RNA–Protein interactions for RNA: ENST00000398594.3

PCDHGB7-201, Transcript of protocadherin gamma subfamily B, 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB7, Length 4,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB7-201ENST00000398594 DCAF8L2P0C7V8 631 aa26.06■■□□□ 1.76
PCDHGB7-201ENST00000398594 NISCHQ9Y2I1 1504 aa25.12■■□□□ 1.61
PCDHGB7-201ENST00000398594 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
PCDHGB7-201ENST00000398594 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
PCDHGB7-201ENST00000398594 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
PCDHGB7-201ENST00000398594 FAM9AQ8IZU1 332 aaPredicted RBP22.97■■□□□ 1.27
PCDHGB7-201ENST00000398594 APLP2Q06481 763 aa22.82■■□□□ 1.24
PCDHGB7-201ENST00000398594 RANGAP1P46060 587 aaPredicted RBP22.61■■□□□ 1.21
PCDHGB7-201ENST00000398594 TTBK1Q5TCY1 1321 aaPredicted RBP22.6■■□□□ 1.21
PCDHGB7-201ENST00000398594 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
PCDHGB7-201ENST00000398594 ATP1B4Q9UN42 357 aaPredicted RBP22.35■■□□□ 1.17
PCDHGB7-201ENST00000398594 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
PCDHGB7-201ENST00000398594 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
PCDHGB7-201ENST00000398594 ABCC9O60706 1549 aa22.06■■□□□ 1.12
PCDHGB7-201ENST00000398594 PABPN1Q86U42 306 aaKnown RBP eCLIP21.94■■□□□ 1.1
PCDHGB7-201ENST00000398594 PPARGC1BQ86YN6 1023 aaKnown RBP21.8■■□□□ 1.08
PCDHGB7-201ENST00000398594 CCER1Q8TC90 406 aaPredicted RBP21.8■■□□□ 1.08
PCDHGB7-201ENST00000398594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
PCDHGB7-201ENST00000398594 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
PCDHGB7-201ENST00000398594 PELP1Q8IZL8 1130 aaKnown RBP21.57■■□□□ 1.04
PCDHGB7-201ENST00000398594 MYT1LQ9UL68 1186 aa21.55■■□□□ 1.04
PCDHGB7-201ENST00000398594 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
PCDHGB7-201ENST00000398594 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
PCDHGB7-201ENST00000398594 ITGAEP38570 1179 aa21.51■■□□□ 1.03
PCDHGB7-201ENST00000398594 ZEB1P37275 1124 aaPredicted RBP21.47■■□□□ 1.03
PCDHGB7-201ENST00000398594 TRIM26Q12899 539 aaPredicted RBP21.24■□□□□ 0.99
PCDHGB7-201ENST00000398594 FBLN2P98095 1184 aa21.18■□□□□ 0.98
PCDHGB7-201ENST00000398594 CENPBP07199 599 aaPredicted RBP21.16■□□□□ 0.98
PCDHGB7-201ENST00000398594 POLR3GLQ9BT43 218 aa21.1■□□□□ 0.97
PCDHGB7-201ENST00000398594 YTHDC1Q96MU7 727 aaKnown RBP21.05■□□□□ 0.96
PCDHGB7-201ENST00000398594 FAM50AQ14320 339 aaKnown RBP20.97■□□□□ 0.95
PCDHGB7-201ENST00000398594 CNGB1Q14028 1251 aaPredicted RBP20.94■□□□□ 0.94
PCDHGB7-201ENST00000398594 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
PCDHGB7-201ENST00000398594 NEFLP07196 543 aa20.87■□□□□ 0.93
PCDHGB7-201ENST00000398594 P3H3Q8IVL6 736 aa20.83■□□□□ 0.93
PCDHGB7-201ENST00000398594 ARID3CA6NKF2 412 aa20.82■□□□□ 0.92
PCDHGB7-201ENST00000398594 TRIM52Q96A61 297 aa20.8■□□□□ 0.92
PCDHGB7-201ENST00000398594 HRCP23327 699 aa20.77■□□□□ 0.91
PCDHGB7-201ENST00000398594 SLC4A1APQ9BWU0 796 aaKnown RBP20.76■□□□□ 0.91
PCDHGB7-201ENST00000398594 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
PCDHGB7-201ENST00000398594 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
PCDHGB7-201ENST00000398594 ERICH6Q7L0X2 663 aa20.68■□□□□ 0.9
PCDHGB7-201ENST00000398594 NEUROD1Q13562 356 aa20.63■□□□□ 0.89
PCDHGB7-201ENST00000398594 ZNF326Q5BKZ1 582 aaKnown RBP20.56■□□□□ 0.88
PCDHGB7-201ENST00000398594 ZNF777Q9ULD5 760 aaPredicted RBP20.53■□□□□ 0.88
PCDHGB7-201ENST00000398594 CCDC180Q9P1Z9 1646 aa20.49■□□□□ 0.87
PCDHGB7-201ENST00000398594 CDK11AQ9UQ88 783 aaPredicted RBP20.45■□□□□ 0.86
PCDHGB7-201ENST00000398594 RB1CC1Q8TDY2 1594 aa20.37■□□□□ 0.85
PCDHGB7-201ENST00000398594 NPM1P06748 294 aaKnown RBP eCLIP20.37■□□□□ 0.85
PCDHGB7-201ENST00000398594 BCANQ96GW7 911 aa20.35■□□□□ 0.85
PCDHGB7-201ENST00000398594 DIEXFQ68CQ4 756 aaKnown RBP20.32■□□□□ 0.84
PCDHGB7-201ENST00000398594 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
PCDHGB7-201ENST00000398594 ESF1Q9H501 851 aaKnown RBP20.25■□□□□ 0.83
PCDHGB7-201ENST00000398594 MYT1Q01538 1121 aa20.24■□□□□ 0.83
PCDHGB7-201ENST00000398594 PLPPR3Q6T4P5 718 aa20.23■□□□□ 0.83
PCDHGB7-201ENST00000398594 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
PCDHGB7-201ENST00000398594 NACADO15069 1562 aa20.14■□□□□ 0.81
PCDHGB7-201ENST00000398594 DAXXQ9UER7 740 aaPredicted RBP20.14■□□□□ 0.81
PCDHGB7-201ENST00000398594 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
PCDHGB7-201ENST00000398594 CHIC2Q9UKJ5 165 aa20.11■□□□□ 0.81
PCDHGB7-201ENST00000398594 STAG3Q9UJ98 1225 aa20.09■□□□□ 0.81
PCDHGB7-201ENST00000398594 ANP32CO43423 234 aa20.08■□□□□ 0.81
PCDHGB7-201ENST00000398594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.05■□□□□ 0.8
PCDHGB7-201ENST00000398594 BAZ1BQ9UIG0 1483 aaKnown RBP20.04■□□□□ 0.8
PCDHGB7-201ENST00000398594 CLSPNQ9HAW4 1339 aa20.04■□□□□ 0.8
PCDHGB7-201ENST00000398594 SLC24A1O60721 1099 aa20.02■□□□□ 0.8
PCDHGB7-201ENST00000398594 TSPY4P0CV99 314 aa20.01■□□□□ 0.79
PCDHGB7-201ENST00000398594 TSPY10P0CW01 314 aa20.01■□□□□ 0.79
PCDHGB7-201ENST00000398594 KCNH8Q96L42 1107 aa20■□□□□ 0.79
PCDHGB7-201ENST00000398594 MTUS2Q5JR59 1369 aa19.99■□□□□ 0.79
PCDHGB7-201ENST00000398594 ZNF316A6NFI3 1004 aaPredicted RBP19.96■□□□□ 0.79
PCDHGB7-201ENST00000398594 TONSLQ96HA7 1378 aa19.91■□□□□ 0.78
PCDHGB7-201ENST00000398594 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
PCDHGB7-201ENST00000398594 NEFMP07197 916 aa19.9■□□□□ 0.78
PCDHGB7-201ENST00000398594 CLIP1P30622 1438 aa19.9■□□□□ 0.78
PCDHGB7-201ENST00000398594 ERCC6Q03468 1493 aa19.88■□□□□ 0.77
PCDHGB7-201ENST00000398594 CECR2Q9BXF3 1484 aa19.87■□□□□ 0.77
PCDHGB7-201ENST00000398594 PLEKHD1A6NEE1 506 aa19.87■□□□□ 0.77
PCDHGB7-201ENST00000398594 BCL11AQ9H165 835 aa19.84■□□□□ 0.77
PCDHGB7-201ENST00000398594 KDM2AQ9Y2K7 1162 aa19.8■□□□□ 0.76
PCDHGB7-201ENST00000398594 RRP7BPQ9NSQ0 103 aa19.79■□□□□ 0.76
PCDHGB7-201ENST00000398594 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
PCDHGB7-201ENST00000398594 KIF27Q86VH2 1401 aa19.78■□□□□ 0.76
PCDHGB7-201ENST00000398594 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
PCDHGB7-201ENST00000398594 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.75
PCDHGB7-201ENST00000398594 CANXP27824 592 aaKnown RBP19.76■□□□□ 0.75
PCDHGB7-201ENST00000398594 ZBTB47Q9UFB7 747 aaPredicted RBP19.76■□□□□ 0.75
PCDHGB7-201ENST00000398594 EEA1Q15075 1411 aa19.73■□□□□ 0.75
PCDHGB7-201ENST00000398594 DDX10Q13206 875 aaKnown RBP19.7■□□□□ 0.74
PCDHGB7-201ENST00000398594 GOLGA3Q08378 1498 aa19.69■□□□□ 0.74
PCDHGB7-201ENST00000398594 CFDP1Q9UEE9 299 aaPredicted RBP19.69■□□□□ 0.74
PCDHGB7-201ENST00000398594 CEP162Q5TB80 1403 aa19.66■□□□□ 0.74
PCDHGB7-201ENST00000398594 ARID4BQ4LE39 1312 aaPredicted RBP19.65■□□□□ 0.74
PCDHGB7-201ENST00000398594 RGL3Q3MIN7 710 aa19.61■□□□□ 0.73
PCDHGB7-201ENST00000398594 PPP1R15AO75807 674 aaPredicted RBP19.6■□□□□ 0.73
PCDHGB7-201ENST00000398594 GTF3C3Q9Y5Q9 886 aa19.6■□□□□ 0.73
PCDHGB7-201ENST00000398594 SALL2Q9Y467 1007 aaPredicted RBP19.59■□□□□ 0.73
PCDHGB7-201ENST00000398594 HIRIP3Q9BW71 556 aaPredicted RBP19.59■□□□□ 0.73
PCDHGB7-201ENST00000398594 FAM9BQ8IZU0 186 aa19.57■□□□□ 0.72
PCDHGB7-201ENST00000398594 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms