201ENST00000269844 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
PRDM15-201ENST00000269844 ANP32EQ9BTT0 268 aa20.78■□□□□ 0.92
PRDM15-201ENST00000269844 CDK11AQ9UQ88 783 aaPredicted RBP20.71■□□□□ 0.91
PRDM15-201ENST00000269844 GLIPR1L2Q4G1C9 344 aa20.7■□□□□ 0.9
PRDM15-201ENST00000269844 MYT1LQ9UL68 1186 aa20.7■□□□□ 0.9
PRDM15-201ENST00000269844 CLSPNQ9HAW4 1339 aa20.59■□□□□ 0.89
PRDM15-201ENST00000269844 ATP1B4Q9UN42 357 aaPredicted RBP20.59■□□□□ 0.89
PRDM15-201ENST00000269844 ZNF316A6NFI3 1004 aaPredicted RBP20.59■□□□□ 0.89
PRDM15-201ENST00000269844 RANGAP1P46060 587 aaPredicted RBP20.52■□□□□ 0.88
PRDM15-201ENST00000269844 UBTFP17480 764 aaKnown RBP20.48■□□□□ 0.87
PRDM15-201ENST00000269844 HNRNPUL2Q1KMD3 747 aaKnown RBP20.45■□□□□ 0.86
PRDM15-201ENST00000269844 FKBP8Q14318 412 aa20.37■□□□□ 0.85
PRDM15-201ENST00000269844 NBR1Q14596 966 aa20.37■□□□□ 0.85
PRDM15-201ENST00000269844 ANP32AP39687 249 aaKnown RBP20.36■□□□□ 0.85
PRDM15-201ENST00000269844 CSRNP3Q8WYN3 585 aa20.18■□□□□ 0.82
PRDM15-201ENST00000269844 RTN4Q9NQC3 1192 aaKnown RBP20.12■□□□□ 0.81
PRDM15-201ENST00000269844 NPM2Q86SE8 214 aaKnown RBP20.12■□□□□ 0.81
PRDM15-201ENST00000269844 ITGAEP38570 1179 aa20.1■□□□□ 0.81
PRDM15-201ENST00000269844 CNGB1Q14028 1251 aaPredicted RBP20.09■□□□□ 0.81
PRDM15-201ENST00000269844 ANP32CO43423 234 aa20.08■□□□□ 0.81
PRDM15-201ENST00000269844 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
PRDM15-201ENST00000269844 MIER1Q8N108 512 aa20.06■□□□□ 0.8
PRDM15-201ENST00000269844 ZBTB47Q9UFB7 747 aaPredicted RBP20.06■□□□□ 0.8
PRDM15-201ENST00000269844 PRKCSHP14314 528 aaPredicted RBP20.05■□□□□ 0.8
PRDM15-201ENST00000269844 POLR3GLQ9BT43 218 aa20.03■□□□□ 0.8
PRDM15-201ENST00000269844 DEKP35659 375 aaKnown RBP19.97■□□□□ 0.79
PRDM15-201ENST00000269844 SUPT16HQ9Y5B9 1047 aaKnown RBP19.91■□□□□ 0.78
PRDM15-201ENST00000269844 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.86■□□□□ 0.77
PRDM15-201ENST00000269844 NEFMP07197 916 aa19.79■□□□□ 0.76
PRDM15-201ENST00000269844 TRIM52Q96A61 297 aa19.76■□□□□ 0.75
PRDM15-201ENST00000269844 ERICH6BQ5W0A0 696 aa19.76■□□□□ 0.75
PRDM15-201ENST00000269844 TSHZ2Q9NRE2 1034 aa19.75■□□□□ 0.75
PRDM15-201ENST00000269844 RBM19Q9Y4C8 960 aaKnown RBP19.75■□□□□ 0.75
PRDM15-201ENST00000269844 CCDC136Q96JN2 1154 aa19.74■□□□□ 0.75
PRDM15-201ENST00000269844 ARXQ96QS3 562 aa19.73■□□□□ 0.75
PRDM15-201ENST00000269844 ANP32BQ92688 251 aaKnown RBP19.72■□□□□ 0.75
PRDM15-201ENST00000269844 HNRNPUQ00839 825 aaKnown RBP eCLIP19.72■□□□□ 0.75
PRDM15-201ENST00000269844 IRX6P78412 446 aaPredicted RBP19.71■□□□□ 0.75
PRDM15-201ENST00000269844 NOP58Q9Y2X3 529 aaKnown RBP19.68■□□□□ 0.74
PRDM15-201ENST00000269844 NAP1L5Q96NT1 182 aaPredicted RBP19.66■□□□□ 0.74
PRDM15-201ENST00000269844 DDX10Q13206 875 aaKnown RBP19.6■□□□□ 0.73
PRDM15-201ENST00000269844 TNNT2P45379 298 aaPredicted RBP19.59■□□□□ 0.73
PRDM15-201ENST00000269844 SLC4A1APQ9BWU0 796 aaKnown RBP19.56■□□□□ 0.72
PRDM15-201ENST00000269844 PPM1GO15355 546 aaPredicted RBP19.55■□□□□ 0.72
PRDM15-201ENST00000269844 CCDC180Q9P1Z9 1646 aa19.54■□□□□ 0.72
PRDM15-201ENST00000269844 LAS1LQ9Y4W2 734 aaKnown RBP19.52■□□□□ 0.72
PRDM15-201ENST00000269844 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
PRDM15-201ENST00000269844 TRIM44Q96DX7 344 aaPredicted RBP19.46■□□□□ 0.71
PRDM15-201ENST00000269844 ANO8Q9HCE9 1232 aaPredicted RBP19.46■□□□□ 0.71
PRDM15-201ENST00000269844 DDRGK1Q96HY6 314 aa19.44■□□□□ 0.7
PRDM15-201ENST00000269844 VSIG10Q8N0Z9 540 aa19.42■□□□□ 0.7
PRDM15-201ENST00000269844 FAM9BQ8IZU0 186 aa19.41■□□□□ 0.7
PRDM15-201ENST00000269844 CDK11BP21127 795 aaKnown RBP19.4■□□□□ 0.7
PRDM15-201ENST00000269844 HSP90AA1P07900 732 aaKnown RBP19.38■□□□□ 0.69
PRDM15-201ENST00000269844 FAM50AQ14320 339 aaKnown RBP19.38■□□□□ 0.69
PRDM15-201ENST00000269844 UPF2Q9HAU5 1272 aaKnown RBP19.36■□□□□ 0.69
PRDM15-201ENST00000269844 PKNOX2Q96KN3 472 aa19.36■□□□□ 0.69
PRDM15-201ENST00000269844 PPP4R2Q9NY27 417 aa19.33■□□□□ 0.68
PRDM15-201ENST00000269844 CANXP27824 592 aaKnown RBP19.3■□□□□ 0.68
PRDM15-201ENST00000269844 NCLP19338 710 aaKnown RBP19.28■□□□□ 0.68
PRDM15-201ENST00000269844 ARID4BQ4LE39 1312 aaPredicted RBP19.28■□□□□ 0.68
PRDM15-201ENST00000269844 AMER1Q5JTC6 1135 aaPredicted RBP19.26■□□□□ 0.67
PRDM15-201ENST00000269844 RSPH6AQ9H0K4 717 aa19.26■□□□□ 0.67
PRDM15-201ENST00000269844 PODXL2Q9NZ53 605 aa19.26■□□□□ 0.67
PRDM15-201ENST00000269844 HSP90AA2PQ14568 343 aaPredicted RBP19.22■□□□□ 0.67
PRDM15-201ENST00000269844 SALL2Q9Y467 1007 aaPredicted RBP19.21■□□□□ 0.67
PRDM15-201ENST00000269844 B4GALNT3Q6L9W6 998 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms