RNA–Protein interactions for RNA: ENST00000532280.1

PTENP1-202, Transcript of phosphatase and tensin homolog pseudogene 1, humanhuman

BASIC

Gene PTENP1, Length 3,996 nt, Biotype processed transcript, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTENP1-202ENST00000532280 NISCHQ9Y2I1 1504 aa27.2■■□□□ 1.94
PTENP1-202ENST00000532280 SHROOM4Q9ULL8 1493 aa24.72■■□□□ 1.55
PTENP1-202ENST00000532280 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
PTENP1-202ENST00000532280 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
PTENP1-202ENST00000532280 PCGF6Q9BYE7 350 aa23.92■■□□□ 1.42
PTENP1-202ENST00000532280 PPARGC1BQ86YN6 1023 aaKnown RBP23.63■■□□□ 1.37
PTENP1-202ENST00000532280 PELP1Q8IZL8 1130 aaKnown RBP23.49■■□□□ 1.35
PTENP1-202ENST00000532280 HRCP23327 699 aa23.48■■□□□ 1.35
PTENP1-202ENST00000532280 EHMT2Q96KQ7 1210 aa23.27■■□□□ 1.32
PTENP1-202ENST00000532280 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
PTENP1-202ENST00000532280 LOC105371045A0A1W2PR82 267 aa22.95■■□□□ 1.26
PTENP1-202ENST00000532280 ZCCHC6Q5VYS8 1495 aaKnown RBP22.88■■□□□ 1.25
PTENP1-202ENST00000532280 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
PTENP1-202ENST00000532280 FAM9AQ8IZU1 332 aaPredicted RBP22.83■■□□□ 1.25
PTENP1-202ENST00000532280 MYT1Q01538 1121 aa22.72■■□□□ 1.23
PTENP1-202ENST00000532280 YTHDC1Q96MU7 727 aaKnown RBP22.66■■□□□ 1.22
PTENP1-202ENST00000532280 TTBK1Q5TCY1 1321 aaPredicted RBP22.63■■□□□ 1.21
PTENP1-202ENST00000532280 CENPBP07199 599 aaPredicted RBP22.58■■□□□ 1.2
PTENP1-202ENST00000532280 TRIM41Q8WV44 630 aa22.45■■□□□ 1.18
PTENP1-202ENST00000532280 CCDC180Q9P1Z9 1646 aa22.44■■□□□ 1.18
PTENP1-202ENST00000532280 SCAF1Q9H7N4 1312 aaKnown RBP22.43■■□□□ 1.18
PTENP1-202ENST00000532280 ZEB1P37275 1124 aaPredicted RBP22.4■■□□□ 1.18
PTENP1-202ENST00000532280 CCER1Q8TC90 406 aaPredicted RBP22.35■■□□□ 1.17
PTENP1-202ENST00000532280 GTF3C3Q9Y5Q9 886 aa22.35■■□□□ 1.17
PTENP1-202ENST00000532280 TRIM26Q12899 539 aaPredicted RBP22.34■■□□□ 1.17
PTENP1-202ENST00000532280 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
PTENP1-202ENST00000532280 ACIN1Q9UKV3 1341 aaKnown RBP22.02■■□□□ 1.12
PTENP1-202ENST00000532280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.01■■□□□ 1.11
PTENP1-202ENST00000532280 NEUROD1Q13562 356 aa22■■□□□ 1.11
PTENP1-202ENST00000532280 ABCC9O60706 1549 aa21.99■■□□□ 1.11
PTENP1-202ENST00000532280 DIEXFQ68CQ4 756 aaKnown RBP21.93■■□□□ 1.1
PTENP1-202ENST00000532280 DCAF1Q9Y4B6 1507 aa21.91■■□□□ 1.1
PTENP1-202ENST00000532280 RSF1Q96T23 1441 aaPredicted RBP21.83■■□□□ 1.08
PTENP1-202ENST00000532280 ERICH6Q7L0X2 663 aa21.73■■□□□ 1.07
PTENP1-202ENST00000532280 RANGAP1P46060 587 aaPredicted RBP21.72■■□□□ 1.07
PTENP1-202ENST00000532280 UBTFP17480 764 aaKnown RBP21.61■■□□□ 1.05
PTENP1-202ENST00000532280 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
PTENP1-202ENST00000532280 CECR2Q9BXF3 1484 aa21.6■■□□□ 1.05
PTENP1-202ENST00000532280 BCANQ96GW7 911 aa21.57■■□□□ 1.04
PTENP1-202ENST00000532280 PABPN1Q86U42 306 aaKnown RBP eCLIP21.5■■□□□ 1.03
PTENP1-202ENST00000532280 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
PTENP1-202ENST00000532280 HNRNPUL2Q1KMD3 747 aaKnown RBP21.33■■□□□ 1.01
PTENP1-202ENST00000532280 NEFLP07196 543 aa21.31■■□□□ 1
PTENP1-202ENST00000532280 BCL11AQ9H165 835 aa21.27■■□□□ 1
PTENP1-202ENST00000532280 APLP2Q06481 763 aa21.26■□□□□ 0.99
PTENP1-202ENST00000532280 WIZO95785 1651 aa21.21■□□□□ 0.99
PTENP1-202ENST00000532280 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
PTENP1-202ENST00000532280 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
PTENP1-202ENST00000532280 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
PTENP1-202ENST00000532280 MIER1Q8N108 512 aa21.09■□□□□ 0.97
PTENP1-202ENST00000532280 NACADO15069 1562 aa21.06■□□□□ 0.96
PTENP1-202ENST00000532280 SOGA1O94964 1423 aa21.04■□□□□ 0.96
PTENP1-202ENST00000532280 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
PTENP1-202ENST00000532280 ANP32EQ9BTT0 268 aa20.99■□□□□ 0.95
PTENP1-202ENST00000532280 CEP162Q5TB80 1403 aa20.97■□□□□ 0.95
PTENP1-202ENST00000532280 ITGAEP38570 1179 aa20.95■□□□□ 0.94
PTENP1-202ENST00000532280 RUSC2Q8N2Y8 1516 aa20.89■□□□□ 0.93
PTENP1-202ENST00000532280 BAZ1AQ9NRL2 1556 aaPredicted RBP20.87■□□□□ 0.93
PTENP1-202ENST00000532280 FKBP8Q14318 412 aa20.86■□□□□ 0.93
PTENP1-202ENST00000532280 ATP1B4Q9UN42 357 aaPredicted RBP20.81■□□□□ 0.92
PTENP1-202ENST00000532280 CNGB1Q14028 1251 aaPredicted RBP20.8■□□□□ 0.92
PTENP1-202ENST00000532280 TNIKQ9UKE5 1360 aa20.72■□□□□ 0.91
PTENP1-202ENST00000532280 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
PTENP1-202ENST00000532280 SUPT16HQ9Y5B9 1047 aaKnown RBP20.68■□□□□ 0.9
PTENP1-202ENST00000532280 NBR1Q14596 966 aa20.67■□□□□ 0.9
PTENP1-202ENST00000532280 RTL5Q5HYW3 569 aaPredicted RBP20.66■□□□□ 0.9
PTENP1-202ENST00000532280 TOP2AP11388 1531 aaKnown RBP20.65■□□□□ 0.9
PTENP1-202ENST00000532280 CLIP1P30622 1438 aa20.64■□□□□ 0.89
PTENP1-202ENST00000532280 EIF5BO60841 1220 aaKnown RBP20.63■□□□□ 0.89
PTENP1-202ENST00000532280 GOLGA3Q08378 1498 aa20.62■□□□□ 0.89
PTENP1-202ENST00000532280 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
PTENP1-202ENST00000532280 SMARCA2P51531 1590 aa20.58■□□□□ 0.89
PTENP1-202ENST00000532280 IRX6P78412 446 aaPredicted RBP20.57■□□□□ 0.88
PTENP1-202ENST00000532280 TRIM52Q96A61 297 aa20.57■□□□□ 0.88
PTENP1-202ENST00000532280 TSHZ2Q9NRE2 1034 aa20.57■□□□□ 0.88
PTENP1-202ENST00000532280 CDK11AQ9UQ88 783 aaPredicted RBP20.57■□□□□ 0.88
PTENP1-202ENST00000532280 RTN4Q9NQC3 1192 aaKnown RBP20.53■□□□□ 0.88
PTENP1-202ENST00000532280 P3H3Q8IVL6 736 aa20.51■□□□□ 0.87
PTENP1-202ENST00000532280 EEA1Q15075 1411 aa20.49■□□□□ 0.87
PTENP1-202ENST00000532280 CEP164Q9UPV0 1460 aa20.43■□□□□ 0.86
PTENP1-202ENST00000532280 KANK4Q5T7N3 995 aaPredicted RBP20.42■□□□□ 0.86
PTENP1-202ENST00000532280 BAZ1BQ9UIG0 1483 aaKnown RBP20.41■□□□□ 0.86
PTENP1-202ENST00000532280 FAM50AQ14320 339 aaKnown RBP20.41■□□□□ 0.86
PTENP1-202ENST00000532280 RAPGEF2Q9Y4G8 1499 aa20.4■□□□□ 0.86
PTENP1-202ENST00000532280 DDX10Q13206 875 aaKnown RBP20.39■□□□□ 0.85
PTENP1-202ENST00000532280 POLR3GLQ9BT43 218 aa20.37■□□□□ 0.85
PTENP1-202ENST00000532280 RBM19Q9Y4C8 960 aaKnown RBP20.36■□□□□ 0.85
PTENP1-202ENST00000532280 HIRIP3Q9BW71 556 aaPredicted RBP20.35■□□□□ 0.85
PTENP1-202ENST00000532280 NPM2Q86SE8 214 aaKnown RBP20.33■□□□□ 0.84
PTENP1-202ENST00000532280 EIF4G1Q04637 1599 aaKnown RBP20.33■□□□□ 0.84
PTENP1-202ENST00000532280 VPS8Q8N3P4 1428 aa20.32■□□□□ 0.84
PTENP1-202ENST00000532280 PRKCSHP14314 528 aaPredicted RBP20.29■□□□□ 0.84
PTENP1-202ENST00000532280 CCDC136Q96JN2 1154 aa20.29■□□□□ 0.84
PTENP1-202ENST00000532280 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
PTENP1-202ENST00000532280 SYNJ1O43426 1573 aa20.27■□□□□ 0.84
PTENP1-202ENST00000532280 ANP32CO43423 234 aa20.26■□□□□ 0.83
PTENP1-202ENST00000532280 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.25■□□□□ 0.83
PTENP1-202ENST00000532280 ATAD2BQ9ULI0 1458 aa20.25■□□□□ 0.83
PTENP1-202ENST00000532280 DAXXQ9UER7 740 aaPredicted RBP20.24■□□□□ 0.83
PTENP1-202ENST00000532280 DEKP35659 375 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms