RNA–Protein interactions for RNA: ENST00000540558.1

RHBDL2-203, Transcript of rhomboid like 2, humanhuman

TSL 1 (best) BASIC

Gene RHBDL2, Length 697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL2-203ENST00000540558 NISCHQ9Y2I1 1504 aa38.24■■■■□ 3.71
RHBDL2-203ENST00000540558 CCDC180Q9P1Z9 1646 aa33.97■■■■□ 3.03
RHBDL2-203ENST00000540558 ABCC9O60706 1549 aa33.16■■■□□ 2.9
RHBDL2-203ENST00000540558 DCAF8L2P0C7V8 631 aa32.09■■■□□ 2.73
RHBDL2-203ENST00000540558 RB1CC1Q8TDY2 1594 aa31.92■■■□□ 2.7
RHBDL2-203ENST00000540558 NACADO15069 1562 aa31.88■■■□□ 2.69
RHBDL2-203ENST00000540558 ZCCHC6Q5VYS8 1495 aaKnown RBP31.86■■■□□ 2.69
RHBDL2-203ENST00000540558 MYO15BQ96JP2 1530 aa31.64■■■□□ 2.66
RHBDL2-203ENST00000540558 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
RHBDL2-203ENST00000540558 UNC13AQ9UPW8 1703 aa31.28■■■□□ 2.6
RHBDL2-203ENST00000540558 SCRIBQ14160 1630 aa31.07■■■□□ 2.56
RHBDL2-203ENST00000540558 PABPN1Q86U42 306 aaKnown RBP eCLIP31.02■■■□□ 2.56
RHBDL2-203ENST00000540558 BICRAQ9NZM4 1560 aa30.91■■■□□ 2.54
RHBDL2-203ENST00000540558 SHROOM4Q9ULL8 1493 aa30.51■■■□□ 2.48
RHBDL2-203ENST00000540558 DNAJC5BQ9UF47 199 aa30.26■■■□□ 2.43
RHBDL2-203ENST00000540558 EIF4G1Q04637 1599 aaKnown RBP30.1■■■□□ 2.41
RHBDL2-203ENST00000540558 CC2D2AQ9P2K1 1620 aa29.98■■■□□ 2.39
RHBDL2-203ENST00000540558 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
RHBDL2-203ENST00000540558 SMARCA4P51532 1647 aa29.68■■■□□ 2.34
RHBDL2-203ENST00000540558 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.34
RHBDL2-203ENST00000540558 MROH2BQ7Z745 1585 aa29.5■■■□□ 2.31
RHBDL2-203ENST00000540558 ATAD2BQ9ULI0 1458 aa29.44■■■□□ 2.3
RHBDL2-203ENST00000540558 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
RHBDL2-203ENST00000540558 NCAPD3P42695 1498 aa29.37■■■□□ 2.29
RHBDL2-203ENST00000540558 PEG3Q9GZU2 1588 aa29.3■■■□□ 2.28
RHBDL2-203ENST00000540558 HMGXB3Q12766 1538 aa29.26■■■□□ 2.27
RHBDL2-203ENST00000540558 WIZO95785 1651 aa29.26■■■□□ 2.27
RHBDL2-203ENST00000540558 BAZ1BQ9UIG0 1483 aaKnown RBP29.25■■■□□ 2.27
RHBDL2-203ENST00000540558 RSF1Q96T23 1441 aaPredicted RBP29.19■■■□□ 2.26
RHBDL2-203ENST00000540558 TOP2AP11388 1531 aaKnown RBP28.89■■■□□ 2.21
RHBDL2-203ENST00000540558 NESP48681 1621 aa28.72■■■□□ 2.19
RHBDL2-203ENST00000540558 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
RHBDL2-203ENST00000540558 LAMC3Q9Y6N6 1575 aa28.63■■■□□ 2.17
RHBDL2-203ENST00000540558 ERCC6Q03468 1493 aa28.59■■■□□ 2.17
RHBDL2-203ENST00000540558 CADPSQ9ULU8 1353 aa28.56■■■□□ 2.16
RHBDL2-203ENST00000540558 CCDC88BA6NC98 1476 aa28.55■■■□□ 2.16
RHBDL2-203ENST00000540558 KIF21AQ7Z4S6 1674 aa28.44■■■□□ 2.14
RHBDL2-203ENST00000540558 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
RHBDL2-203ENST00000540558 CFTRP13569 1480 aa28.4■■■□□ 2.14
RHBDL2-203ENST00000540558 PRDM2Q13029 1718 aa28.33■■■□□ 2.13
RHBDL2-203ENST00000540558 FANCD2Q9BXW9 1451 aa28.27■■■□□ 2.12
RHBDL2-203ENST00000540558 CEP164Q9UPV0 1460 aa28.22■■■□□ 2.11
RHBDL2-203ENST00000540558 THOC2Q8NI27 1593 aaKnown RBP28.22■■■□□ 2.11
RHBDL2-203ENST00000540558 CUX2O14529 1486 aa28.14■■■□□ 2.09
RHBDL2-203ENST00000540558 MRC2Q9UBG0 1479 aa28.14■■■□□ 2.09
RHBDL2-203ENST00000540558 WDR62O43379 1518 aa28.02■■■□□ 2.08
RHBDL2-203ENST00000540558 URB2Q14146 1524 aaKnown RBP27.96■■■□□ 2.07
RHBDL2-203ENST00000540558 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
RHBDL2-203ENST00000540558 ABCC8Q09428 1581 aa27.82■■■□□ 2.04
