RNA–Protein interactions for RNA: ENST00000412461.2

AC004461.1-201, humanhuman

BASIC

Gene AC004461.1, Length 403 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004461.1-201ENST00000412461 NISCHQ9Y2I1 1504 aa41.04■■■■■ 4.16
AC004461.1-201ENST00000412461 CCDC180Q9P1Z9 1646 aa36.64■■■■□ 3.46
AC004461.1-201ENST00000412461 ABCC9O60706 1549 aa36.33■■■■□ 3.41
AC004461.1-201ENST00000412461 RB1CC1Q8TDY2 1594 aa34.7■■■■□ 3.14
AC004461.1-201ENST00000412461 NACADO15069 1562 aa34.56■■■■□ 3.12
AC004461.1-201ENST00000412461 DCAF8L2P0C7V8 631 aa34.5■■■■□ 3.11
AC004461.1-201ENST00000412461 MYO15BQ96JP2 1530 aa34.2■■■■□ 3.06
AC004461.1-201ENST00000412461 ZCCHC6Q5VYS8 1495 aaKnown RBP34.08■■■■□ 3.05
AC004461.1-201ENST00000412461 UNC13AQ9UPW8 1703 aa33.97■■■■□ 3.03
AC004461.1-201ENST00000412461 DCAF1Q9Y4B6 1507 aa33.9■■■■□ 3.02
AC004461.1-201ENST00000412461 PABPN1Q86U42 306 aaKnown RBP eCLIP33.9■■■■□ 3.02
AC004461.1-201ENST00000412461 DNAJC5BQ9UF47 199 aa33.8■■■■□ 3
AC004461.1-201ENST00000412461 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
AC004461.1-201ENST00000412461 SCRIBQ14160 1630 aa33.44■■■□□ 2.94
AC004461.1-201ENST00000412461 SHROOM4Q9ULL8 1493 aa33.23■■■□□ 2.91
AC004461.1-201ENST00000412461 EIF4G1Q04637 1599 aaKnown RBP32.84■■■□□ 2.85
AC004461.1-201ENST00000412461 CC2D2AQ9P2K1 1620 aa32.83■■■□□ 2.85
AC004461.1-201ENST00000412461 CECR2Q9BXF3 1484 aa32.67■■■□□ 2.82
AC004461.1-201ENST00000412461 SMARCA4P51532 1647 aa31.93■■■□□ 2.7
AC004461.1-201ENST00000412461 NCAPD3P42695 1498 aa31.92■■■□□ 2.7
AC004461.1-201ENST00000412461 ATAD2BQ9ULI0 1458 aa31.88■■■□□ 2.69
AC004461.1-201ENST00000412461 BAZ1AQ9NRL2 1556 aaPredicted RBP31.81■■■□□ 2.68
AC004461.1-201ENST00000412461 SMARCA2P51531 1590 aa31.78■■■□□ 2.68
AC004461.1-201ENST00000412461 HMGXB3Q12766 1538 aa31.7■■■□□ 2.66
AC004461.1-201ENST00000412461 MROH2BQ7Z745 1585 aa31.64■■■□□ 2.66
AC004461.1-201ENST00000412461 PEG3Q9GZU2 1588 aa31.61■■■□□ 2.65
AC004461.1-201ENST00000412461 BAZ1BQ9UIG0 1483 aaKnown RBP31.58■■■□□ 2.65
AC004461.1-201ENST00000412461 NESP48681 1621 aa31.33■■■□□ 2.61
AC004461.1-201ENST00000412461 ERCC6Q03468 1493 aa31.3■■■□□ 2.6
AC004461.1-201ENST00000412461 WIZO95785 1651 aa31.29■■■□□ 2.6
AC004461.1-201ENST00000412461 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
AC004461.1-201ENST00000412461 RSF1Q96T23 1441 aaPredicted RBP31.12■■■□□ 2.57
AC004461.1-201ENST00000412461 CUX2O14529 1486 aa31.12■■■□□ 2.57
AC004461.1-201ENST00000412461 CADPSQ9ULU8 1353 aa30.96■■■□□ 2.55
AC004461.1-201ENST00000412461 PDS5BQ9NTI5 1447 aa30.92■■■□□ 2.54
AC004461.1-201ENST00000412461 KIF21AQ7Z4S6 1674 aa30.92■■■□□ 2.54
AC004461.1-201ENST00000412461 THOC2Q8NI27 1593 aaKnown RBP30.91■■■□□ 2.54
AC004461.1-201ENST00000412461 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
AC004461.1-201ENST00000412461 DNAJC5Q9H3Z4 198 aa30.73■■■□□ 2.51
AC004461.1-201ENST00000412461 CFTRP13569 1480 aa30.69■■■□□ 2.5
AC004461.1-201ENST00000412461 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.5
AC004461.1-201ENST00000412461 FANCD2Q9BXW9 1451 aa30.61■■■□□ 2.49
AC004461.1-201ENST00000412461 CEP164Q9UPV0 1460 aa30.59■■■□□ 2.49
AC004461.1-201ENST00000412461 WDR62O43379 1518 aa30.57■■■□□ 2.48
AC004461.1-201ENST00000412461 CCDC88BA6NC98 1476 aa30.56■■■□□ 2.48
AC004461.1-201ENST00000412461 PRDM2Q13029 1718 aa30.4■■■□□ 2.46
AC004461.1-201ENST00000412461 URB2Q14146 1524 aaKnown RBP30.35■■■□□ 2.45
AC004461.1-201ENST00000412461 TOPBP1Q92547 1522 aa30.08■■■□□ 2.41
AC004461.1-201ENST00000412461 SUPT5HO00267 1087 aaKnown RBP30.03■■■□□ 2.4
AC004461.1-201ENST00000412461 ABCC8Q09428 1581 aa30■■■□□ 2.39
AC004461.1-201ENST00000412461 DNMBPQ6XZF7 1577 aa29.98■■■□□ 2.39
AC004461.1-201ENST00000412461 IFT140Q96RY7 1462 aa29.97■■■□□ 2.39
AC004461.1-201ENST00000412461 ZNF608Q9ULD9 1512 aaPredicted RBP29.92■■■□□ 2.38
AC004461.1-201ENST00000412461 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
AC004461.1-201ENST00000412461 TARBP1Q13395 1621 aaKnown RBP29.79■■■□□ 2.36
AC004461.1-201ENST00000412461 OSCARQ8IYS5 282 aa29.78■■■□□ 2.36
AC004461.1-201ENST00000412461 EIF4G3O43432 1585 aaKnown RBP29.75■■■□□ 2.35
AC004461.1-201ENST00000412461 CUX1P39880 1505 aa29.71■■■□□ 2.35
AC004461.1-201ENST00000412461 AQRO60306 1485 aaKnown RBP eCLIP29.7■■■□□ 2.35
AC004461.1-201ENST00000412461 RAD54L2Q9Y4B4 1467 aa29.7■■■□□ 2.35
AC004461.1-201ENST00000412461 SOGA1O94964 1423 aa29.67■■■□□ 2.34
AC004461.1-201ENST00000412461 FGD5Q6ZNL6 1462 aa29.67■■■□□ 2.34
AC004461.1-201ENST00000412461 TDRD9Q8NDG6 1382 aaKnown RBP29.58■■■□□ 2.33
AC004461.1-201ENST00000412461 TRIM41Q8WV44 630 aa29.53■■■□□ 2.32
AC004461.1-201ENST00000412461 CHD1O14646 1710 aa29.48■■■□□ 2.31
AC004461.1-201ENST00000412461 WDR97A6NE52 1622 aa29.46■■■□□ 2.31
AC004461.1-201ENST00000412461 FBLN2P98095 1184 aa29.41■■■□□ 2.3
AC004461.1-201ENST00000412461 SNAPC4Q5SXM2 1469 aa29.39■■■□□ 2.3
AC004461.1-201ENST00000412461 RIMBP3CA6NJZ7 1639 aa29.36■■■□□ 2.29
AC004461.1-201ENST00000412461 RIMBP3BA6NNM3 1639 aa29.36■■■□□ 2.29
AC004461.1-201ENST00000412461 RIMBP3Q9UFD9 1639 aa29.36■■■□□ 2.29
AC004461.1-201ENST00000412461 GRIN2BQ13224 1484 aa29.35■■■□□ 2.29
AC004461.1-201ENST00000412461 WRNQ14191 1432 aaPredicted RBP eCLIP29.34■■■□□ 2.29
AC004461.1-201ENST00000412461 ABCA10Q8WWZ4 1543 aa29.34■■■□□ 2.29
AC004461.1-201ENST00000412461 GAPVD1Q14C86 1478 aa29.31■■■□□ 2.28
AC004461.1-201ENST00000412461 MAGI1Q96QZ7 1491 aaPredicted RBP29.31■■■□□ 2.28
AC004461.1-201ENST00000412461 TOP2BQ02880 1626 aa29.31■■■□□ 2.28
AC004461.1-201ENST00000412461 BIVM-ERCC5R4GMW8 1640 aa29.31■■■□□ 2.28
AC004461.1-201ENST00000412461 SYNJ1O43426 1573 aa29.3■■■□□ 2.28
AC004461.1-201ENST00000412461 ARHGEF11O15085 1522 aa29.3■■■□□ 2.28
AC004461.1-201ENST00000412461 PBRM1Q86U86 1689 aa29.27■■■□□ 2.28
AC004461.1-201ENST00000412461 ABCA5Q8WWZ7 1642 aa29.27■■■□□ 2.28
AC004461.1-201ENST00000412461 CHMP7Q8WUX9 453 aaPredicted RBP29.25■■■□□ 2.27
AC004461.1-201ENST00000412461 SYNJ2O15056 1496 aa29.21■■■□□ 2.27
AC004461.1-201ENST00000412461 CLASP1Q7Z460 1538 aa29.14■■■□□ 2.25
AC004461.1-201ENST00000412461 CYB5RLQ6IPT4 315 aa29.08■■■□□ 2.25
AC004461.1-201ENST00000412461 ARAP1Q96P48 1450 aa29.05■■■□□ 2.24
AC004461.1-201ENST00000412461 ADAMTS12P58397 1594 aa29.01■■■□□ 2.23
AC004461.1-201ENST00000412461 GRIN2AQ12879 1464 aa28.98■■■□□ 2.23
AC004461.1-201ENST00000412461 ERICH3Q5RHP9 1530 aa28.96■■■□□ 2.23
AC004461.1-201ENST00000412461 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
AC004461.1-201ENST00000412461 NUP160Q12769 1436 aa28.88■■■□□ 2.21
AC004461.1-201ENST00000412461 CEP170Q5SW79 1584 aa28.88■■■□□ 2.21
AC004461.1-201ENST00000412461 ERCC6L2Q5T890 1561 aa28.75■■■□□ 2.19
AC004461.1-201ENST00000412461 KIF27Q86VH2 1401 aa28.74■■■□□ 2.19
AC004461.1-201ENST00000412461 IGF1RP08069 1367 aa28.72■■■□□ 2.19
AC004461.1-201ENST00000412461 SHROOM2Q13796 1616 aa28.7■■■□□ 2.19
AC004461.1-201ENST00000412461 TRHP20396 242 aaPredicted RBP28.63■■■□□ 2.17
AC004461.1-201ENST00000412461 CUL7Q14999 1698 aa28.61■■■□□ 2.17
AC004461.1-201ENST00000412461 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 553.9 ms