RNA–Protein interactions for RNA: ENST00000570262.5

CDH16-209, Transcript of cadherin 16, humanhuman

TSL 5 BASIC

Gene CDH16, Length 2,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-209ENST00000570262 NISCHQ9Y2I1 1504 aa29.12■■■□□ 2.25
CDH16-209ENST00000570262 SHROOM4Q9ULL8 1493 aa25.15■■□□□ 1.62
CDH16-209ENST00000570262 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
CDH16-209ENST00000570262 ZCCHC6Q5VYS8 1495 aaKnown RBP24.72■■□□□ 1.55
CDH16-209ENST00000570262 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
CDH16-209ENST00000570262 MYO15BQ96JP2 1530 aa24.36■■□□□ 1.49
CDH16-209ENST00000570262 CHIC1Q5VXU3 224 aa24.3■■□□□ 1.48
CDH16-209ENST00000570262 HRCP23327 699 aa24.17■■□□□ 1.46
CDH16-209ENST00000570262 DCAF8L2P0C7V8 631 aa24.05■■□□□ 1.44
CDH16-209ENST00000570262 PCGF6Q9BYE7 350 aa23.92■■□□□ 1.42
CDH16-209ENST00000570262 DCAF1Q9Y4B6 1507 aa23.85■■□□□ 1.41
CDH16-209ENST00000570262 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
CDH16-209ENST00000570262 LOC105371045A0A1W2PR82 267 aa23.62■■□□□ 1.37
CDH16-209ENST00000570262 ABCC9O60706 1549 aa23.39■■□□□ 1.34
CDH16-209ENST00000570262 TRIM26Q12899 539 aaPredicted RBP23.34■■□□□ 1.33
CDH16-209ENST00000570262 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
CDH16-209ENST00000570262 SCRIBQ14160 1630 aa23.13■■□□□ 1.29
CDH16-209ENST00000570262 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
CDH16-209ENST00000570262 RB1CC1Q8TDY2 1594 aa23.04■■□□□ 1.28
CDH16-209ENST00000570262 ZEB1P37275 1124 aaPredicted RBP22.95■■□□□ 1.26
CDH16-209ENST00000570262 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
CDH16-209ENST00000570262 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
CDH16-209ENST00000570262 EHMT2Q96KQ7 1210 aa22.74■■□□□ 1.23
CDH16-209ENST00000570262 PELP1Q8IZL8 1130 aaKnown RBP22.69■■□□□ 1.22
CDH16-209ENST00000570262 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
CDH16-209ENST00000570262 NACADO15069 1562 aa22.6■■□□□ 1.21
CDH16-209ENST00000570262 WIZO95785 1651 aa22.58■■□□□ 1.21
CDH16-209ENST00000570262 SCAF1Q9H7N4 1312 aaKnown RBP22.52■■□□□ 1.2
CDH16-209ENST00000570262 EIF4G1Q04637 1599 aaKnown RBP22.45■■□□□ 1.18
CDH16-209ENST00000570262 BAZ1AQ9NRL2 1556 aaPredicted RBP22.45■■□□□ 1.18
CDH16-209ENST00000570262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.17
CDH16-209ENST00000570262 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
CDH16-209ENST00000570262 ABCC8Q09428 1581 aa22.23■■□□□ 1.15
CDH16-209ENST00000570262 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
CDH16-209ENST00000570262 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.14
CDH16-209ENST00000570262 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
CDH16-209ENST00000570262 ACIN1Q9UKV3 1341 aaKnown RBP22.15■■□□□ 1.14
CDH16-209ENST00000570262 CEP162Q5TB80 1403 aa22.14■■□□□ 1.14
CDH16-209ENST00000570262 NEUROD1Q13562 356 aa22.12■■□□□ 1.13
CDH16-209ENST00000570262 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
CDH16-209ENST00000570262 TTBK1Q5TCY1 1321 aaPredicted RBP22.1■■□□□ 1.13
CDH16-209ENST00000570262 SMARCA4P51532 1647 aa22.1■■□□□ 1.13
CDH16-209ENST00000570262 SOGA1O94964 1423 aa22.09■■□□□ 1.13
CDH16-209ENST00000570262 DIEXFQ68CQ4 756 aaKnown RBP22.08■■□□□ 1.13
CDH16-209ENST00000570262 TNIKQ9UKE5 1360 aa22.06■■□□□ 1.12
CDH16-209ENST00000570262 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
CDH16-209ENST00000570262 EEA1Q15075 1411 aa21.96■■□□□ 1.11
CDH16-209ENST00000570262 CSRNP3Q8WYN3 585 aa21.95■■□□□ 1.11
CDH16-209ENST00000570262 CENPBP07199 599 aaPredicted RBP21.92■■□□□ 1.1
CDH16-209ENST00000570262 GTF3C3Q9Y5Q9 886 aa21.92■■□□□ 1.1
CDH16-209ENST00000570262 UNC13AQ9UPW8 1703 aa21.91■■□□□ 1.1
CDH16-209ENST00000570262 UBTFP17480 764 aaKnown RBP21.9■■□□□ 1.1
CDH16-209ENST00000570262 GOLGA3Q08378 1498 aa21.86■■□□□ 1.09
CDH16-209ENST00000570262 ZNF316A6NFI3 1004 aaPredicted RBP21.81■■□□□ 1.08
CDH16-209ENST00000570262 MYT1Q01538 1121 aa21.79■■□□□ 1.08
CDH16-209ENST00000570262 CEP164Q9UPV0 1460 aa21.69■■□□□ 1.06
CDH16-209ENST00000570262 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
CDH16-209ENST00000570262 KIF21BO75037 1637 aa21.67■■□□□ 1.06
CDH16-209ENST00000570262 HNRNPUL2Q1KMD3 747 aaKnown RBP21.66■■□□□ 1.06
CDH16-209ENST00000570262 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
CDH16-209ENST00000570262 CLIP1P30622 1438 aa21.64■■□□□ 1.05
CDH16-209ENST00000570262 PABPN1Q86U42 306 aaKnown RBP eCLIP21.61■■□□□ 1.05
CDH16-209ENST00000570262 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
CDH16-209ENST00000570262 YTHDC1Q96MU7 727 aaKnown RBP21.6■■□□□ 1.05
CDH16-209ENST00000570262 VPS8Q8N3P4 1428 aa21.6■■□□□ 1.05
CDH16-209ENST00000570262 MIER1Q8N108 512 aa21.58■■□□□ 1.05
CDH16-209ENST00000570262 RAPGEF2Q9Y4G8 1499 aa21.53■■□□□ 1.04
CDH16-209ENST00000570262 BAZ1BQ9UIG0 1483 aaKnown RBP21.53■■□□□ 1.04
CDH16-209ENST00000570262 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.03
CDH16-209ENST00000570262 APLP2Q06481 763 aa21.45■■□□□ 1.02
CDH16-209ENST00000570262 RANGAP1P46060 587 aaPredicted RBP21.41■■□□□ 1.02
CDH16-209ENST00000570262 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
CDH16-209ENST00000570262 DHX57Q6P158 1386 aaKnown RBP21.31■■□□□ 1
CDH16-209ENST00000570262 CLSPNQ9HAW4 1339 aa21.29■■□□□ 1
CDH16-209ENST00000570262 ARAP1Q96P48 1450 aa21.27■■□□□ 1
CDH16-209ENST00000570262 PRXQ9BXM0 1461 aa21.26■□□□□ 0.99
CDH16-209ENST00000570262 ERICH3Q5RHP9 1530 aa21.26■□□□□ 0.99
CDH16-209ENST00000570262 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
CDH16-209ENST00000570262 KANK4Q5T7N3 995 aaPredicted RBP21.23■□□□□ 0.99
CDH16-209ENST00000570262 RRBP1Q9P2E9 1410 aaKnown RBP21.16■□□□□ 0.98
CDH16-209ENST00000570262 CUX2O14529 1486 aa21.09■□□□□ 0.97
CDH16-209ENST00000570262 CUX1P39880 1505 aa21.08■□□□□ 0.97
CDH16-209ENST00000570262 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
CDH16-209ENST00000570262 CCNB3Q8WWL7 1395 aa21.04■□□□□ 0.96
CDH16-209ENST00000570262 SUPT16HQ9Y5B9 1047 aaKnown RBP21.04■□□□□ 0.96
CDH16-209ENST00000570262 ARHGAP35Q9NRY4 1499 aa21.03■□□□□ 0.96
CDH16-209ENST00000570262 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
CDH16-209ENST00000570262 NCAPD3P42695 1498 aa20.95■□□□□ 0.94
CDH16-209ENST00000570262 ITGAEP38570 1179 aa20.94■□□□□ 0.94
CDH16-209ENST00000570262 MAPKBP1O60336 1514 aa20.91■□□□□ 0.94
CDH16-209ENST00000570262 RAB3GAP2Q9H2M9 1393 aa20.91■□□□□ 0.94
CDH16-209ENST00000570262 CFTRP13569 1480 aa20.9■□□□□ 0.94
CDH16-209ENST00000570262 KCNH8Q96L42 1107 aa20.86■□□□□ 0.93
CDH16-209ENST00000570262 TIAM1Q13009 1591 aa20.85■□□□□ 0.93
CDH16-209ENST00000570262 IGF1RP08069 1367 aa20.81■□□□□ 0.92
CDH16-209ENST00000570262 MAP3K1Q13233 1512 aa20.81■□□□□ 0.92
CDH16-209ENST00000570262 TSHZ2Q9NRE2 1034 aa20.78■□□□□ 0.92
CDH16-209ENST00000570262 SETD5Q9C0A6 1442 aa20.78■□□□□ 0.92
CDH16-209ENST00000570262 LRRC9Q6ZRR7 1453 aa20.77■□□□□ 0.92
CDH16-209ENST00000570262 PHLDB1Q86UU1 1377 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms