RNA–Protein interactions for RNA: ENST00000274963.12

FGD2-201, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD2, Length 3,046 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-201ENST00000274963 NISCHQ9Y2I1 1504 aa31.3■■■□□ 2.6
FGD2-201ENST00000274963 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
FGD2-201ENST00000274963 DCAF8L2P0C7V8 631 aa26.81■■□□□ 1.88
FGD2-201ENST00000274963 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
FGD2-201ENST00000274963 CCDC180Q9P1Z9 1646 aa26.38■■□□□ 1.81
FGD2-201ENST00000274963 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
FGD2-201ENST00000274963 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
FGD2-201ENST00000274963 DCAF1Q9Y4B6 1507 aa25.41■■□□□ 1.66
FGD2-201ENST00000274963 MYO15BQ96JP2 1530 aa25.27■■□□□ 1.64
FGD2-201ENST00000274963 ABCC9O60706 1549 aa25.21■■□□□ 1.63
FGD2-201ENST00000274963 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
FGD2-201ENST00000274963 LOC105371045A0A1W2PR82 267 aa24.98■■□□□ 1.59
FGD2-201ENST00000274963 RSF1Q96T23 1441 aaPredicted RBP24.83■■□□□ 1.57
FGD2-201ENST00000274963 PCGF6Q9BYE7 350 aa24.78■■□□□ 1.56
FGD2-201ENST00000274963 EHMT2Q96KQ7 1210 aa24.7■■□□□ 1.55
FGD2-201ENST00000274963 FAM9AQ8IZU1 332 aaPredicted RBP24.69■■□□□ 1.54
FGD2-201ENST00000274963 TRIM41Q8WV44 630 aa24.64■■□□□ 1.54
FGD2-201ENST00000274963 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.54
FGD2-201ENST00000274963 NACADO15069 1562 aa24.6■■□□□ 1.53
FGD2-201ENST00000274963 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
FGD2-201ENST00000274963 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
FGD2-201ENST00000274963 HRCP23327 699 aa24.39■■□□□ 1.49
FGD2-201ENST00000274963 PABPN1Q86U42 306 aaKnown RBP eCLIP24.3■■□□□ 1.48
FGD2-201ENST00000274963 WIZO95785 1651 aa24.27■■□□□ 1.48
FGD2-201ENST00000274963 PPARGC1BQ86YN6 1023 aaKnown RBP24.21■■□□□ 1.47
FGD2-201ENST00000274963 TRIM26Q12899 539 aaPredicted RBP24.09■■□□□ 1.45
FGD2-201ENST00000274963 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
FGD2-201ENST00000274963 CCDC88BA6NC98 1476 aa23.83■■□□□ 1.41
FGD2-201ENST00000274963 UNC13AQ9UPW8 1703 aa23.83■■□□□ 1.41
FGD2-201ENST00000274963 SMARCA4P51532 1647 aa23.83■■□□□ 1.4
FGD2-201ENST00000274963 ABCC8Q09428 1581 aa23.8■■□□□ 1.4
FGD2-201ENST00000274963 TTBK1Q5TCY1 1321 aaPredicted RBP23.8■■□□□ 1.4
FGD2-201ENST00000274963 TOP2AP11388 1531 aaKnown RBP23.75■■□□□ 1.39
FGD2-201ENST00000274963 SMARCA2P51531 1590 aa23.66■■□□□ 1.38
FGD2-201ENST00000274963 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
FGD2-201ENST00000274963 SOGA1O94964 1423 aa23.6■■□□□ 1.37
FGD2-201ENST00000274963 UBTFP17480 764 aaKnown RBP23.59■■□□□ 1.37
FGD2-201ENST00000274963 EIF4G1Q04637 1599 aaKnown RBP23.58■■□□□ 1.36
FGD2-201ENST00000274963 RUSC2Q8N2Y8 1516 aa23.49■■□□□ 1.35
FGD2-201ENST00000274963 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
FGD2-201ENST00000274963 RANGAP1P46060 587 aaPredicted RBP23.46■■□□□ 1.35
FGD2-201ENST00000274963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.42■■□□□ 1.34
FGD2-201ENST00000274963 ATAD2BQ9ULI0 1458 aa23.37■■□□□ 1.33
FGD2-201ENST00000274963 ZEB1P37275 1124 aaPredicted RBP23.37■■□□□ 1.33
FGD2-201ENST00000274963 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
FGD2-201ENST00000274963 BAZ1BQ9UIG0 1483 aaKnown RBP23.35■■□□□ 1.33
FGD2-201ENST00000274963 CEP162Q5TB80 1403 aa23.33■■□□□ 1.33
FGD2-201ENST00000274963 CCER1Q8TC90 406 aaPredicted RBP23.3■■□□□ 1.32
FGD2-201ENST00000274963 TNIKQ9UKE5 1360 aa23.22■■□□□ 1.31
FGD2-201ENST00000274963 PEG3Q9GZU2 1588 aa23.2■■□□□ 1.3
FGD2-201ENST00000274963 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
FGD2-201ENST00000274963 EEA1Q15075 1411 aa23.14■■□□□ 1.29
FGD2-201ENST00000274963 GOLGA3Q08378 1498 aa23.11■■□□□ 1.29
FGD2-201ENST00000274963 HNRNPUL2Q1KMD3 747 aaKnown RBP23.02■■□□□ 1.28
FGD2-201ENST00000274963 APLP2Q06481 763 aa22.98■■□□□ 1.27
FGD2-201ENST00000274963 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
FGD2-201ENST00000274963 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
FGD2-201ENST00000274963 CLIP1P30622 1438 aa22.97■■□□□ 1.27
FGD2-201ENST00000274963 NCAPD3P42695 1498 aa22.87■■□□□ 1.25
FGD2-201ENST00000274963 TOP2BQ02880 1626 aa22.78■■□□□ 1.24
FGD2-201ENST00000274963 KIF21BO75037 1637 aa22.77■■□□□ 1.23
FGD2-201ENST00000274963 PELP1Q8IZL8 1130 aaKnown RBP22.75■■□□□ 1.23
FGD2-201ENST00000274963 VPS8Q8N3P4 1428 aa22.73■■□□□ 1.23
FGD2-201ENST00000274963 CUX1P39880 1505 aa22.72■■□□□ 1.23
FGD2-201ENST00000274963 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
FGD2-201ENST00000274963 CFTRP13569 1480 aa22.67■■□□□ 1.22
FGD2-201ENST00000274963 DIEXFQ68CQ4 756 aaKnown RBP22.65■■□□□ 1.22
FGD2-201ENST00000274963 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
FGD2-201ENST00000274963 KANK4Q5T7N3 995 aaPredicted RBP22.65■■□□□ 1.22
FGD2-201ENST00000274963 PRXQ9BXM0 1461 aa22.6■■□□□ 1.21
FGD2-201ENST00000274963 ITGAEP38570 1179 aa22.59■■□□□ 1.21
FGD2-201ENST00000274963 BIVM-ERCC5R4GMW8 1640 aa22.59■■□□□ 1.21
FGD2-201ENST00000274963 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
FGD2-201ENST00000274963 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
FGD2-201ENST00000274963 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
FGD2-201ENST00000274963 CUX2O14529 1486 aa22.55■■□□□ 1.2
FGD2-201ENST00000274963 ARAP1Q96P48 1450 aa22.5■■□□□ 1.19
FGD2-201ENST00000274963 IGF1RP08069 1367 aa22.47■■□□□ 1.19
FGD2-201ENST00000274963 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.19
FGD2-201ENST00000274963 ZNF316A6NFI3 1004 aaPredicted RBP22.45■■□□□ 1.18
FGD2-201ENST00000274963 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
FGD2-201ENST00000274963 ERICH3Q5RHP9 1530 aa22.44■■□□□ 1.18
FGD2-201ENST00000274963 FGD5Q6ZNL6 1462 aa22.41■■□□□ 1.18
FGD2-201ENST00000274963 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
FGD2-201ENST00000274963 DNAJC5BQ9UF47 199 aa22.4■■□□□ 1.18
FGD2-201ENST00000274963 NESP48681 1621 aa22.38■■□□□ 1.17
FGD2-201ENST00000274963 YTHDC1Q96MU7 727 aaKnown RBP22.36■■□□□ 1.17
FGD2-201ENST00000274963 ARHGAP35Q9NRY4 1499 aa22.36■■□□□ 1.17
FGD2-201ENST00000274963 FANCD2Q9BXW9 1451 aa22.35■■□□□ 1.17
FGD2-201ENST00000274963 NEUROD1Q13562 356 aa22.34■■□□□ 1.17
FGD2-201ENST00000274963 RAD54L2Q9Y4B4 1467 aa22.33■■□□□ 1.17
FGD2-201ENST00000274963 ACIN1Q9UKV3 1341 aaKnown RBP22.25■■□□□ 1.15
FGD2-201ENST00000274963 FAM50AQ14320 339 aaKnown RBP22.24■■□□□ 1.15
FGD2-201ENST00000274963 MIER1Q8N108 512 aa22.23■■□□□ 1.15
FGD2-201ENST00000274963 CCNB3Q8WWL7 1395 aa22.2■■□□□ 1.14
FGD2-201ENST00000274963 DHX57Q6P158 1386 aaKnown RBP22.18■■□□□ 1.14
FGD2-201ENST00000274963 TDRD9Q8NDG6 1382 aaKnown RBP22.17■■□□□ 1.14
FGD2-201ENST00000274963 CENPBP07199 599 aaPredicted RBP22.17■■□□□ 1.14
FGD2-201ENST00000274963 POLA1P09884 1462 aaPredicted RBP22.14■■□□□ 1.13
FGD2-201ENST00000274963 FHOD3Q2V2M9 1422 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 327 ms