RHBDL2-203ENST00000540558 DNMBPQ6XZF7 1577 aa27.81■■■□□ 2.04
RHBDL2-203ENST00000540558 CUX1P39880 1505 aa27.67■■■□□ 2.02
RHBDL2-203ENST00000540558 IFT140Q96RY7 1462 aa27.6■■■□□ 2.01
RHBDL2-203ENST00000540558 POLA1P09884 1462 aaPredicted RBP27.58■■■□□ 2.01
RHBDL2-203ENST00000540558 FGD5Q6ZNL6 1462 aa27.57■■■□□ 2
RHBDL2-203ENST00000540558 WRNQ14191 1432 aaPredicted RBP eCLIP27.55■■■□□ 2
RHBDL2-203ENST00000540558 SOGA1O94964 1423 aa27.51■■□□□ 1.99
RHBDL2-203ENST00000540558 RAD54L2Q9Y4B4 1467 aa27.51■■□□□ 1.99
RHBDL2-203ENST00000540558 TARBP1Q13395 1621 aaKnown RBP27.5■■□□□ 1.99
RHBDL2-203ENST00000540558 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
RHBDL2-203ENST00000540558 ZNF608Q9ULD9 1512 aaPredicted RBP27.48■■□□□ 1.99
RHBDL2-203ENST00000540558 BIVM-ERCC5R4GMW8 1640 aa27.48■■□□□ 1.99
RHBDL2-203ENST00000540558 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
RHBDL2-203ENST00000540558 EIF4G3O43432 1585 aaKnown RBP27.4■■□□□ 1.98
RHBDL2-203ENST00000540558 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.97
RHBDL2-203ENST00000540558 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
RHBDL2-203ENST00000540558 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
RHBDL2-203ENST00000540558 ABCA10Q8WWZ4 1543 aa27.26■■□□□ 1.96
RHBDL2-203ENST00000540558 PBRM1Q86U86 1689 aa27.19■■□□□ 1.94
RHBDL2-203ENST00000540558 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
RHBDL2-203ENST00000540558 ABCA5Q8WWZ7 1642 aa27.16■■□□□ 1.94
RHBDL2-203ENST00000540558 GRIN2BQ13224 1484 aa27.15■■□□□ 1.94
RHBDL2-203ENST00000540558 DNAJC5Q9H3Z4 198 aa27.13■■□□□ 1.93
RHBDL2-203ENST00000540558 FBLN2P98095 1184 aa27.11■■□□□ 1.93
RHBDL2-203ENST00000540558 SNAPC4Q5SXM2 1469 aa27.11■■□□□ 1.93
RHBDL2-203ENST00000540558 CHD1O14646 1710 aa27.1■■□□□ 1.93
RHBDL2-203ENST00000540558 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
RHBDL2-203ENST00000540558 OSCARQ8IYS5 282 aa27.06■■□□□ 1.92
RHBDL2-203ENST00000540558 MAGI1Q96QZ7 1491 aaPredicted RBP27.05■■□□□ 1.92
RHBDL2-203ENST00000540558 CHMP7Q8WUX9 453 aaPredicted RBP27■■□□□ 1.91
RHBDL2-203ENST00000540558 KIF27Q86VH2 1401 aa26.97■■□□□ 1.91
RHBDL2-203ENST00000540558 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.9
RHBDL2-203ENST00000540558 SYNJ2O15056 1496 aa26.94■■□□□ 1.9
RHBDL2-203ENST00000540558 ADAMTS12P58397 1594 aa26.91■■□□□ 1.9
RHBDL2-203ENST00000540558 FHAD1B1AJZ9 1412 aa26.85■■□□□ 1.89
RHBDL2-203ENST00000540558 IGF1RP08069 1367 aa26.81■■□□□ 1.88
RHBDL2-203ENST00000540558 GRIN2AQ12879 1464 aa26.8■■□□□ 1.88
RHBDL2-203ENST00000540558 CHIC1Q5VXU3 224 aa26.79■■□□□ 1.88
RHBDL2-203ENST00000540558 RUSC2Q8N2Y8 1516 aa26.79■■□□□ 1.88
RHBDL2-203ENST00000540558 CUL7Q14999 1698 aa26.78■■□□□ 1.88
RHBDL2-203ENST00000540558 CLASP1Q7Z460 1538 aa26.7■■□□□ 1.86
RHBDL2-203ENST00000540558 CARMIL1Q5VZK9 1371 aa26.69■■□□□ 1.86
RHBDL2-203ENST00000540558 CEP170Q5SW79 1584 aa26.68■■□□□ 1.86
RHBDL2-203ENST00000540558 RIMBP3CA6NJZ7 1639 aa26.63■■□□□ 1.85
RHBDL2-203ENST00000540558 RIMBP3BA6NNM3 1639 aa26.63■■□□□ 1.85
RHBDL2-203ENST00000540558 RIMBP3Q9UFD9 1639 aa26.63■■□□□ 1.85
RHBDL2-203ENST00000540558 NUP160Q12769 1436 aa26.63■■□□□ 1.85
RHBDL2-203ENST00000540558 ARHGEF11O15085 1522 aa26.6■■□□□ 1.85
RHBDL2-203ENST00000540558 FAM9AQ8IZU1 332 aaPredicted RBP26.57■■□□□ 1.84
RHBDL2-203ENST00000540558 RAPGEF2Q9Y4G8 1499 aa26.54■■□□□ 1.84
RHBDL2-203ENST00000540558 EEA1Q15075 1411 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms