Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.52□□□□□ -0.25
ACTA1P68133 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.52□□□□□ -0.25
ACTA1P68133 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.52□□□□□ -0.25
ACTA1P68133 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.52□□□□□ -0.25
ACTA1P68133 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.52□□□□□ -0.25
ACTA1P68133 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ACTA1P68133 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.52□□□□□ -0.25
ACTA1P68133 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.52□□□□□ -0.25
ACTA1P68133 AC093520.2-201ENST00000561830 333 ntBASIC13.52□□□□□ -0.25
ACTA1P68133 MIR4453-201ENST00000584019 89 ntBASIC13.52□□□□□ -0.25
ACTA1P68133 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.52□□□□□ -0.25
ACTA1P68133 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.52□□□□□ -0.25
ACTA1P68133 LINC01115-203ENST00000606068 577 ntBASIC13.52□□□□□ -0.25
ACTA1P68133 AC009093.7-201ENST00000623853 1223 ntBASIC13.52□□□□□ -0.25
ACTA1P68133 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.52□□□□□ -0.25
ACTA1P68133 AF228730.6-201ENST00000641497 218 ntBASIC13.52□□□□□ -0.25
ACTA1P68133 AC084121.3-201ENST00000641716 218 ntBASIC13.52□□□□□ -0.25
ACTA1P68133 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.52□□□□□ -0.25
ACTA1P68133 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.52□□□□□ -0.25
ACTA1P68133 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.52□□□□□ -0.25
ACTA1P68133 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.52□□□□□ -0.25
ACTA1P68133 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.52□□□□□ -0.25
ACTA1P68133 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.52□□□□□ -0.25
ACTA1P68133 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ACTA1P68133 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.52□□□□□ -0.25
ACTA1P68133 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACTA1P68133 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ACTA1P68133 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
ACTA1P68133 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.51□□□□□ -0.25
ACTA1P68133 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.51□□□□□ -0.25
ACTA1P68133 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.51□□□□□ -0.25
ACTA1P68133 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.51□□□□□ -0.25
ACTA1P68133 AC011474.4-201ENST00000623523 2076 ntBASIC13.51□□□□□ -0.25
ACTA1P68133 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.51□□□□□ -0.25
ACTA1P68133 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ACTA1P68133 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.51□□□□□ -0.25
ACTA1P68133 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ACTA1P68133 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ACTA1P68133 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.51□□□□□ -0.25
ACTA1P68133 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.51□□□□□ -0.25
ACTA1P68133 AC004461.1-201ENST00000412461 403 ntBASIC13.51□□□□□ -0.25
ACTA1P68133 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.51□□□□□ -0.25
ACTA1P68133 AP000344.2-201ENST00000512987 629 ntBASIC13.51□□□□□ -0.25
ACTA1P68133 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.51□□□□□ -0.25
ACTA1P68133 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.51□□□□□ -0.25
ACTA1P68133 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.51□□□□□ -0.25
ACTA1P68133 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
ACTA1P68133 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.51□□□□□ -0.25
ACTA1P68133 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.51□□□□□ -0.25
ACTA1P68133 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.51□□□□□ -0.25
ACTA1P68133 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.51□□□□□ -0.25
ACTA1P68133 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ACTA1P68133 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.51□□□□□ -0.25
ACTA1P68133 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.51□□□□□ -0.25
ACTA1P68133 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ACTA1P68133 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.51□□□□□ -0.25
ACTA1P68133 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ACTA1P68133 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.5□□□□□ -0.25
ACTA1P68133 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ACTA1P68133 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.5□□□□□ -0.25
ACTA1P68133 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ACTA1P68133 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ACTA1P68133 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms