Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.23■□□□□ 0.19
SSR1P43307 AL359258.3-201ENST00000622910 2331 ntBASIC16.23■□□□□ 0.19
SSR1P43307 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.23■□□□□ 0.19
SSR1P43307 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.23■□□□□ 0.19
SSR1P43307 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SSR1P43307 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SSR1P43307 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SSR1P43307 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.23■□□□□ 0.19
SSR1P43307 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.23■□□□□ 0.19
SSR1P43307 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.23■□□□□ 0.19
SSR1P43307 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.23■□□□□ 0.19
SSR1P43307 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SSR1P43307 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.23■□□□□ 0.19
SSR1P43307 AL158211.3-201ENST00000607385 239 ntBASIC16.23■□□□□ 0.19
SSR1P43307 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.23■□□□□ 0.19
SSR1P43307 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.23■□□□□ 0.19
SSR1P43307 AL390754.1-201ENST00000619088 582 ntBASIC16.23■□□□□ 0.19
SSR1P43307 AC139530.3-201ENST00000620344 690 ntBASIC16.23■□□□□ 0.19
SSR1P43307 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SSR1P43307 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SSR1P43307 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.23■□□□□ 0.19
SSR1P43307 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SSR1P43307 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.23■□□□□ 0.19
SSR1P43307 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.23■□□□□ 0.19
SSR1P43307 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 SNX18-202ENST00000343017 3140 ntBASIC16.23■□□□□ 0.19
SSR1P43307 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.22■□□□□ 0.19
SSR1P43307 AC013726.1-201ENST00000563747 2285 ntBASIC16.22■□□□□ 0.19
SSR1P43307 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
SSR1P43307 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.22■□□□□ 0.19
SSR1P43307 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SSR1P43307 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.22■□□□□ 0.19
SSR1P43307 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.22■□□□□ 0.19
SSR1P43307 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SSR1P43307 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.22■□□□□ 0.19
SSR1P43307 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SSR1P43307 ADAMTS7P1-201ENST00000613213 4793 ntBASIC16.22■□□□□ 0.19
SSR1P43307 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SSR1P43307 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
SSR1P43307 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SSR1P43307 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SSR1P43307 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.22■□□□□ 0.19
SSR1P43307 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.22■□□□□ 0.19
SSR1P43307 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.22■□□□□ 0.19
SSR1P43307 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.22■□□□□ 0.19
SSR1P43307 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.22■□□□□ 0.19
SSR1P43307 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.22■□□□□ 0.19
SSR1P43307 AC015911.4-201ENST00000588022 1070 ntBASIC16.22■□□□□ 0.19
SSR1P43307 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.22■□□□□ 0.19
SSR1P43307 AL590560.3-201ENST00000623350 461 ntBASIC16.22■□□□□ 0.19
SSR1P43307 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.22■□□□□ 0.19
SSR1P43307 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.22■□□□□ 0.19
SSR1P43307 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.22■□□□□ 0.19
SSR1P43307 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 LINC01101-201ENST00000622953 1884 ntBASIC16.22■□□□□ 0.19
SSR1P43307 FGD5P1-202ENST00000614866 2498 ntBASIC16.22■□□□□ 0.19
SSR1P43307 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SSR1P43307 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SSR1P43307 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR1P43307 AL031595.1-201ENST00000623969 4709 ntBASIC16.21■□□□□ 0.19
SSR1P43307 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.21■□□□□ 0.19
SSR1P43307 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SSR1P43307 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 PTENP1-202ENST00000532280 3996 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms