RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 NISCHQ9Y2I1 1504 aa40.37■■■■■ 4.05
CLPP-201ENST00000245816 CCDC180Q9P1Z9 1646 aa36.01■■■■□ 3.35
CLPP-201ENST00000245816 ABCC9O60706 1549 aa35.92■■■■□ 3.34
CLPP-201ENST00000245816 RB1CC1Q8TDY2 1594 aa34.15■■■■□ 3.06
CLPP-201ENST00000245816 NACADO15069 1562 aa34■■■■□ 3.03
CLPP-201ENST00000245816 DCAF8L2P0C7V8 631 aa33.9■■■■□ 3.02
CLPP-201ENST00000245816 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
CLPP-201ENST00000245816 MYO15BQ96JP2 1530 aa33.63■■■□□ 2.97
CLPP-201ENST00000245816 PABPN1Q86U42 306 aaKnown RBP eCLIP33.53■■■□□ 2.96
CLPP-201ENST00000245816 UNC13AQ9UPW8 1703 aa33.53■■■□□ 2.96
CLPP-201ENST00000245816 ZCCHC6Q5VYS8 1495 aaKnown RBP33.5■■■□□ 2.95
CLPP-201ENST00000245816 BICRAQ9NZM4 1560 aa33.37■■■□□ 2.93
CLPP-201ENST00000245816 DCAF1Q9Y4B6 1507 aa33.3■■■□□ 2.92
CLPP-201ENST00000245816 SCRIBQ14160 1630 aa32.91■■■□□ 2.86
CLPP-201ENST00000245816 SHROOM4Q9ULL8 1493 aa32.68■■■□□ 2.82
CLPP-201ENST00000245816 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
CLPP-201ENST00000245816 EIF4G1Q04637 1599 aaKnown RBP32.42■■■□□ 2.78
CLPP-201ENST00000245816 CECR2Q9BXF3 1484 aa32.29■■■□□ 2.76
CLPP-201ENST00000245816 NCAPD3P42695 1498 aa31.47■■■□□ 2.63
CLPP-201ENST00000245816 ATAD2BQ9ULI0 1458 aa31.43■■■□□ 2.62
CLPP-201ENST00000245816 SMARCA4P51532 1647 aa31.42■■■□□ 2.62
CLPP-201ENST00000245816 SMARCA2P51531 1590 aa31.22■■■□□ 2.59
CLPP-201ENST00000245816 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
CLPP-201ENST00000245816 HMGXB3Q12766 1538 aa31.19■■■□□ 2.58
CLPP-201ENST00000245816 MROH2BQ7Z745 1585 aa31.17■■■□□ 2.58
CLPP-201ENST00000245816 PEG3Q9GZU2 1588 aa31.12■■■□□ 2.57
CLPP-201ENST00000245816 BAZ1BQ9UIG0 1483 aaKnown RBP31.03■■■□□ 2.56
CLPP-201ENST00000245816 NESP48681 1621 aa31■■■□□ 2.55
CLPP-201ENST00000245816 ERCC6Q03468 1493 aa30.84■■■□□ 2.53
CLPP-201ENST00000245816 WIZO95785 1651 aa30.78■■■□□ 2.52
CLPP-201ENST00000245816 CUX2O14529 1486 aa30.75■■■□□ 2.51
CLPP-201ENST00000245816 LAMC3Q9Y6N6 1575 aa30.63■■■□□ 2.49
CLPP-201ENST00000245816 DNAJC5Q9H3Z4 198 aa30.61■■■□□ 2.49
CLPP-201ENST00000245816 RSF1Q96T23 1441 aaPredicted RBP30.59■■■□□ 2.49
CLPP-201ENST00000245816 THOC2Q8NI27 1593 aaKnown RBP30.57■■■□□ 2.48
CLPP-201ENST00000245816 KIF21AQ7Z4S6 1674 aa30.52■■■□□ 2.48
CLPP-201ENST00000245816 CADPSQ9ULU8 1353 aa30.51■■■□□ 2.47
CLPP-201ENST00000245816 PDS5BQ9NTI5 1447 aa30.43■■■□□ 2.46
CLPP-201ENST00000245816 TOP2AP11388 1531 aaKnown RBP30.33■■■□□ 2.45
CLPP-201ENST00000245816 CFTRP13569 1480 aa30.23■■■□□ 2.43
CLPP-201ENST00000245816 MRC2Q9UBG0 1479 aa30.21■■■□□ 2.43
CLPP-201ENST00000245816 WDR62O43379 1518 aa30.16■■■□□ 2.42
CLPP-201ENST00000245816 FANCD2Q9BXW9 1451 aa30.14■■■□□ 2.42
CLPP-201ENST00000245816 CEP164Q9UPV0 1460 aa30.1■■■□□ 2.41
CLPP-201ENST00000245816 CCDC88BA6NC98 1476 aa30.07■■■□□ 2.4
CLPP-201ENST00000245816 URB2Q14146 1524 aaKnown RBP29.97■■■□□ 2.39
CLPP-201ENST00000245816 PRDM2Q13029 1718 aa29.82■■■□□ 2.36
CLPP-201ENST00000245816 TOPBP1Q92547 1522 aa29.63■■■□□ 2.33
CLPP-201ENST00000245816 ZNF608Q9ULD9 1512 aaPredicted RBP29.59■■■□□ 2.33
CLPP-201ENST00000245816 IFT140Q96RY7 1462 aa29.5■■■□□ 2.31
CLPP-201ENST00000245816 DNMBPQ6XZF7 1577 aa29.49■■■□□ 2.31
CLPP-201ENST00000245816 ABCC8Q09428 1581 aa29.43■■■□□ 2.3
CLPP-201ENST00000245816 OSCARQ8IYS5 282 aa29.4■■■□□ 2.3
CLPP-201ENST00000245816 TARBP1Q13395 1621 aaKnown RBP29.38■■■□□ 2.29
CLPP-201ENST00000245816 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
CLPP-201ENST00000245816 SUPT5HO00267 1087 aaKnown RBP29.34■■■□□ 2.29
CLPP-201ENST00000245816 EIF4G3O43432 1585 aaKnown RBP29.33■■■□□ 2.29
CLPP-201ENST00000245816 AQRO60306 1485 aaKnown RBP eCLIP29.32■■■□□ 2.286e-7■■■□□ 19.1
CLPP-201ENST00000245816 RAD54L2Q9Y4B4 1467 aa29.29■■■□□ 2.28
CLPP-201ENST00000245816 TRIM41Q8WV44 630 aa29.29■■■□□ 2.28
CLPP-201ENST00000245816 CUX1P39880 1505 aa29.25■■■□□ 2.27
CLPP-201ENST00000245816 SOGA1O94964 1423 aa29.19■■■□□ 2.26
CLPP-201ENST00000245816 FGD5Q6ZNL6 1462 aa29.18■■■□□ 2.26
CLPP-201ENST00000245816 TDRD9Q8NDG6 1382 aaKnown RBP29.16■■■□□ 2.26
CLPP-201ENST00000245816 RIMBP3CA6NJZ7 1639 aa29.07■■■□□ 2.24
CLPP-201ENST00000245816 RIMBP3BA6NNM3 1639 aa29.07■■■□□ 2.24
CLPP-201ENST00000245816 CHD1O14646 1710 aa29.07■■■□□ 2.24
CLPP-201ENST00000245816 RIMBP3Q9UFD9 1639 aa29.07■■■□□ 2.24
CLPP-201ENST00000245816 ARHGEF11O15085 1522 aa28.99■■■□□ 2.23
CLPP-201ENST00000245816 WDR97A6NE52 1622 aa28.98■■■□□ 2.23
CLPP-201ENST00000245816 SNAPC4Q5SXM2 1469 aa28.97■■■□□ 2.23
CLPP-201ENST00000245816 FBLN2P98095 1184 aa28.95■■■□□ 2.22
CLPP-201ENST00000245816 GRIN2BQ13224 1484 aa28.87■■■□□ 2.21
CLPP-201ENST00000245816 ABCA10Q8WWZ4 1543 aa28.85■■■□□ 2.21
CLPP-201ENST00000245816 GAPVD1Q14C86 1478 aa28.82■■■□□ 2.2
CLPP-201ENST00000245816 MAGI1Q96QZ7 1491 aaPredicted RBP28.82■■■□□ 2.2
CLPP-201ENST00000245816 SYNJ1O43426 1573 aa28.81■■■□□ 2.2
CLPP-201ENST00000245816 ABCA5Q8WWZ7 1642 aa28.8■■■□□ 2.2
CLPP-201ENST00000245816 CLASP1Q7Z460 1538 aa28.79■■■□□ 2.2
CLPP-201ENST00000245816 PBRM1Q86U86 1689 aa28.77■■■□□ 2.2
CLPP-201ENST00000245816 BIVM-ERCC5R4GMW8 1640 aa28.77■■■□□ 2.2
CLPP-201ENST00000245816 ARAP1Q96P48 1450 aa28.77■■■□□ 2.2
CLPP-201ENST00000245816 TOP2BQ02880 1626 aa28.76■■■□□ 2.2
CLPP-201ENST00000245816 CYB5RLQ6IPT4 315 aa28.76■■■□□ 2.19
CLPP-201ENST00000245816 CHMP7Q8WUX9 453 aaPredicted RBP28.76■■■□□ 2.19
CLPP-201ENST00000245816 SYNJ2O15056 1496 aa28.76■■■□□ 2.19
CLPP-201ENST00000245816 WRNQ14191 1432 aaPredicted RBP eCLIP28.76■■■□□ 2.19
CLPP-201ENST00000245816 ADAMTS12P58397 1594 aa28.55■■■□□ 2.16
CLPP-201ENST00000245816 GRIN2AQ12879 1464 aa28.53■■■□□ 2.16
CLPP-201ENST00000245816 CEP170Q5SW79 1584 aa28.48■■■□□ 2.15
CLPP-201ENST00000245816 ERCC6L2Q5T890 1561 aa28.46■■■□□ 2.15
CLPP-201ENST00000245816 NUP160Q12769 1436 aa28.46■■■□□ 2.15
CLPP-201ENST00000245816 FHAD1B1AJZ9 1412 aa28.44■■■□□ 2.14
CLPP-201ENST00000245816 ERICH3Q5RHP9 1530 aa28.44■■■□□ 2.14
CLPP-201ENST00000245816 SHROOM2Q13796 1616 aa28.31■■■□□ 2.12
CLPP-201ENST00000245816 TRHP20396 242 aaPredicted RBP28.27■■■□□ 2.12
CLPP-201ENST00000245816 IGF1RP08069 1367 aa28.26■■■□□ 2.12
CLPP-201ENST00000245816 RUSC2Q8N2Y8 1516 aa28.15■■■□□ 2.1
CLPP-201ENST00000245816 JPH4Q96JJ6 628 aa28.15■■■□□ 2.1
CLPP-201ENST00000245816 KIF27Q86VH2 1401 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms