RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 NISCHQ9Y2I1 1504 aa36.77■■■■□ 3.48
CNN1-202ENST00000535659 CCDC180Q9P1Z9 1646 aa32.44■■■□□ 2.78
CNN1-202ENST00000535659 ABCC9O60706 1549 aa31.32■■■□□ 2.6
CNN1-202ENST00000535659 ZCCHC6Q5VYS8 1495 aaKnown RBP30.74■■■□□ 2.51
CNN1-202ENST00000535659 DCAF8L2P0C7V8 631 aa30.67■■■□□ 2.5
CNN1-202ENST00000535659 DCAF1Q9Y4B6 1507 aa30.43■■■□□ 2.46
CNN1-202ENST00000535659 NACADO15069 1562 aa30.4■■■□□ 2.46
CNN1-202ENST00000535659 MYO15BQ96JP2 1530 aa30.36■■■□□ 2.45
CNN1-202ENST00000535659 RB1CC1Q8TDY2 1594 aa30.31■■■□□ 2.44
CNN1-202ENST00000535659 SCRIBQ14160 1630 aa29.7■■■□□ 2.34
CNN1-202ENST00000535659 UNC13AQ9UPW8 1703 aa29.63■■■□□ 2.33
CNN1-202ENST00000535659 SHROOM4Q9ULL8 1493 aa29.41■■■□□ 2.3
CNN1-202ENST00000535659 PABPN1Q86U42 306 aaKnown RBP eCLIP29.41■■■□□ 2.3
CNN1-202ENST00000535659 BICRAQ9NZM4 1560 aa29.39■■■□□ 2.29
CNN1-202ENST00000535659 DNAJC5BQ9UF47 199 aa29.37■■■□□ 2.29
CNN1-202ENST00000535659 CECR2Q9BXF3 1484 aa28.61■■■□□ 2.17
CNN1-202ENST00000535659 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.16
CNN1-202ENST00000535659 BAZ1AQ9NRL2 1556 aaPredicted RBP28.46■■■□□ 2.15
CNN1-202ENST00000535659 SMARCA4P51532 1647 aa28.43■■■□□ 2.14
CNN1-202ENST00000535659 MROH2BQ7Z745 1585 aa28.37■■■□□ 2.13
CNN1-202ENST00000535659 CC2D2AQ9P2K1 1620 aa28.33■■■□□ 2.13
CNN1-202ENST00000535659 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
CNN1-202ENST00000535659 ATAD2BQ9ULI0 1458 aa28.16■■■□□ 2.1
CNN1-202ENST00000535659 SMARCA2P51531 1590 aa28.13■■■□□ 2.09
CNN1-202ENST00000535659 PEG3Q9GZU2 1588 aa28.13■■■□□ 2.09
CNN1-202ENST00000535659 WIZO95785 1651 aa28.09■■■□□ 2.09
CNN1-202ENST00000535659 NCAPD3P42695 1498 aa28.08■■■□□ 2.09
CNN1-202ENST00000535659 SUPT5HO00267 1087 aaKnown RBP27.98■■■□□ 2.07
CNN1-202ENST00000535659 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.07
CNN1-202ENST00000535659 HMGXB3Q12766 1538 aa27.95■■■□□ 2.06
CNN1-202ENST00000535659 TOP2AP11388 1531 aaKnown RBP27.81■■■□□ 2.04
CNN1-202ENST00000535659 CCDC88BA6NC98 1476 aa27.5■■□□□ 1.99
CNN1-202ENST00000535659 CADPSQ9ULU8 1353 aa27.3■■□□□ 1.96
CNN1-202ENST00000535659 NESP48681 1621 aa27.25■■□□□ 1.95
CNN1-202ENST00000535659 DNAJC5Q9H3Z4 198 aa27.25■■□□□ 1.95
CNN1-202ENST00000535659 LAMC3Q9Y6N6 1575 aa27.23■■□□□ 1.95
CNN1-202ENST00000535659 CFTRP13569 1480 aa27.22■■□□□ 1.95
CNN1-202ENST00000535659 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
CNN1-202ENST00000535659 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
CNN1-202ENST00000535659 FANCD2Q9BXW9 1451 aa26.96■■□□□ 1.91
CNN1-202ENST00000535659 ERCC6Q03468 1493 aa26.95■■□□□ 1.9
CNN1-202ENST00000535659 KIF21AQ7Z4S6 1674 aa26.93■■□□□ 1.9
CNN1-202ENST00000535659 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
CNN1-202ENST00000535659 CUX2O14529 1486 aa26.79■■□□□ 1.88
CNN1-202ENST00000535659 MRC2Q9UBG0 1479 aa26.73■■□□□ 1.87
CNN1-202ENST00000535659 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
CNN1-202ENST00000535659 URB2Q14146 1524 aaKnown RBP26.67■■□□□ 1.86
CNN1-202ENST00000535659 ABCC8Q09428 1581 aa26.66■■□□□ 1.86
CNN1-202ENST00000535659 WDR62O43379 1518 aa26.62■■□□□ 1.85
CNN1-202ENST00000535659 WRNQ14191 1432 aaPredicted RBP eCLIP26.6■■□□□ 1.85
CNN1-202ENST00000535659 DNMBPQ6XZF7 1577 aa26.59■■□□□ 1.85
CNN1-202ENST00000535659 CUX1P39880 1505 aa26.58■■□□□ 1.85
CNN1-202ENST00000535659 TOPBP1Q92547 1522 aa26.58■■□□□ 1.85
CNN1-202ENST00000535659 SYNJ1O43426 1573 aa26.51■■□□□ 1.83
CNN1-202ENST00000535659 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
CNN1-202ENST00000535659 BIVM-ERCC5R4GMW8 1640 aa26.46■■□□□ 1.83
CNN1-202ENST00000535659 FGD5Q6ZNL6 1462 aa26.41■■□□□ 1.82
CNN1-202ENST00000535659 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
CNN1-202ENST00000535659 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
CNN1-202ENST00000535659 POLA1P09884 1462 aaPredicted RBP26.4■■□□□ 1.82
CNN1-202ENST00000535659 SOGA1O94964 1423 aa26.34■■□□□ 1.81
CNN1-202ENST00000535659 IFT140Q96RY7 1462 aa26.29■■□□□ 1.8
CNN1-202ENST00000535659 RAD54L2Q9Y4B4 1467 aa26.29■■□□□ 1.8
CNN1-202ENST00000535659 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
CNN1-202ENST00000535659 ABCA10Q8WWZ4 1543 aa26.16■■□□□ 1.78
CNN1-202ENST00000535659 WDR97A6NE52 1622 aa26.15■■□□□ 1.78
CNN1-202ENST00000535659 ZNF608Q9ULD9 1512 aaPredicted RBP26.14■■□□□ 1.78
CNN1-202ENST00000535659 TDRD9Q8NDG6 1382 aaKnown RBP26.13■■□□□ 1.77
CNN1-202ENST00000535659 AQRO60306 1485 aaKnown RBP eCLIP26.08■■□□□ 1.77
CNN1-202ENST00000535659 EIF4G3O43432 1585 aaKnown RBP26.06■■□□□ 1.76
CNN1-202ENST00000535659 KIF27Q86VH2 1401 aa26.02■■□□□ 1.76
CNN1-202ENST00000535659 ABCA5Q8WWZ7 1642 aa26.02■■□□□ 1.76
CNN1-202ENST00000535659 GAPVD1Q14C86 1478 aa26■■□□□ 1.75
CNN1-202ENST00000535659 RUSC2Q8N2Y8 1516 aa25.95■■□□□ 1.74
CNN1-202ENST00000535659 GRIN2BQ13224 1484 aa25.92■■□□□ 1.74
CNN1-202ENST00000535659 PBRM1Q86U86 1689 aa25.91■■□□□ 1.74
CNN1-202ENST00000535659 IGF1RP08069 1367 aa25.89■■□□□ 1.73
CNN1-202ENST00000535659 ERICH3Q5RHP9 1530 aa25.86■■□□□ 1.73
CNN1-202ENST00000535659 FAM9AQ8IZU1 332 aaPredicted RBP25.85■■□□□ 1.73
CNN1-202ENST00000535659 SNAPC4Q5SXM2 1469 aa25.84■■□□□ 1.73
CNN1-202ENST00000535659 EEA1Q15075 1411 aa25.84■■□□□ 1.73
CNN1-202ENST00000535659 CSRNP3Q8WYN3 585 aa25.82■■□□□ 1.72
CNN1-202ENST00000535659 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
CNN1-202ENST00000535659 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
CNN1-202ENST00000535659 CHMP7Q8WUX9 453 aaPredicted RBP25.73■■□□□ 1.71
CNN1-202ENST00000535659 CARMIL1Q5VZK9 1371 aa25.73■■□□□ 1.71
CNN1-202ENST00000535659 FHAD1B1AJZ9 1412 aa25.73■■□□□ 1.71
CNN1-202ENST00000535659 FBLN2P98095 1184 aa25.73■■□□□ 1.71
CNN1-202ENST00000535659 CUL7Q14999 1698 aa25.72■■□□□ 1.71
CNN1-202ENST00000535659 SYNJ2O15056 1496 aa25.69■■□□□ 1.7
CNN1-202ENST00000535659 PRXQ9BXM0 1461 aa25.63■■□□□ 1.69
CNN1-202ENST00000535659 CHD1O14646 1710 aa25.61■■□□□ 1.69
CNN1-202ENST00000535659 GRIN2AQ12879 1464 aa25.6■■□□□ 1.69
CNN1-202ENST00000535659 RAPGEF2Q9Y4G8 1499 aa25.6■■□□□ 1.69
CNN1-202ENST00000535659 OSCARQ8IYS5 282 aa25.56■■□□□ 1.68
CNN1-202ENST00000535659 KIF21BO75037 1637 aa25.52■■□□□ 1.68
CNN1-202ENST00000535659 EHMT2Q96KQ7 1210 aa25.47■■□□□ 1.67
CNN1-202ENST00000535659 NUP160Q12769 1436 aa25.46■■□□□ 1.67
CNN1-202ENST00000535659 CEP170Q5SW79 1584 aa25.46■■□□□ 1.67
CNN1-202ENST00000535659 GOLGA3Q08378 1498 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms