RNA–Protein interactions for RNA: ENST00000357545.8

SPOCK3-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPOCK3, Length 2,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-202ENST00000357545 NISCHQ9Y2I1 1504 aa29.62■■■□□ 2.33
SPOCK3-202ENST00000357545 CCDC180Q9P1Z9 1646 aa25.28■■□□□ 1.64
SPOCK3-202ENST00000357545 ZCCHC6Q5VYS8 1495 aaKnown RBP25.2■■□□□ 1.63
SPOCK3-202ENST00000357545 SHROOM4Q9ULL8 1493 aa24.86■■□□□ 1.57
SPOCK3-202ENST00000357545 DCAF1Q9Y4B6 1507 aa24.6■■□□□ 1.53
SPOCK3-202ENST00000357545 SUPT5HO00267 1087 aaKnown RBP24.54■■□□□ 1.52
SPOCK3-202ENST00000357545 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
SPOCK3-202ENST00000357545 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
SPOCK3-202ENST00000357545 HRCP23327 699 aa24.29■■□□□ 1.48
SPOCK3-202ENST00000357545 ABCC9O60706 1549 aa23.89■■□□□ 1.41
SPOCK3-202ENST00000357545 PCGF6Q9BYE7 350 aa23.73■■□□□ 1.39
SPOCK3-202ENST00000357545 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
SPOCK3-202ENST00000357545 TRIM26Q12899 539 aaPredicted RBP23.48■■□□□ 1.35
SPOCK3-202ENST00000357545 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
SPOCK3-202ENST00000357545 RB1CC1Q8TDY2 1594 aa23.43■■□□□ 1.34
SPOCK3-202ENST00000357545 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
SPOCK3-202ENST00000357545 PPARGC1BQ86YN6 1023 aaKnown RBP23.37■■□□□ 1.33
SPOCK3-202ENST00000357545 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
SPOCK3-202ENST00000357545 ZEB1P37275 1124 aaPredicted RBP23.26■■□□□ 1.31
SPOCK3-202ENST00000357545 NACADO15069 1562 aa23.16■■□□□ 1.3
SPOCK3-202ENST00000357545 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
SPOCK3-202ENST00000357545 EIF4G1Q04637 1599 aaKnown RBP23■■□□□ 1.27
SPOCK3-202ENST00000357545 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
SPOCK3-202ENST00000357545 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
SPOCK3-202ENST00000357545 CECR2Q9BXF3 1484 aa22.86■■□□□ 1.25
SPOCK3-202ENST00000357545 WIZO95785 1651 aa22.82■■□□□ 1.24
SPOCK3-202ENST00000357545 PELP1Q8IZL8 1130 aaKnown RBP22.78■■□□□ 1.24
SPOCK3-202ENST00000357545 WRNQ14191 1432 aaPredicted RBP eCLIP22.66■■□□□ 1.22
SPOCK3-202ENST00000357545 TOP2AP11388 1531 aaKnown RBP22.64■■□□□ 1.21
SPOCK3-202ENST00000357545 FAM9AQ8IZU1 332 aaPredicted RBP22.54■■□□□ 1.2
SPOCK3-202ENST00000357545 SMARCA4P51532 1647 aa22.51■■□□□ 1.19
SPOCK3-202ENST00000357545 SCAF1Q9H7N4 1312 aaKnown RBP22.49■■□□□ 1.19
SPOCK3-202ENST00000357545 SMARCA2P51531 1590 aa22.48■■□□□ 1.19
SPOCK3-202ENST00000357545 EEA1Q15075 1411 aa22.45■■□□□ 1.18
SPOCK3-202ENST00000357545 CCDC88BA6NC98 1476 aa22.38■■□□□ 1.17
SPOCK3-202ENST00000357545 TNIKQ9UKE5 1360 aa22.37■■□□□ 1.17
SPOCK3-202ENST00000357545 UNC13AQ9UPW8 1703 aa22.35■■□□□ 1.17
SPOCK3-202ENST00000357545 ABCC8Q09428 1581 aa22.32■■□□□ 1.16
SPOCK3-202ENST00000357545 CEP162Q5TB80 1403 aa22.32■■□□□ 1.16
SPOCK3-202ENST00000357545 PEG3Q9GZU2 1588 aa22.27■■□□□ 1.15
SPOCK3-202ENST00000357545 ACIN1Q9UKV3 1341 aaKnown RBP22.24■■□□□ 1.15
SPOCK3-202ENST00000357545 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.15
SPOCK3-202ENST00000357545 MYT1Q01538 1121 aa22.2■■□□□ 1.14
SPOCK3-202ENST00000357545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.18■■□□□ 1.14
SPOCK3-202ENST00000357545 GOLGA3Q08378 1498 aa22.17■■□□□ 1.14
SPOCK3-202ENST00000357545 KIF21BO75037 1637 aa22.17■■□□□ 1.14
SPOCK3-202ENST00000357545 SOGA1O94964 1423 aa22.16■■□□□ 1.14
SPOCK3-202ENST00000357545 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
SPOCK3-202ENST00000357545 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
SPOCK3-202ENST00000357545 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
SPOCK3-202ENST00000357545 NEUROD1Q13562 356 aa22.05■■□□□ 1.12
SPOCK3-202ENST00000357545 CENPBP07199 599 aaPredicted RBP22.03■■□□□ 1.12
SPOCK3-202ENST00000357545 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
SPOCK3-202ENST00000357545 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
SPOCK3-202ENST00000357545 BAZ1BQ9UIG0 1483 aaKnown RBP22.01■■□□□ 1.11
SPOCK3-202ENST00000357545 BICRAQ9NZM4 1560 aa22■■□□□ 1.11
SPOCK3-202ENST00000357545 SYNJ1O43426 1573 aa21.95■■□□□ 1.1
SPOCK3-202ENST00000357545 ZNF316A6NFI3 1004 aaPredicted RBP21.91■■□□□ 1.1
SPOCK3-202ENST00000357545 PRKCSHP14314 528 aaPredicted RBP21.88■■□□□ 1.09
SPOCK3-202ENST00000357545 VPS8Q8N3P4 1428 aa21.87■■□□□ 1.09
SPOCK3-202ENST00000357545 GTF3C3Q9Y5Q9 886 aa21.83■■□□□ 1.09
SPOCK3-202ENST00000357545 CLIP1P30622 1438 aa21.81■■□□□ 1.08
SPOCK3-202ENST00000357545 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
SPOCK3-202ENST00000357545 BIVM-ERCC5R4GMW8 1640 aa21.78■■□□□ 1.08
SPOCK3-202ENST00000357545 UBTFP17480 764 aaKnown RBP21.77■■□□□ 1.08
SPOCK3-202ENST00000357545 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
SPOCK3-202ENST00000357545 ATAD2BQ9ULI0 1458 aa21.75■■□□□ 1.07
SPOCK3-202ENST00000357545 CLSPNQ9HAW4 1339 aa21.73■■□□□ 1.07
SPOCK3-202ENST00000357545 RAPGEF2Q9Y4G8 1499 aa21.67■■□□□ 1.06
SPOCK3-202ENST00000357545 PRXQ9BXM0 1461 aa21.61■■□□□ 1.05
SPOCK3-202ENST00000357545 CUX2O14529 1486 aa21.59■■□□□ 1.05
SPOCK3-202ENST00000357545 TTBK1Q5TCY1 1321 aaPredicted RBP21.54■■□□□ 1.04
SPOCK3-202ENST00000357545 ARAP1Q96P48 1450 aa21.53■■□□□ 1.04
SPOCK3-202ENST00000357545 MIER1Q8N108 512 aa21.52■■□□□ 1.03
SPOCK3-202ENST00000357545 RRBP1Q9P2E9 1410 aaKnown RBP21.51■■□□□ 1.03
SPOCK3-202ENST00000357545 HMGXB3Q12766 1538 aa21.49■■□□□ 1.03
SPOCK3-202ENST00000357545 DHX57Q6P158 1386 aaKnown RBP21.47■■□□□ 1.03
SPOCK3-202ENST00000357545 HNRNPUL2Q1KMD3 747 aaKnown RBP21.44■■□□□ 1.02
SPOCK3-202ENST00000357545 APLP2Q06481 763 aa21.42■■□□□ 1.02
SPOCK3-202ENST00000357545 MAP3K1Q13233 1512 aa21.38■■□□□ 1.01
SPOCK3-202ENST00000357545 PABPN1Q86U42 306 aaKnown RBP eCLIP21.37■■□□□ 1.01
SPOCK3-202ENST00000357545 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
SPOCK3-202ENST00000357545 CUX1P39880 1505 aa21.36■■□□□ 1.01
SPOCK3-202ENST00000357545 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
SPOCK3-202ENST00000357545 KIF27Q86VH2 1401 aa21.29■■□□□ 1
SPOCK3-202ENST00000357545 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
SPOCK3-202ENST00000357545 CFTRP13569 1480 aa21.26■□□□□ 0.99
SPOCK3-202ENST00000357545 ARHGAP35Q9NRY4 1499 aa21.25■□□□□ 0.99
SPOCK3-202ENST00000357545 CCNB3Q8WWL7 1395 aa21.21■□□□□ 0.99
SPOCK3-202ENST00000357545 KANK4Q5T7N3 995 aaPredicted RBP21.18■□□□□ 0.98
SPOCK3-202ENST00000357545 TIAM1Q13009 1591 aa21.18■□□□□ 0.98
SPOCK3-202ENST00000357545 MAPKBP1O60336 1514 aa21.16■□□□□ 0.98
SPOCK3-202ENST00000357545 SLC24A1O60721 1099 aa21.15■□□□□ 0.98
SPOCK3-202ENST00000357545 CFAP43Q8NDM7 1665 aa21.14■□□□□ 0.97
SPOCK3-202ENST00000357545 BCL11AQ9H165 835 aa21.07■□□□□ 0.96
SPOCK3-202ENST00000357545 SUPT16HQ9Y5B9 1047 aaKnown RBP21.07■□□□□ 0.96
SPOCK3-202ENST00000357545 LRRC9Q6ZRR7 1453 aa21.03■□□□□ 0.96
SPOCK3-202ENST00000357545 RAB3GAP2Q9H2M9 1393 aa21.01■□□□□ 0.95
SPOCK3-202ENST00000357545 IGF1RP08069 1367 aa21.01■□□□□ 0.95
SPOCK3-202ENST00000357545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms